FFCP PHASE1:Hg19::chr12:54379745..54379749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3222 | |EntrezGene=3222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5127 | |HGNC=5127 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=116bp_to_ENST00000513209_5end | |association_with_transcript=116bp_to_ENST00000513209_5end | ||
|cluster_id=chr12:54379745..54379749,+ | |||
|description=CAGE_peak_6_at_HOXC5_5end | |description=CAGE_peak_6_at_HOXC5_5end | ||
|id=chr12:54379745..54379749,+ | |id=chr12:54379745..54379749,+ | ||
|ontology_enrichment_celltype=CL:0000153!1.54e-08!9;CL:0000447!1.54e-08!9 | |ontology_enrichment_celltype=CL:0000153!1.54e-08!9;CL:0000447!1.54e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002540;1.53e-11;6!CL:0000650;1.75e-09;2!CL:1000500;1.75e-09;2!CL:1000618;1.75e-09;2!CL:1001318;1.75e-09;2!CL:0002173;1.75e-09;2!CL:0000135;3.15e-07;3!CL:0000388;3.15e-07;3!CL:0002092;5.95e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,7.24e-12,6;CL:0000650,5.34e-09,2;CL:1000500,5.34e-09,2;CL:1000618,5.34e-09,2;CL:1001318,5.34e-09,2;CL:0002173,5.34e-09,2;CL:0000135,3.22e-07,3;CL:0000388,3.22e-07,3;CL:0002092,3.85e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.00e-14!143;DOID:305!1.50e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!3.84e-10!9;UBERON:0004905!4.17e-07!5;UBERON:0000982!4.17e-07!5;UBERON:0004770!4.17e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.85e-23;9!UBERON:0001557;6.85e-23;9!UBERON:0003567;1.75e-09;2!UBERON:0003838;1.75e-09;2!UBERON:0003586;1.75e-09;2!UBERON:0005169;1.75e-09;2!UBERON:0002321;1.75e-09;2!UBERON:0005215;1.75e-09;2!UBERON:0002303;1.75e-09;2!UBERON:0002319;1.75e-09;2!UBERON:0007846;3.15e-07;3!UBERON:0000043;3.15e-07;3!UBERON:0007845;3.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.32e-23,9;UBERON:0001557,1.99e-10,19;UBERON:0003567,5.34e-09,2;UBERON:0003838,5.34e-09,2;UBERON:0003586,5.34e-09,2;UBERON:0005169,5.34e-09,2;UBERON:0002321,5.34e-09,2;UBERON:0005215,5.34e-09,2;UBERON:0002303,5.34e-09,2;UBERON:0002319,5.34e-09,2;UBERON:0007846,3.22e-07,3;UBERON:0000043,3.22e-07,3;UBERON:0007845,3.22e-07,3 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0.631719873426831,1.56711376919903,0,0,0,0,1.48519623552056,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,1.30361867064741,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04614076386261,0.469737994575059,0,0.842704840213491,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.930584281657949,1.0126579934476,1.75386609290158,0,0,0,0,0,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01121560067735,1.51726221070292,1.20505514941741,1.8749975364507,2.39667388501647,1.42362371466658,0.539325232640658,1.37355025587742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.804231779293047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,1.71495859578347,0,0,0,0.387815147273333,0,0,0,0,1.80045161983499,0,1.5985330740966,0,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,2.67119219315498,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,0,0.813795071099207,0,0,0,0,0,2.27407504055985,2.0694614258501,1.32845119707087,0,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0.925258162815933,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.308061348417659,1.56869953835371,0,0.211103257785751,0,0,0.215915916102139,0,1.08378575017541,1.00337954770971,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,1.30012049207304,0,0.676695028044854,0.154048617114644,0,0.137836572484531,0.751941714077915,0.435050081742686,0.255679882248303,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,1.00387946542836,0.589494246078727,0.7133421029625,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0.245040215981032,0,0,0,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.293016358543788,0.242721043499027,0,0,0,0,0,0,0,0,0,0.844501632511974,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,1.48681999993533,0,0,0,0.236387681767936,0.344743373241465,0,0.520874984799877,0,0,0,0,0,0,0.544692317594951,0,0,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.195984794828755,0,0.17472666824203,0.171986032471617,1.16107597546902,2.11959019549938,1.72442459811739,0,0.264768380074501,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0.864542502924636,0.229073192331831,0,0,0,0,0.135904206073614,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0.335434687599266,0.472834243795189,0.577000469484979,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.303298235083296,0.856396000634902,0,0,0.434763085832475,0,0,0,0,1.0062716070103,1.77962244319307,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.686791410365586,0.673498977531838,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.637724760305049,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0,0.115525666150338,0,0,0,0.150420656698515,0.40341013740704,0,0,0.327543835020193,0.591424344868181,0,0,0,0,0,0,0.992422356778588,1.75871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,1.29556554731173,0,0,0,0.348724276104376,0.695433089210318,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0.98150233615243,0,1.29485767437579,0.615976841137482,0,2.4285549652957,0,0,0.237840181555137,0,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,3.31320280605688,0,0,0,3.71995018166751,0.924351257262837,2.16313281061895,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0.631719873426831,1.56711376919903,0,0,0,0,1.48519623552056,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,1.30361867064741,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04614076386261,0.469737994575059,0,0.842704840213491,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.930584281657949,1.0126579934476,1.75386609290158,0,0,0,0,0,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01121560067735,1.51726221070292,1.20505514941741,1.8749975364507,2.39667388501647,1.42362371466658,0.539325232640658,1.37355025587742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.804231779293047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,1.71495859578347,0,0,0,0.387815147273333,0,0,0,0,1.80045161983499,0,1.5985330740966,0,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,2.67119219315498,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,0,0.813795071099207,0,0,0,0,0,2.27407504055985,2.0694614258501,1.32845119707087,0,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0.925258162815933,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.308061348417659,1.56869953835371,0,0.211103257785751,0,0,0.215915916102139,0,1.08378575017541,1.00337954770971,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,1.30012049207304,0,0.676695028044854,0.154048617114644,0,0.137836572484531,0.751941714077915,0.435050081742686,0.255679882248303,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,1.00387946542836,0.589494246078727,0.7133421029625,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0.245040215981032,0,0,0,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.293016358543788,0.242721043499027,0,0,0,0,0,0,0,0,0,0.844501632511974,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,1.48681999993533,0,0,0,0.236387681767936,0.344743373241465,0,0.520874984799877,0,0,0,0,0,0,0.544692317594951,0,0,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.195984794828755,0,0.17472666824203,0.171986032471617,1.16107597546902,2.11959019549938,1.72442459811739,0,0.264768380074501,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0.864542502924636,0.229073192331831,0,0,0,0,0.135904206073614,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0.335434687599266,0.472834243795189,0.577000469484979,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.303298235083296,0.856396000634902,0,0,0.434763085832475,0,0,0,0,1.0062716070103,1.77962244319307,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.686791410365586,0.673498977531838,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.637724760305049,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0,0.115525666150338,0,0,0,0.150420656698515,0.40341013740704,0,0,0.327543835020193,0.591424344868181,0,0,0,0,0,0,0.992422356778588,1.75871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,1.29556554731173,0,0,0,0.348724276104376,0.695433089210318,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0.98150233615243,0,1.29485767437579,0.615976841137482,0,2.4285549652957,0,0,0.237840181555137,0,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,3.31320280605688,0,0,0,3.71995018166751,0.924351257262837,2.16313281061895,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p6@HOXC5 | |short_description=p6@HOXC5 | ||
}} | }} |
Latest revision as of 04:35, 19 September 2015
Short description: | p6@HOXC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HOXC5_5end |
Coexpression cluster: | NA |
Association with transcript: | 116bp_to_ENST00000513209_5end |
EntrezGene: | HOXC5 |
HGNC: | 5127 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 7.24e-12 | 6 |
mesangial cell | 5.34e-09 | 2 |
kidney interstitial cell | 5.34e-09 | 2 |
juxtaglomerular complex cell | 5.34e-09 | 2 |
renal interstitial pericyte | 5.34e-09 | 2 |
extraglomerular mesangial cell | 5.34e-09 | 2 |
fibrocyte | 3.22e-07 | 3 |
tendon cell | 3.22e-07 | 3 |
bone marrow cell | 3.85e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.32e-23 | 9 |
upper respiratory tract | 1.99e-10 | 19 |
abdomen connective tissue | 5.34e-09 | 2 |
abdominal segment connective tissue | 5.34e-09 | 2 |
trunk connective tissue | 5.34e-09 | 2 |
interstitial tissue | 5.34e-09 | 2 |
extraglomerular mesangium | 5.34e-09 | 2 |
kidney interstitium | 5.34e-09 | 2 |
juxtaglomerular apparatus | 5.34e-09 | 2 |
mesangium | 5.34e-09 | 2 |
dense regular connective tissue | 3.22e-07 | 3 |
tendon | 3.22e-07 | 3 |
regular connective tissue | 3.22e-07 | 3 |