FFCP PHASE1:Hg19::chr12:54689552..54689574,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4778 | |EntrezGene=4778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7780 | |HGNC=7780 | ||
|TSSclassifier=strong | |||
|UniProt=Q16621,A8K3E0 | |UniProt=Q16621,A8K3E0 | ||
|association_with_transcript=-8bp_to_ENST00000312156,NM_006163,uc001sfq.2_5end | |||
|cluster_id=chr12:54689552..54689574,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_6_at_NFE2_5end | |||
|id=chr12:54689552..54689574,- | |||
|ontology_enrichment_celltype=CL:0000764!1.56e-08!2;CL:0000765!1.56e-08!2;CL:0000050!1.56e-08!2;CL:0000038!1.56e-08!2;CL:0000558!1.56e-08!2;CL:0000547!1.56e-08!2;CL:0000549!1.56e-08!2;CL:0000550!1.56e-08!2;CL:0000552!1.56e-08!2;CL:0000763!7.12e-08!112;CL:0000049!7.12e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000764;9.98e-16;2!CL:0000558;9.98e-16;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.98e-16,2;CL:0000765,9.98e-16,2;CL:0000050,9.98e-16,2;CL:0000038,9.98e-16,2;CL:0000558,9.98e-16,2;CL:0000547,9.98e-16,2;CL:0000549,9.98e-16,2;CL:0000550,9.98e-16,2;CL:0000552,9.98e-16,2;CL:0000763,2.87e-08,108;CL:0000049,2.87e-08,108 | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.68e-08;1 | |||
|ontology_enrichment_disease=DOID:1036!2.50e-20!8;DOID:8692!8.84e-16!31;DOID:1240!6.49e-12!39;DOID:2531!2.03e-08!51;DOID:0060083!2.03e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.98e-30;8!DOID:8692;2.94e-24;31!DOID:1240;3.88e-15;39!DOID:2531;8.36e-10;51!DOID:0060083;8.36e-10;51!DOID:8552;4.11e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.09e-30,8;DOID:8692,9.97e-25,31;DOID:1240,2.90e-19,39;DOID:2531,2.80e-14,51;DOID:0060083,2.80e-14,51;DOID:8552,4.11e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.52e-26!15;UBERON:0000179!1.52e-26!15;UBERON:0000463!1.52e-26!15;UBERON:0007023!1.17e-11!115;UBERON:0000341!1.50e-07!2;UBERON:0002390!4.14e-07!102;UBERON:0003061!4.14e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.03e-37;15!UBERON:0000179;4.03e-37;15!UBERON:0000463;4.03e-37;15!UBERON:0002390;4.58e-19;32!UBERON:0002193;1.34e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.03e-37,15;UBERON:0000179,4.03e-37,15;UBERON:0000463,4.03e-37,15;UBERON:0007023,9.10e-07,114 | |||
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| ||
|short_description=p6@NFE2 | |||
}} | }} |
Latest revision as of 05:42, 19 September 2015
Short description: | p6@NFE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NFE2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -8bp_to_ENST00000312156, NM_006163, uc001sfq.2_5end |
EntrezGene: | NFE2 |
HGNC: | 7780 |
UniProt: | Q16621A8K3E0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.98e-16 | 2 |
erythroblast | 9.98e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 9.98e-16 | 2 |
erythroid progenitor cell | 9.98e-16 | 2 |
reticulocyte | 9.98e-16 | 2 |
proerythroblast | 9.98e-16 | 2 |
basophilic erythroblast | 9.98e-16 | 2 |
polychromatophilic erythroblast | 9.98e-16 | 2 |
orthochromatic erythroblast | 9.98e-16 | 2 |
myeloid cell | 2.87e-08 | 108 |
common myeloid progenitor | 2.87e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 4.03e-37 | 15 |
haemolymphatic fluid | 4.03e-37 | 15 |
organism substance | 4.03e-37 | 15 |
adult organism | 9.10e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.09e-30 | 8 |
myeloid leukemia | 9.97e-25 | 31 |
leukemia | 2.90e-19 | 39 |
hematologic cancer | 2.80e-14 | 51 |
immune system cancer | 2.80e-14 | 51 |
chronic myeloid leukemia | 4.11e-08 | 1 |