FFCP PHASE1:Hg19::chr11:6463820..6463833,-: Difference between revisions
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|id=chr11:6463820..6463833,-
|short_description=p4@HPX
|description=CAGE_peak_4_at_HPX_5end
|association_with_transcript=13bp_to_ENST00000525057_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3263 | |EntrezGene=3263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5171 | |HGNC=5171 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000525057_5end | |||
|cluster_id=chr11:6463820..6463833,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_HPX_5end | |||
|id=chr11:6463820..6463833,- | |||
|ontology_enrichment_celltype=CL:0000181!2.32e-25!12;CL:0000417!2.32e-25!12;CL:0000668!2.32e-25!12;CL:0000414!2.32e-25!12;CL:0000412!2.32e-25!12;CL:0000182!2.32e-25!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.32e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.32e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.07e-28!19;UBERON:0006925!3.07e-28!19;UBERON:0008836!3.07e-28!19;UBERON:0008835!1.71e-24!22;UBERON:0003894!1.71e-24!22;UBERON:0009854!1.84e-23!23;UBERON:0007499!1.21e-21!25;UBERON:0009497!1.21e-21!25;UBERON:0000015!1.21e-21!25;UBERON:0002423!1.21e-21!25;UBERON:0006235!1.21e-21!25;UBERON:0004161!1.21e-21!25;UBERON:0005057!7.73e-21!26;UBERON:0009856!7.73e-21!26;UBERON:0002365!1.37e-17!31;UBERON:0002330!1.37e-17!31;UBERON:0002368!1.18e-15!35;UBERON:0000949!2.58e-12!45;UBERON:0003929!2.34e-10!54;UBERON:0005172!3.53e-10!55;UBERON:0005173!3.53e-10!55;UBERON:0002530!1.59e-09!59;UBERON:0002417!3.14e-09!61;UBERON:0000916!3.14e-09!61;UBERON:0005911!5.45e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.07e-28;19!UBERON:0006925;3.07e-28;19!UBERON:0002423;1.21e-21;25!UBERON:0002365;3.74e-18;31!UBERON:0002330;3.74e-18;31!UBERON:0002368;1.27e-14;33!UBERON:0000949;2.81e-12;43!UBERON:0005172;4.58e-09;52!UBERON:0005173;4.58e-09;52!UBERON:0002530;7.53e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.07e-28,19;UBERON:0006925,3.07e-28,19;UBERON:0008836,3.07e-28,19;UBERON:0008835,1.71e-24,22;UBERON:0003894,1.71e-24,22;UBERON:0009854,1.84e-23,23;UBERON:0007499,1.21e-21,25;UBERON:0009497,1.21e-21,25;UBERON:0000015,1.21e-21,25;UBERON:0002423,1.21e-21,25;UBERON:0006235,1.21e-21,25;UBERON:0004161,1.21e-21,25;UBERON:0009856,7.73e-21,26;UBERON:0002365,1.37e-17,31;UBERON:0002330,1.37e-17,31;UBERON:0002368,1.18e-15,35;UBERON:0000949,2.58e-12,45;UBERON:0003929,2.34e-10,54;UBERON:0005172,2.34e-10,54;UBERON:0005173,2.34e-10,54;UBERON:0002530,1.59e-09,59;UBERON:0002417,2.25e-09,60;UBERON:0000916,2.25e-09,60;UBERON:0005911,5.45e-07,82 | |||
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|short_description=p4@HPX | |||
}} | }} |
Latest revision as of 05:17, 19 September 2015
Short description: | p4@HPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HPX_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 13bp_to_ENST00000525057_5end |
EntrezGene: | HPX |
HGNC: | 5171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.32e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.07e-28 | 19 |
digestive gland | 3.07e-28 | 19 |
liver bud | 3.07e-28 | 19 |
hepatic diverticulum | 1.71e-24 | 22 |
liver primordium | 1.71e-24 | 22 |
digestive tract diverticulum | 1.84e-23 | 23 |
epithelial sac | 1.21e-21 | 25 |
epithelium of foregut-midgut junction | 1.21e-21 | 25 |
anatomical boundary | 1.21e-21 | 25 |
hepatobiliary system | 1.21e-21 | 25 |
foregut-midgut junction | 1.21e-21 | 25 |
septum transversum | 1.21e-21 | 25 |
sac | 7.73e-21 | 26 |
exocrine gland | 1.37e-17 | 31 |
exocrine system | 1.37e-17 | 31 |
endocrine gland | 1.18e-15 | 35 |
endocrine system | 2.58e-12 | 45 |
gut epithelium | 2.34e-10 | 54 |
abdomen element | 2.34e-10 | 54 |
abdominal segment element | 2.34e-10 | 54 |
gland | 1.59e-09 | 59 |
abdominal segment of trunk | 2.25e-09 | 60 |
abdomen | 2.25e-09 | 60 |
endo-epithelium | 5.45e-07 | 82 |