FFCP PHASE1:Hg19::chr15:78913665..78913673,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1136 | |EntrezGene=1136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1957 | |HGNC=1957 | ||
|TSSclassifier=strong | |||
|UniProt=P32297 | |UniProt=P32297 | ||
|association_with_transcript=-28bp_to_ENST00000348639,NM_000743,NM_001166694_5end | |association_with_transcript=-28bp_to_ENST00000348639,NM_000743,NM_001166694_5end | ||
|cluster_id=chr15:78913665..78913673,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_9_at_CHRNA3_5end | |description=CAGE_peak_9_at_CHRNA3_5end | ||
|id=chr15:78913665..78913673,- | |id=chr15:78913665..78913673,- | ||
|ontology_enrichment_celltype=CL:0002586!2.05e-07!3 | |ontology_enrichment_celltype=CL:0002586!2.05e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.96e-34;3 | |||
|ontology_enrichment_disease=DOID:169!1.61e-27!6;DOID:171!8.12e-17!10;DOID:3095!5.52e-08!22;DOID:2994!5.52e-08!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.89e-37!2;UBERON:0002757!1.89e-37!2;UBERON:0010134!1.89e-37!2;UBERON:0002784!1.89e-37!2;UBERON:0005408!1.89e-37!2;UBERON:0001899!1.89e-37!2;UBERON:0000013!7.44e-33!5;UBERON:0002410!7.44e-33!5;UBERON:0003296!2.71e-19!4;UBERON:0010133!2.71e-19!4;UBERON:0000010!1.32e-18!8;UBERON:0000966!1.21e-15!5;UBERON:0005388!1.21e-15!5;UBERON:0001802!1.21e-15!5;UBERON:0000073!1.68e-11!94;UBERON:0001016!1.68e-11!94;UBERON:0001894!1.87e-11!7;UBERON:0006222!1.87e-11!7;UBERON:0001255!3.27e-10!2;UBERON:0001556!3.27e-10!2;UBERON:0001781!2.05e-07!3;UBERON:0001782!2.05e-07!3;UBERON:0005424!2.05e-07!3;UBERON:0007023!2.35e-07!115;UBERON:0001896!2.97e-07!3;UBERON:0005290!2.97e-07!3;UBERON:0010096!2.97e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.74e-50;2!UBERON:0002757;2.74e-50;2!UBERON:0010134;2.74e-50;2!UBERON:0005408;2.74e-50;2!UBERON:0001899;2.74e-50;2!UBERON:0003296;5.56e-26;4!UBERON:0010133;5.56e-26;4!UBERON:0002784;5.56e-26;4!UBERON:0000966;5.15e-21;5!UBERON:0005388;5.15e-21;5!UBERON:0001802;5.15e-21;5!UBERON:0001894;1.65e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.74e-50,2;UBERON:0002757,2.74e-50,2;UBERON:0010134,2.74e-50,2;UBERON:0005408,2.74e-50,2;UBERON:0001899,2.74e-50,2;UBERON:0003296,5.56e-26,4;UBERON:0010133,5.56e-26,4;UBERON:0002784,5.56e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0001894,1.65e-15,7;UBERON:0006222,1.65e-15,7;UBERON:0003056,1.20e-07,61 | |||
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|short_description=p9@CHRNA3 | |short_description=p9@CHRNA3 | ||
}} | }} |
Latest revision as of 07:15, 19 September 2015
Short description: | p9@CHRNA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CHRNA3_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -28bp_to_ENST00000348639, NM_000743, NM_001166694_5end |
EntrezGene: | CHRNA3 |
HGNC: | 1957 |
UniProt: | P32297 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.74e-50 | 2 |
regional part of epithalamus | 2.74e-50 | 2 |
secretory circumventricular organ | 2.74e-50 | 2 |
circumventricular organ | 2.74e-50 | 2 |
epithalamus | 2.74e-50 | 2 |
gland of diencephalon | 5.56e-26 | 4 |
neuroendocrine gland | 5.56e-26 | 4 |
regional part of diencephalon | 5.56e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
diencephalon | 1.65e-15 | 7 |
future diencephalon | 1.65e-15 | 7 |
pre-chordal neural plate | 1.20e-07 | 61 |