FFCP PHASE1:Hg19::chr19:49631859..49631871,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8541 | |EntrezGene=8541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9247 | |HGNC=9247 | ||
|TSSclassifier=strong | |||
|UniProt=O75145 | |UniProt=O75145 | ||
|association_with_transcript=-233bp_to_uc002pms.2_5end | |association_with_transcript=-233bp_to_uc002pms.2_5end | ||
|cluster_id=chr19:49631859..49631871,+ | |||
|description=CAGE_peak_7_at_PPFIA3_5end | |description=CAGE_peak_7_at_PPFIA3_5end | ||
|id=chr19:49631859..49631871,+ | |id=chr19:49631859..49631871,+ | ||
|ontology_enrichment_celltype=CL:0000148!2.26e-07!10;CL:0000541!2.26e-07!10 | |ontology_enrichment_celltype=CL:0000148!2.26e-07!10;CL:0000541!2.26e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.33e-12;10!CL:0002567;6.49e-11;3!CL:0000147;1.23e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.44e-12,10;CL:0000541,2.44e-12,10;CL:0002567,1.06e-10,3;CL:0000147,1.27e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.51e-23!235;DOID:14566!2.01e-22!239;DOID:0050687!1.28e-19!143;DOID:305!1.07e-11!106;DOID:0050686!6.17e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.16e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.51e-15,143;DOID:162,3.55e-12,235;DOID:14566,9.62e-12,239;DOID:1909,2.51e-08,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;3.59e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.90e-08,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,2.1349799145941,0,0.311211035399766,0,0,0.756787138224657,0,0,0,0,0,0,0,0.140450806702248,0,0,0,1.18800285728205,0,0,0,0,0.500474079487857,0,0,0.612975591598039,0,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0,0.843881661206331,0.876933046450788,0,0,0,0,0,0.339121184620975,0,0,0,0,0.132529768321485,0.580969714347592,0.621966330092223,0,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0.686271241194102,0,0,0.100528972411631,0.185176890317059,0.325808305310325,0,1.44331342025273,0.34779121492523,0.821860859650752,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,1.96843472305724,1.14596527667483,1.17217447210047,1.71072446022705,0.719792448923265,3.00343057843917,3.14409075893636,0.784917590417525,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,1.57275793023962,0.542621605391443,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0.300946099727719,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,1.73981983154852,3.30037999682352,0,0,0,0,0.154048617114644,0,0.137836572484531,0.214840489736547,0.290033387828457,0,0.178064071293475,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,1.3940745403212,0,0,0,0,0,1.116475108079,0,0,0.255897791311334,0,0,0,0.359744915166629,0.274537029736055,0,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0.281695602532241,0.286822704408103,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,1.47024129588619,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,1.05836791361941,0.324621940274555,0,0.228234679033192,0.156679895773023,2.50634477090067,0.169291777801603,0.1605880751037,0,0,0.687010689511529,1.22896305723383,0.671028323677248,1.33479313369527,0,0.278406173895242,0,0.540911356951966,0,0,3.7428108081644,0,0.121360521749513,0.222886768554957,0,0,0,0,0.994147647766298,0,0.111308705022906,0.659215496907038,0,0,0,0,0,0,1.24415835064723,0,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.0874599999961957,1.44999915086959,0.568967241427498,5.59358030644086,1.89110145414349,0.689486746482929,12.5389983754799,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0.21787692703798,0,0,0.455768223388005,1.84451123510448,0.628303510868405,1.19512109114209,0,0.183195186803725,0,0,0.156980256395025,0.332423363800313,0.451191321234361,0.784250137270958,0.503464760927528,0.75901493089674,0.158936578980379,0.210998064528027,0.489698424477443,0.282706142867882,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0.60129367765797,0.103688191397247,0,0.330991955875499,0,0,8.25367683486399,0.277349346026277,0.520679215005393,0.391969589657511,0,0,1.37588825977293,0.290268993867255,0.0730893170861856,0.164230914106418,0,0,0.451961481561065,0.411125773940253,0,0,2.54216797555244,0.320635281006135,0.213452994739353,1.19885765749278,0,0.114536596165916,0.343189995723929,0.14405479798815,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.472699093843342,0.329663433524666,0.202210631562555,0.984274815147488,0,0.795229689809303,0.136203406111576,0.803765742325096,0.687697182986169,0.83088067605837,0,0,0,0,0.0788057072991982,0.0524545881349981,4.01281278773745,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.679872549120754,0,0,0.129282956361551,0,0,0,0,0,0,1.48849806543585,0.592834895693833,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.276697269872462,0,1.36484205787483,5.42384133735438,0,0,0.434763085832475,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,1.04349012362347,0,0.761610424337591,0.406870733204662,0,0,0.464033759878494,0.398095888698616,0,0,0,0,2.69667762570225,0,0,0,0,0.97894681802587,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0.327130788511688,0.655219697692825,3.68659363130579,0,0,0.320075189082423,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0.109209638192014,0.169732529954025,1.91317428091515,5.5771093916551,2.79322458986622,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,1.42769420259154,0,0.11796972334774,0.183428598521679,0,0.381382095467167,0,2.78482710962785,0.0752103283492573,6.85797233591968,0,1.83334686136996,0.655087670040387,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0.351742488719241,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0.236387681767936,0.111231401892069,0.078493092850514,0,2.24217730651031,0,1.29556554731173,2.38875843943525,0.428859265059938,0.158013611732727,2.44106993273063,3.47716544605159,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0,0,1.96251696636676,0,0,2.35158648180761,0,1.64973582971138,0,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,1.60698544745092,0,0.160482733378337,0,0,0,2.36657343289777,0,0,0,0,0,0.432626562123789,0.252332849670158,0.109265571963696,0.886889507080059,0.101988829741982,0,0.18378979906969,0,0,0,0.829169439458779,0,0,0,0.839655827868079,0.434523000071005,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0.628776414746108,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,2.1349799145941,0,0.311211035399766,0,0,0.756787138224657,0,0,0,0,0,0,0,0.140450806702248,0,0,0,1.18800285728205,0,0,0,0,0.500474079487857,0,0,0.612975591598039,0,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0,0.843881661206331,0.876933046450788,0,0,0,0,0,0.339121184620975,0,0,0,0,0.132529768321485,0.580969714347592,0.621966330092223,0,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0.686271241194102,0,0,0.100528972411631,0.185176890317059,0.325808305310325,0,1.44331342025273,0.34779121492523,0.821860859650752,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,1.96843472305724,1.14596527667483,1.17217447210047,1.71072446022705,0.719792448923265,3.00343057843917,3.14409075893636,0.784917590417525,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,1.57275793023962,0.542621605391443,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0.300946099727719,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,1.73981983154852,3.30037999682352,0,0,0,0,0.154048617114644,0,0.137836572484531,0.214840489736547,0.290033387828457,0,0.178064071293475,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,1.3940745403212,0,0,0,0,0,1.116475108079,0,0,0.255897791311334,0,0,0,0.359744915166629,0.274537029736055,0,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0.281695602532241,0.286822704408103,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,1.47024129588619,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,1.05836791361941,0.324621940274555,0,0.228234679033192,0.156679895773023,2.50634477090067,0.169291777801603,0.1605880751037,0,0,0.687010689511529,1.22896305723383,0.671028323677248,1.33479313369527,0,0.278406173895242,0,0.540911356951966,0,0,3.7428108081644,0,0.121360521749513,0.222886768554957,0,0,0,0,0.994147647766298,0,0.111308705022906,0.659215496907038,0,0,0,0,0,0,1.24415835064723,0,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.0874599999961957,1.44999915086959,0.568967241427498,5.59358030644086,1.89110145414349,0.689486746482929,12.5389983754799,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0.21787692703798,0,0,0.455768223388005,1.84451123510448,0.628303510868405,1.19512109114209,0,0.183195186803725,0,0,0.156980256395025,0.332423363800313,0.451191321234361,0.784250137270958,0.503464760927528,0.75901493089674,0.158936578980379,0.210998064528027,0.489698424477443,0.282706142867882,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0.60129367765797,0.103688191397247,0,0.330991955875499,0,0,8.25367683486399,0.277349346026277,0.520679215005393,0.391969589657511,0,0,1.37588825977293,0.290268993867255,0.0730893170861856,0.164230914106418,0,0,0.451961481561065,0.411125773940253,0,0,2.54216797555244,0.320635281006135,0.213452994739353,1.19885765749278,0,0.114536596165916,0.343189995723929,0.14405479798815,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.472699093843342,0.329663433524666,0.202210631562555,0.984274815147488,0,0.795229689809303,0.136203406111576,0.803765742325096,0.687697182986169,0.83088067605837,0,0,0,0,0.0788057072991982,0.0524545881349981,4.01281278773745,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.679872549120754,0,0,0.129282956361551,0,0,0,0,0,0,1.48849806543585,0.592834895693833,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.276697269872462,0,1.36484205787483,5.42384133735438,0,0,0.434763085832475,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,1.04349012362347,0,0.761610424337591,0.406870733204662,0,0,0.464033759878494,0.398095888698616,0,0,0,0,2.69667762570225,0,0,0,0,0.97894681802587,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0.327130788511688,0.655219697692825,3.68659363130579,0,0,0.320075189082423,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0.109209638192014,0.169732529954025,1.91317428091515,5.5771093916551,2.79322458986622,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,1.42769420259154,0,0.11796972334774,0.183428598521679,0,0.381382095467167,0,2.78482710962785,0.0752103283492573,6.85797233591968,0,1.83334686136996,0.655087670040387,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0.351742488719241,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0.236387681767936,0.111231401892069,0.078493092850514,0,2.24217730651031,0,1.29556554731173,2.38875843943525,0.428859265059938,0.158013611732727,2.44106993273063,3.47716544605159,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0,0,1.96251696636676,0,0,2.35158648180761,0,1.64973582971138,0,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,1.60698544745092,0,0.160482733378337,0,0,0,2.36657343289777,0,0,0,0,0,0.432626562123789,0.252332849670158,0.109265571963696,0.886889507080059,0.101988829741982,0,0.18378979906969,0,0,0,0.829169439458779,0,0,0,0.839655827868079,0.434523000071005,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0.628776414746108,0,0,0,0,0,0 | ||
|short_description=p7@PPFIA3 | |short_description=p7@PPFIA3 | ||
}} | }} |
Latest revision as of 06:20, 19 September 2015
Short description: | p7@PPFIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PPFIA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -233bp_to_uc002pms.2_5end |
EntrezGene: | PPFIA3 |
HGNC: | 9247 |
UniProt: | O75145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.44e-12 | 10 |
melanoblast | 2.44e-12 | 10 |
light melanocyte | 1.06e-10 | 3 |
pigment cell | 1.27e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.90e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.51e-15 | 143 |
cancer | 3.55e-12 | 235 |
disease of cellular proliferation | 9.62e-12 | 239 |
melanoma | 2.51e-08 | 2 |