FFCP PHASE1:Hg19::chr19:49622936..49622960,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49622936..49622960,+
|short_description=p12@PPFIA3
|description=CAGE_peak_12_at_PPFIA3_5end
|association_with_transcript=273bp_to_ENST00000334186,NM_00366...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8541 | |EntrezGene=8541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9247 | |HGNC=9247 | ||
|TSSclassifier=strong | |||
|UniProt=O75145 | |UniProt=O75145 | ||
|association_with_transcript=273bp_to_ENST00000334186,NM_003660,uc002pmr.2,uc010yai.1_5end | |||
|cluster_id=chr19:49622936..49622960,+ | |||
|description=CAGE_peak_12_at_PPFIA3_5end | |||
|id=chr19:49622936..49622960,+ | |||
|ontology_enrichment_celltype=CL:0000453!9.91e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.76e-12;2!CL:0001016;1.76e-12;2!CL:0000167;3.89e-07;1!CL:0000164;3.89e-07;1!CL:0000502;3.89e-07;1!CL:0000172;3.89e-07;1!CL:0000173;3.89e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.67e-12,2;CL:0001016,1.67e-12,2;CL:0000167,5.06e-07,1;CL:0000164,5.06e-07,1;CL:0000502,5.06e-07,1;CL:0000172,5.06e-07,1;CL:0000173,5.06e-07,1;CL:0002351,5.06e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.34e-18;3!UBERON:0006601;1.01e-11;82!CL:0002351;3.89e-07;1!UBERON:0000358;3.89e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;3.89e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.06e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;6.37e-49;20!UBERON:0002619;2.03e-44;22!UBERON:0000956;5.85e-39;25!UBERON:0000203;5.85e-39;25!UBERON:0000200;9.72e-33;6!UBERON:0002780;5.94e-31;41!UBERON:0001890;5.94e-31;41!UBERON:0000073;7.90e-31;53!UBERON:0002616;7.90e-31;53!UBERON:0001869;1.14e-29;32!UBERON:0001893;2.65e-28;34!UBERON:0002791;4.23e-26;32!UBERON:0003528;5.83e-24;34!UBERON:0002020;5.83e-24;34!UBERON:0003296;2.12e-23;4!UBERON:0010133;2.12e-23;4!UBERON:0001894;1.55e-20;7!UBERON:0001017;2.08e-19;75!UBERON:0000955;6.05e-19;68!UBERON:0001870;2.90e-17;3!UBERON:0001016;1.10e-16;83!UBERON:0002784;2.28e-13;4!UBERON:0000007;5.88e-13;2!UBERON:0001871;1.28e-12;6!UBERON:0001905;3.21e-12;2!UBERON:0002702;3.21e-12;2!UBERON:0002757;3.21e-12;2!UBERON:0010134;3.21e-12;2!UBERON:0005408;3.21e-12;2!UBERON:0001899;3.21e-12;2!UBERON:0002771;7.65e-12;2!UBERON:0007023;2.78e-11;114!UBERON:0002021;5.08e-11;5!UBERON:0001872;8.55e-11;5!UBERON:0002680;2.34e-10;9!UBERON:0001895;2.34e-10;9!UBERON:0002037;2.73e-09;6!UBERON:0011216;2.89e-08;132!UBERON:0004733;8.69e-08;12!UBERON:0002028;8.69e-08;12!UBERON:0004732;3.42e-07;13!UBERON:0002581;3.89e-07;1!UBERON:0002902;3.89e-07;1!UBERON:0009899;3.89e-07;1!UBERON:0002022;9.50e-07;1!UBERON:0007190;9.50e-07;1 | |||
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| ||
|short_description=p12@PPFIA3 | |||
}} | }} |
Latest revision as of 06:19, 19 September 2015
Short description: | p12@PPFIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PPFIA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 273bp_to_ENST00000334186, NM_003660, uc002pmr.2, uc010yai.1_5end |
EntrezGene: | PPFIA3 |
HGNC: | 9247 |
UniProt: | O75145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.67e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.67e-12 | 2 |
peptide hormone secreting cell | 5.06e-07 | 1 |
enteroendocrine cell | 5.06e-07 | 1 |
type D enteroendocrine cell | 5.06e-07 | 1 |
somatostatin secreting cell | 5.06e-07 | 1 |
pancreatic D cell | 5.06e-07 | 1 |
progenitor cell of endocrine pancreas | 5.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.06e-07 | 1 |