FFCP PHASE1:Hg19::chr17:27045488..27045508,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83871 | |EntrezGene=83871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16519 | |HGNC=16519 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBG0 | |UniProt=C9JBG0 | ||
|association_with_transcript=-41bp_to_ENST00000412625_5end | |association_with_transcript=-41bp_to_ENST00000412625_5end | ||
|cluster_id=chr17:27045488..27045508,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_12_at_RAB34_5end | |description=CAGE_peak_12_at_RAB34_5end | ||
|id=chr17:27045488..27045508,- | |id=chr17:27045488..27045508,- | ||
|ontology_enrichment_celltype=CL:0000055!3.61e-10!180;CL:0000393!6.70e-10!60;CL:0000211!6.70e-10!60;CL:0000183!4.39e-09!59;CL:0000187!1.12e-08!54;CL:0000359!1.28e-08!32;CL:0000680!1.23e-07!57;CL:0000056!1.23e-07!57;CL:0000355!1.23e-07!57;CL:0000192!1.70e-07!42;CL:0000514!1.70e-07!42 | |ontology_enrichment_celltype=CL:0000055!3.61e-10!180;CL:0000393!6.70e-10!60;CL:0000211!6.70e-10!60;CL:0000183!4.39e-09!59;CL:0000187!1.12e-08!54;CL:0000359!1.28e-08!32;CL:0000680!1.23e-07!57;CL:0000056!1.23e-07!57;CL:0000355!1.23e-07!57;CL:0000192!1.70e-07!42;CL:0000514!1.70e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.69e-19;5!CL:0000784;4.82e-11;3!CL:0000039;7.46e-09;7!CL:0000586;7.46e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.42e-19,5;CL:0000784,6.51e-11,3;CL:0000039,6.44e-09,7;CL:0000586,6.44e-09,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.64e-08;8!UBERON:0002370;1.10e-07;2!UBERON:0005058;1.10e-07;2!UBERON:0009113;1.10e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.49e-08,8 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0.331397375727916,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0.123121058076788,0.612002073732759,0.313454721478088,0.572471974262113,0.547497700291537,0,0.764134057479513,0.328402357799783,0.550975469195755,0,0,0,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.419317291016752,0,0.150176892841506,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,2.64342657158052,1.68152568894461,2.10707267820062,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.351339142772504,0.0654895377488563,0,0,0,0,0,1.19245312152671,1.14398982156026,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.633152558322899,0,0,0.354668382198357,0,2.1349799145941,0.24666754841716,0,0.269421344139376,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0.567160915800105,0.179389635688862,0,0,0.600182192168805,0.206105058476878,0,0,0.168776332241266,0.487185025805993,0.504867548488229,0.0920498986422993,0.646584227275248,0,0.403008392910561,0.508681776931463,0,0,0,2.92736894711029,3.31324420803713,3.60201222895507,2.17688215532278,5.2987378683882,4.01475094983413,1.56449532329816,0,0,0.464367928031979,1.44375896333917,0,0.168584690078102,0,0,0,0,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,0.414656231081544,0,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,1.50171528921959,0,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0,0.468565659970853,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.979005787313703,0.686286847621712,0,0,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.275673144969061,0.537101224341368,0,0.170453254832202,0,0,0.192190067365106,0.255225424989168,0,0.464845549297286,0.31481234683064,0,0.924100740528266,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0.359744915166629,0,0,0.404364963146632,1.58510321173008,1.26377536871694,0.975267478179181,0.487426979262569,0,0.272999822815972,0.424216295861138,1.13008116620243,0,1.99031692572366,0.876901770507525,0,0,0.811641507850816,0.92947049429925,2.25356482025793,0.143411352204052,0,0.35667105148125,0,0,0,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,2.88743956579008,0,0,1.15415370381156,2.63224820389132,0,0.997896857164083,0,0.635020748171649,0.973865820823666,3.93116049358842,1.59764275323235,0,0,1.52362600021443,0.481764225311099,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,1.09224469574562,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,2.32237948940793,0.19924798825107,0.276283915531148,0.251932747854276,1.22722419002586,0,0,0.179736702294654,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.461701551022782,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0.476809736941136,0.421996129056054,0.489698424477443,0.141353071433941,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0.789168805698781,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0.284609546029793,0.277349346026277,3.64475450503775,0,0.0870592065804026,0.17472666824203,0.51595809741485,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0,0,0.596143835108969,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0.229073192331831,0,0,0,0,0,0.104602846312333,0.407992870545287,0.288950589901519,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,7.39464482939088,8.1148267592368,10.8014487887588,0,0,0,0,0,0.577000469484979,0.105600336519406,0.35857467866569,0,0,0,0.76280561296425,0,0,0,1.19730191562487,0,0.681552087141687,0.113312091520126,0,0,0,0,0.513260513652988,0.704815022316672,0.3203622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| ||
|short_description=p12@RAB34 | |short_description=p12@RAB34 | ||
}} | }} |
Latest revision as of 07:11, 19 September 2015
Short description: | p12@RAB34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RAB34_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -41bp_to_ENST00000412625_5end |
EntrezGene: | RAB34 |
HGNC: | 16519 |
UniProt: | C9JBG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.42e-19 | 5 |
plasmacytoid dendritic cell | 6.51e-11 | 3 |
germ line cell | 6.44e-09 | 7 |
germ cell | 6.44e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 8.49e-08 | 8 |