FFCP PHASE1:Hg19::chr12:54380036..54380091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3226 | |EntrezGene=3226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5122 | |HGNC=5122 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000514415_5end | |association_with_transcript=-30bp_to_ENST00000514415_5end | ||
|cluster_id=chr12:54380036..54380091,+ | |||
|description=CAGE_peak_4_at_HOXC10_5end | |description=CAGE_peak_4_at_HOXC10_5end | ||
|id=chr12:54380036..54380091,+ | |id=chr12:54380036..54380091,+ | ||
|ontology_enrichment_celltype=CL:0002570!9.12e-08!8;CL:0000136!5.13e-07!15;CL:0000153!6.58e-07!9;CL:0000447!6.58e-07!9 | |ontology_enrichment_celltype=CL:0002570!9.12e-08!8;CL:0000136!5.13e-07!15;CL:0000153!6.58e-07!9;CL:0000447!6.58e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.21e-10;8!CL:0000153;4.01e-09;9!CL:0000447;4.01e-09;9!CL:0002540;5.37e-09;6!CL:0000680;7.08e-09;7!CL:0000138;6.59e-07;6 | |ontology_enrichment_celltype_v019=CL:0002570;1.21e-10;8!CL:0000153;4.01e-09;9!CL:0000447;4.01e-09;9!CL:0002540;5.37e-09;6!CL:0000680;7.08e-09;7!CL:0000138;6.59e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002570,1.24e-10,8;CL:0000153,2.21e-09,9;CL:0000447,2.21e-09,9;CL:0002540,5.84e-09,6;CL:0000058,5.43e-07,6;CL:0000138,5.43e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.23e-13!143;DOID:162!5.04e-10!235;DOID:14566!5.57e-10!239;DOID:305!3.32e-07!106 | |ontology_enrichment_disease=DOID:0050687!1.23e-13!143;DOID:162!5.04e-10!235;DOID:14566!5.57e-10!239;DOID:305!3.32e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.81e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.36e-10!9;UBERON:0001013!1.55e-09!14 | |ontology_enrichment_uberon=UBERON:0001737!3.36e-10!9;UBERON:0001013!1.55e-09!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.38e-14;9!UBERON:0001557;3.38e-14;9!UBERON:0001013;2.16e-13;14!UBERON:0001134;9.12e-08;16!UBERON:0002036;9.12e-08;16!UBERON:0002072;3.60e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001737;3.38e-14;9!UBERON:0001557;3.38e-14;9!UBERON:0001013;2.16e-13;14!UBERON:0001134;9.12e-08;16!UBERON:0002036;9.12e-08;16!UBERON:0002072;3.60e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.50e-14,9;UBERON:0001013,1.70e-13,14;UBERON:0002072,3.90e-07,5 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,1.0007329835313,0,1.74467704820074,2.53299878168311,8.2123583545488,1.30592814099919,0,0,0,0,1.11389717664042,2.31978163009541,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,2.1686349143074,3.50936537445123,2.75208386025565,3.1811437882044,1.94653948121054,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,9.41526687476347,1.17434498643765,0.647491777472526,1.26405726032024,0,0,0,0,0,17.2930658768225,4.31170885089743,0,0,0,0,0,0,0,0,0,0,0,0,2.83404594050192,6.51408997160564,4.05063197379039,6.23596833031671,0,0,0,0,0,5.25637836162512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8306800039844,13.31819051617,17.1117831217272,13.5661586460845,13.5085255337292,19.693461386221,9.16852895489118,9.22240886089127,10.7729203944989,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,3.9206299240536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,1.74380363108377,0,0,0,0.207328115540772,0,0.12624243342638,2.22242630022592,4.96584953225761,7.03304683260282,1.71072446022705,0.411309970813294,4.80548892550268,2.28661146104463,0,0,0,5.30014034606889,7.15312891703765,9.298330278116,0.26593811658487,0,10.2882949704857,1.41849132023278,11.7225758767084,0,5.42621605391443,2.46972101034231,5.5375151329935,0,3.16780749173372,0,0,0,0,0,0,0,0,7.13184525203592,4.63300181336253,4.31500277355805,3.04403637507822,0.336255431980582,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,0,0,0,0,0.300946099727719,2.27407504055985,0,2.65690239414175,0.368738337083406,1.91143951829782,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0.561320188866147,0,3.58195074346692,0,0,12.6451948918178,11.7190738706664,3.94210348866284,0,6.62399157221768,0,0,0,0,0,0,1.80479845162965,0.770153371044148,0.784349769176855,0,0.949964660035881,0,0,0.431831832204279,0,3.79325012561394,3.01013864312912,1.78413391131527,1.66215201785745,3.1342465661105,0,0,0,0,0,0.103041011647722,0.366277859273374,0.495056999523528,2.29706215198469,1.30012049207304,0,1.25671933779759,0.308097234229289,0.614014698904518,2.61889487720608,3.6522883255213,2.17525040871343,2.21589231281862,4.62966585363034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,1.70599442741899,1.05650146756755,0,0,0,0,0,0,0,0,7.30477357065735,2.78841148289775,6.76069446077379,3.44187245289724,3.43871643545924,7.133421029625,0,2.9555068941673,1.64647446479951,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.854592569019785,0.962479855263359,2.94048259177238,0,0,0,1.11598390910176,0,0,0,0,0,5.934101654863,0.47003968731907,0,0,0.1605880751037,0,0,0,0,0,0,3.12620952643264,0,0,0,0,0,4.11709188898084,1.90460633053462,1.8204078262427,0,1.98895302764489,0,0,0,0,0,0,0,22.8015440778233,1.79323189425963,0,1.25966373927138,0,0,0,0,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0,9.53313999958533,0.724999575434793,0,0,3.07303986298317,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,4.13966161372163,5.29810228258692,0,0,0,0.269272933229316,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,3.58335422944858,3.86361213170185,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,1.66409607615766,0,0,0,1.22308667769421,0.343972064943233,2.90268993867255,2.19267951258557,3.12038736802195,0,2.47117154736201,0,0.137041924646751,0.794858446811959,0,2.15106521008283,0.0801588202515337,0,0.799238438328521,8.21315377778404,0.572682980829578,0,0,0,0.471388069233591,1.22313785466253,1.35983700206033,1.52997326454483,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,6.98975697164723,0,0,0,0.984274815147488,0,0,0,0,0,0,0,0.77380195455795,0,3.68978156359193,6.30445658393585,4.87827669655482,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0.681552087141687,0.79318464064088,0,0,0,0,0,1.40963004463334,0,0,0,0,5.92834895693833,0.852548188666271,6.38341257770182,1.63205341010842,1.5041393641362,1.53172788381731,0.655745261419609,0,0,0,0,0,0,0,0.276697269872462,0,2.42638588066636,0.285465333544967,1.88212655758537,0,0.724605143054126,4.92540849526684,6.77768598556951,11.0961172300523,8.90194124792919,12.0752592841236,8.00830099436882,0,0,0,0,0,0.449803112163605,0.621051827505038,0,0,0,0,0.380805212168795,0,0,0.644463342254931,0.464033759878494,0.796191777397232,0,2.06037423109676,1.6837474438296,0,2.50405779529494,0,0,0,2.08370226891451,0.734210113519403,0,0,0.657852148736121,0.883445729729405,0,0,0,0,0.607719912354764,0,0,0,0,0.982829546539238,0.245772908753719,2.3244333569449,0,0,0,0,1.47284760201473,0,0,0,0,0.314531883711793,0.436838552768056,1.01839517972415,5.10179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| ||
|short_description=p4@HOXC10 | |short_description=p4@HOXC10 | ||
}} | }} |
Latest revision as of 04:38, 19 September 2015
Short description: | p4@HOXC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXC10_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000514415_5end |
EntrezGene: | HOXC10 |
HGNC: | 5122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.24e-10 | 8 |
GAG secreting cell | 2.21e-09 | 9 |
carbohydrate secreting cell | 2.21e-09 | 9 |
mesenchymal stem cell of the bone marrow | 5.84e-09 | 6 |
chondroblast | 5.43e-07 | 6 |
chondrocyte | 5.43e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.50e-14 | 9 |
adipose tissue | 1.70e-13 | 14 |
hypodermis | 3.90e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.81e-09 | 143 |