FFCP PHASE1:Hg19::chr17:27044903..27044912,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:27044903..27044912,- to FFCP PHASE1:Hg19::chr17:27044903..27044912,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83871 | |EntrezGene=83871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16519 | |HGNC=16519 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZG1 | |UniProt=Q9BZG1 | ||
|association_with_transcript=0bp_to_ENST00000395245,NM_001144942,NM_031934,uc002hce.2,uc002hcf.2,uc002hcg.2_5end | |||
|cluster_id=chr17:27044903..27044912,- | |||
|description=CAGE_peak_13_at_RAB34_5end | |||
|id=chr17:27044903..27044912,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.49e-08;19!CL:0002577;1.64e-07;3!CL:0002567;3.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.43e-08,19;CL:0002577,1.71e-07,3;CL:0002567,3.37e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.07e-07!14;UBERON:0000158!8.07e-07!14 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.08e-08,14;UBERON:0000158,4.08e-08,14 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.737201809504527,0.697801167972428,0.873765488520689,1.05506791291381,0.123766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0.309632246632152,1.83884244895785,0.90361775633475,0.369754010166788,0,0,0.293600439334847,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0.724232594804119,0,0,0.0945348171640679,0,0.351339142772504,0.0654895377488563,0.728590576585084,0.741568885568859,0.324547393654683,0,0.398873881556595,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,1.62028389576352,0.714397826272638,0,0,0,0,0.549605231791222,0,0,0,0,0.633152558322899,0.397227542439656,0.286836620748814,0.354668382198357,1.12135520028461,0,0.24666754841716,0,0.269421344139376,0,0,0.576175924479999,0.468642863667593,0,0,0,0.587172493218824,0,0.140450806702248,0.204154171254893,0.737005903870608,0.413303124703062,1.18800285728205,1.48360157567134,0,0.718618141816238,0.673344455816265,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0.45071417671979,0.226864366320042,0,0.427114777637135,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0.506328996723799,0.194874010322397,0,0.276149695926898,0.484938170456436,0,0.503760491138201,0.339121184620975,0.193260853163297,0.818238361772504,0.573609190778008,0.487894824518382,0,0,0.10366105501537,0,0,3.12899064659632,0,0,0,2.16563844500876,0.709840800239063,0.505754070234305,0.482022059766964,0.882351781859152,0.871517776369625,0.949082476444386,0.808987848960987,0.98110732562673,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,1.1240175325762,0.201057944823262,0.370353780634118,0,1.03993478527958,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0.738651018262192,0.234004265139238,0,0.93733833986777,0.16798212819886,0.425325291727159,0.268675568108545,0.581267877027924,0,0,0.176096868026452,0.621984346622316,0.576479813667846,0.37872730027914,0.380987365753014,0,1.17217447210047,3.4214489204541,0.925447434329912,0.901029173531752,0.571652865261156,0,0,0.2933531432838,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0.823240336780769,0.65147236858747,1.06617584622764,0,0.602878754119172,0,0.599837947092342,0,0.502257091432126,0,0,1.14861935834114,0,0.579125226670317,0.410952645100767,0.716243852959582,0,0,0,0,0,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.356857977594324,0.473107245101804,0.585707074963566,0,0,0,0,0,0.347534457872331,0.391602314925481,0,0,0,0.213455115606889,0.909382714338778,6.65741758041988,2.11673205330776,0.248107807818777,0.306923946576125,0.841980283299221,1.02511319404561,0.511707249066704,0.160853921143607,1.48418066444991,0.308419387605311,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0.601519410909855,0.276242966807689,0.114814448164607,0.364182336013434,0.131124414959424,0,0.15403067420883,0.784349769176855,1.46139224653261,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.206082023295445,0.732555718546747,0.247528499761764,1.72279661398852,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0,0.214840489736547,0.145016693914229,0.596586391912706,0.0890320356467374,0.495854746082934,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0.744316738719335,0,0,0.767693373934002,0,0.636406495851874,0,0.539617372749944,0,0.471249609382746,0.606547444719948,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,1.10273068709225,0.66343897524122,0.876901770507525,0,0.655894752046633,0.608731130888112,0,0,0.143411352204052,0.392996164052485,0,0.709522128141196,1.05553817648832,0,0,1.04980416073495,0.192444225451024,0,1.08890984861323,0.0941438007767792,0.43050537267123,1.68471475667626,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0.280797178113459,0,0,0,0.338583555603207,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0.606802608747567,0,0.284136146806413,1.43246690842614,1.48482340416319,0.614321404198464,0,0.281338832821026,0.111308705022906,0.329607748453519,0,0.398495976502139,0.27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| ||
|short_description=p13@RAB34 | |||
}} | }} |
Latest revision as of 07:09, 19 September 2015
Short description: | p13@RAB34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RAB34_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395245, NM_001144942, NM_031934, uc002hce.2, uc002hcf.2, uc002hcg.2_5end |
EntrezGene: | RAB34 |
HGNC: | 16519 |
UniProt: | Q9BZG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.43e-08 | 19 |
placental epithelial cell | 1.71e-07 | 3 |
light melanocyte | 3.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.08e-08 | 14 |
membranous layer | 4.08e-08 | 14 |