FFCP PHASE1:Hg19::chr1:75600067..75600094,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=431707 | |EntrezGene=431707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28838 | |HGNC=28838 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGE3 | |UniProt=E9PGE3 | ||
|association_with_transcript=-472bp_to_ENST00000356261,uc001dgq.2_5end | |association_with_transcript=-472bp_to_ENST00000356261,uc001dgq.2_5end | ||
|cluster_id=chr1:75600067..75600094,+ | |||
|coexpression_cluster_id=C3996 | |coexpression_cluster_id=C3996 | ||
|description=CAGE_peak_2_at_LHX8_5end | |description=CAGE_peak_2_at_LHX8_5end | ||
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|ontology_enrichment_celltype=CL:0002556!4.77e-25!6;CL:0002552!2.78e-21!5;CL:0000057!4.84e-15!75;CL:0002580!6.14e-13!3;CL:0002617!7.42e-09!2;CL:0000055!9.50e-08!180 | |ontology_enrichment_celltype=CL:0002556!4.77e-25!6;CL:0002552!2.78e-21!5;CL:0000057!4.84e-15!75;CL:0002580!6.14e-13!3;CL:0002617!7.42e-09!2;CL:0000055!9.50e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002556;1.18e-46;6!CL:0002552;1.75e-39;5!CL:0002580;2.00e-23;3!CL:0000057;1.77e-09;73 | |ontology_enrichment_celltype_v019=CL:0002556;1.18e-46;6!CL:0002552;1.75e-39;5!CL:0002580;2.00e-23;3!CL:0000057;1.77e-09;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0002556,9.31e-47,6;CL:0002552,1.75e-39,5;CL:0002580,2.17e-23,3;CL:0000057,2.34e-20,76 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.74e-09;1!UBERON:0003852;1.74e-09;1 | |ontology_enrichment_development_v019=UBERON:0003099;1.74e-09;1!UBERON:0003852;1.74e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001758;1.18e-46;6!UBERON:0003672;1.18e-46;6!UBERON:0000165;1.03e-44;28!UBERON:0003129;6.01e-40;7!UBERON:0011137;2.24e-34;11!UBERON:0010323;2.24e-34;11!UBERON:0001828;1.15e-24;8!UBERON:0000075;2.06e-23;16!UBERON:0007811;9.83e-21;52!UBERON:0001444;4.07e-19;48!UBERON:0000033;3.46e-18;50!UBERON:0000153;8.96e-16;54!UBERON:0003729;3.90e-15;13!UBERON:0001555;7.74e-14;54!UBERON:0000310;2.39e-12;10!UBERON:0001443;3.04e-11;11!UBERON:0001723;6.32e-11;3!UBERON:0001033;6.32e-11;3!UBERON:0000161;2.67e-10;19!UBERON:0000166;2.67e-10;19!UBERON:0000344;8.96e-10;20!UBERON:0005705;1.74e-09;1!UBERON:0008193;1.74e-09;1!UBERON:0010912;1.74e-09;1!UBERON:0002514;1.74e-09;1!UBERON:0003457;1.74e-09;1!UBERON:0008907;1.74e-09;1!UBERON:0008001;1.74e-09;1!UBERON:0007213;1.74e-09;1!UBERON:0009891;1.74e-09;1!UBERON:0007914;1.74e-09;1!UBERON:0007375;1.74e-09;1!UBERON:0003323;1.74e-09;1!UBERON:0010258;1.74e-09;1!UBERON:0005253;1.74e-09;1!UBERON:0007842;1.74e-09;1!UBERON:0002397;1.74e-09;1!UBERON:0003113;1.74e-09;1!UBERON:0003277;1.74e-09;1!UBERON:0001709;1.74e-09;1!UBERON:0002244;1.74e-09;1!UBERON:0005620;1.74e-09;1!UBERON:0010364;1.74e-09;1!UBERON:0004288;1.74e-09;1!UBERON:0001434;2.04e-09;36!UBERON:0001282;3.87e-09;1!UBERON:0009842;3.87e-09;1!UBERON:0003704;3.87e-09;1!UBERON:0001171;3.87e-09;1!UBERON:0001172;3.87e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0001758;1.18e-46;6!UBERON:0003672;1.18e-46;6!UBERON:0000165;1.03e-44;28!UBERON:0003129;6.01e-40;7!UBERON:0011137;2.24e-34;11!UBERON:0010323;2.24e-34;11!UBERON:0001828;1.15e-24;8!UBERON:0000075;2.06e-23;16!UBERON:0007811;9.83e-21;52!UBERON:0001444;4.07e-19;48!UBERON:0000033;3.46e-18;50!UBERON:0000153;8.96e-16;54!UBERON:0003729;3.90e-15;13!UBERON:0001555;7.74e-14;54!UBERON:0000310;2.39e-12;10!UBERON:0001443;3.04e-11;11!UBERON:0001723;6.32e-11;3!UBERON:0001033;6.32e-11;3!UBERON:0000161;2.67e-10;19!UBERON:0000166;2.67e-10;19!UBERON:0000344;8.96e-10;20!UBERON:0005705;1.74e-09;1!UBERON:0008193;1.74e-09;1!UBERON:0010912;1.74e-09;1!UBERON:0002514;1.74e-09;1!UBERON:0003457;1.74e-09;1!UBERON:0008907;1.74e-09;1!UBERON:0008001;1.74e-09;1!UBERON:0007213;1.74e-09;1!UBERON:0009891;1.74e-09;1!UBERON:0007914;1.74e-09;1!UBERON:0007375;1.74e-09;1!UBERON:0003323;1.74e-09;1!UBERON:0010258;1.74e-09;1!UBERON:0005253;1.74e-09;1!UBERON:0007842;1.74e-09;1!UBERON:0002397;1.74e-09;1!UBERON:0003113;1.74e-09;1!UBERON:0003277;1.74e-09;1!UBERON:0001709;1.74e-09;1!UBERON:0002244;1.74e-09;1!UBERON:0005620;1.74e-09;1!UBERON:0010364;1.74e-09;1!UBERON:0004288;1.74e-09;1!UBERON:0001434;2.04e-09;36!UBERON:0001282;3.87e-09;1!UBERON:0009842;3.87e-09;1!UBERON:0003704;3.87e-09;1!UBERON:0001171;3.87e-09;1!UBERON:0001172;3.87e-09;1 | ||
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|short_description=p2@LHX8 | |short_description=p2@LHX8 | ||
}} | }} |
Latest revision as of 05:36, 19 September 2015
Short description: | p2@LHX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LHX8_5end |
Coexpression cluster: | C3996_Fibroblast_normal_Preadipocyte_tenocyte_cholangiocellular_medulloblastoma_liposarcoma |
Association with transcript: | -472bp_to_ENST00000356261, uc001dgq.2_5end |
EntrezGene: | LHX8 |
HGNC: | 28838 |
UniProt: | E9PGE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 9.31e-47 | 6 |
fibroblast of gingiva | 1.75e-39 | 5 |
preadipocyte of the breast | 2.17e-23 | 3 |
fibroblast | 2.34e-20 | 76 |