FFCP PHASE1:Hg19::chr6:51952347..51952366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5314 | |EntrezGene=5314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9016 | |HGNC=9016 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_ENST00000340994_5end | |association_with_transcript=41bp_to_ENST00000340994_5end | ||
|cluster_id=chr6:51952347..51952366,- | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_2_at_PKHD1_5end | |description=CAGE_peak_2_at_PKHD1_5end | ||
|id=chr6:51952347..51952366,- | |id=chr6:51952347..51952366,- | ||
|ontology_enrichment_celltype=CL:0000239!6.63e-15!3;CL:1000615!6.63e-15!3;CL:0002306!6.63e-15!3;CL:1000507!1.69e-13!12;CL:1000494!1.69e-13!12;CL:1000497!7.51e-12!18;CL:0002518!7.51e-12!18;CL:1000449!5.63e-10!16;CL:0002681!7.47e-09!13;CL:0002584!7.47e-09!13 | |ontology_enrichment_celltype=CL:0000239!6.63e-15!3;CL:1000615!6.63e-15!3;CL:0002306!6.63e-15!3;CL:1000507!1.69e-13!12;CL:1000494!1.69e-13!12;CL:1000497!7.51e-12!18;CL:0002518!7.51e-12!18;CL:1000449!5.63e-10!16;CL:0002681!7.47e-09!13;CL:0002584!7.47e-09!13 | ||
|ontology_enrichment_celltype_v019=CL:0000313;2.18e-13;1!CL:0002563;1.75e-12;4!CL:0000159;2.50e-07;2!CL:0002253;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.32e-13,1;CL:0002563,1.75e-12,4;CL:0000159,2.58e-07,2;CL:0002253,4.98e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.24e-13;1!UBERON:0007297;2.50e-07;2 | |||
|ontology_enrichment_disease=DOID:4468!1.23e-10!2 | |ontology_enrichment_disease=DOID:4468!1.23e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:2152;2.18e-13;1!DOID:4468;3.09e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.32e-13,1;DOID:4468,3.28e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006947;1.17e-16;3!UBERON:0004054;1.17e-16;3!UBERON:0001301;2.18e-13;1!UBERON:0004911;2.18e-13;1!UBERON:0001000;7.24e-13;1!UBERON:0005352;7.24e-13;1!UBERON:0005904;9.75e-13;4!UBERON:0001242;1.75e-12;4!UBERON:0001262;1.75e-12;4!UBERON:0004786;1.75e-12;4!UBERON:0004808;1.75e-12;4!UBERON:0001277;1.75e-12;4!UBERON:0000485;1.63e-07;7!UBERON:0003929;1.63e-07;7!UBERON:0004909;2.50e-07;2 | |||
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|short_description=p2@PKHD1 | |short_description=p2@PKHD1 | ||
}} | }} |
Latest revision as of 05:43, 19 September 2015
Short description: | p2@PKHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKHD1_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 41bp_to_ENST00000340994_5end |
EntrezGene: | PKHD1 |
HGNC: | 9016 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.32e-13 | 1 |
intestinal epithelial cell | 1.75e-12 | 4 |
seromucus secreting cell | 2.58e-07 | 2 |
epithelial cell of large intestine | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.55e-17 | 3 |
internal male genitalia | 8.55e-17 | 3 |
epididymis | 2.06e-13 | 1 |
epithelium of female gonad | 2.32e-13 | 1 |
vas deferens | 4.77e-13 | 1 |
spermatic cord | 4.77e-13 | 1 |
duct of male reproductive system | 7.70e-13 | 4 |
intestinal mucosa | 1.75e-12 | 4 |
wall of intestine | 1.75e-12 | 4 |
gastrointestinal system mucosa | 1.75e-12 | 4 |
gastrointestinal system epithelium | 1.75e-12 | 4 |
intestinal epithelium | 1.75e-12 | 4 |
kidney | 1.46e-07 | 26 |
kidney mesenchyme | 1.46e-07 | 26 |
upper urinary tract | 1.46e-07 | 26 |
kidney rudiment | 1.46e-07 | 26 |
kidney field | 1.46e-07 | 26 |
epithelium of gonad | 2.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.32e-13 | 1 |
clear cell adenocarcinoma | 3.28e-07 | 2 |