FFCP PHASE1:Hg19::chr3:57557630..57557641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=378 | |EntrezGene=378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=655 | |HGNC=655 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-349bp_to_U91921_5end | |association_with_transcript=-349bp_to_U91921_5end | ||
|cluster_id=chr3:57557630..57557641,- | |||
|description=CAGE_peak_10_at_ARF4_5end | |description=CAGE_peak_10_at_ARF4_5end | ||
|id=chr3:57557630..57557641,- | |id=chr3:57557630..57557641,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002521;1.39e-09;3!CL:0002592;2.63e-09;3!CL:0000359;3.86e-09;32!CL:0000136;4.01e-08;13!CL:0002616;5.03e-08;1!CL:0000319;1.34e-07;1!CL:0002594;3.48e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.99e-10,15;CL:0002521,1.46e-09,3;CL:0002592,2.87e-09,3;CL:0000359,8.98e-09,32;CL:0002616,4.89e-08,1;CL:0000319,1.69e-07,1;CL:0002594,3.71e-07,4;CL:0000393,6.27e-07,61;CL:0000211,6.27e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.34e-07;1!UBERON:0003852;1.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.18e-19;3!DOID:127;2.18e-19;3!DOID:0060072;1.09e-14;4!DOID:3030;1.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.56e-19,3;DOID:127,1.56e-19,3;DOID:0060072,8.52e-15,4;DOID:3030,1.69e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.39e-09;3!UBERON:0003498;2.63e-09;3!UBERON:0005985;2.63e-09;3!UBERON:0001621;2.63e-09;3!UBERON:0005705;1.34e-07;1!UBERON:0008193;1.34e-07;1!UBERON:0010912;1.34e-07;1!UBERON:0002514;1.34e-07;1!UBERON:0003457;1.34e-07;1!UBERON:0008907;1.34e-07;1!UBERON:0008001;1.34e-07;1!UBERON:0007213;1.34e-07;1!UBERON:0009891;1.34e-07;1!UBERON:0007914;1.34e-07;1!UBERON:0007375;1.34e-07;1!UBERON:0003323;1.34e-07;1!UBERON:0010258;1.34e-07;1!UBERON:0005253;1.34e-07;1!UBERON:0007842;1.34e-07;1!UBERON:0002397;1.34e-07;1!UBERON:0003113;1.34e-07;1!UBERON:0003277;1.34e-07;1!UBERON:0001709;1.34e-07;1!UBERON:0002244;1.34e-07;1!UBERON:0005620;1.34e-07;1!UBERON:0010364;1.34e-07;1!UBERON:0004288;1.34e-07;1!UBERON:0001013;1.51e-07;14!UBERON:0001310;3.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.46e-09,3;UBERON:0001621,2.87e-09,3;UBERON:0007524,1.86e-08,73;UBERON:0001637,2.40e-08,42;UBERON:0003509,2.40e-08,42;UBERON:0004572,2.40e-08,42;UBERON:0005705,5.58e-08,1;UBERON:0008193,5.58e-08,1;UBERON:0010912,5.58e-08,1;UBERON:0002514,5.58e-08,1;UBERON:0003457,5.58e-08,1;UBERON:0008907,5.58e-08,1;UBERON:0008001,5.58e-08,1;UBERON:0007213,5.58e-08,1;UBERON:0009891,5.58e-08,1;UBERON:0007914,5.58e-08,1;UBERON:0009292,5.58e-08,1;UBERON:0003099,5.58e-08,1;UBERON:0007375,5.58e-08,1;UBERON:0003323,5.58e-08,1;UBERON:0010258,5.58e-08,1;UBERON:0007842,5.58e-08,1;UBERON:0009494,5.58e-08,1;UBERON:0010042,5.58e-08,1;UBERON:0010045,5.58e-08,1;UBERON:0010259,5.58e-08,1;UBERON:0010359,5.58e-08,1;UBERON:0009526,5.58e-08,1;UBERON:0002397,5.58e-08,1;UBERON:0003113,5.58e-08,1;UBERON:0003277,5.58e-08,1;UBERON:0001709,5.58e-08,1;UBERON:0004066,5.58e-08,1;UBERON:0002244,5.58e-08,1;UBERON:0005620,5.58e-08,1;UBERON:0004362,5.58e-08,1;UBERON:0010364,5.58e-08,1;UBERON:0010046,5.58e-08,1;UBERON:0005868,5.58e-08,1;UBERON:0007238,5.58e-08,1;UBERON:0004288,5.58e-08,1;UBERON:0004068,5.58e-08,1;UBERON:0010334,5.58e-08,1;UBERON:0003852,5.58e-08,1;UBERON:0010253,5.58e-08,1;UBERON:0001013,1.86e-07,14;UBERON:0001310,3.71e-07,4;UBERON:0002329,3.88e-07,71;UBERON:0003059,3.88e-07,71;UBERON:0007282,3.88e-07,71;UBERON:0004290,3.88e-07,71;UBERON:0009618,3.88e-07,71;UBERON:0003077,5.15e-07,72;UBERON:0007285,5.15e-07,72;UBERON:0001134,8.81e-07,62;UBERON:0002036,8.81e-07,62;UBERON:0003082,8.81e-07,62 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.704772020479856,0,0.893922188854576,2.61701557230111,2.53299878168311,1.26343974685366,0.261185628199839,0,0,0.655324116390517,0,0,0,0,1.20538905604795,0,0.975865597581014,0,0.204000691244253,0,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0.47296445977717,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,1.53041946185451,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0.48217676009124,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,4.87613732627923,0,0,0,1.50401373190767,0.434539556882471,0.795285947051099,0.486634870302636,0,0,0.43917392846563,0,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,1.01304409331664,0.132409180813219,0.286836620748814,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0.453728732640084,0,0,0.211931901159562,0,0.309157587715317,0,0.37223371266318,0,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0.355009592516614,0.503760491138201,0,0.193260853163297,0.545492241181669,0.860413786167011,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0.337169380156203,0,0.110293972732394,0,0,0,0.588664395376038,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0.219500570817251,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0.763976851116555,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.531876233169741,0,0,0,0.532844358032199,0.285955987316295,1.08524321078289,0,0,0.355391948742546,0,1.50719688529793,0,0.099972991182057,0,0.502257091432126,0,0.479249710983165,0,0,0.289562613335158,0.410952645100767,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0.24538298343828,0,0,0.415941723061614,1.24900292158013,0.630809660135739,0.468565659970853,1.20378439891088,4.5481500811197,0,0,0.184369168541703,0.781952530212746,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0.896974044789907,0,0.64341568457443,0,0.462629081407967,0.710246901252508,0.328508624055237,0.519254429183621,0.348631135379878,0.362578348774867,0.601519410909855,0,0.574072240823034,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.413509717453592,0.107420244868274,0,0.0852266274161009,0.356128142586949,0.826424576804891,0,0.127612712494584,0.10115778085555,1.39453664789186,0.62962469366128,0,0.308033580176089,0,0,0.55597265731176,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,1.56989728039846,0.179872457583315,0.823611089208164,0.117812402345686,1.01091240786658,1.58510321173008,0,0,0.243713489631284,0,0.409499734223957,0.424216295861138,0,0,0,0.876901770507525,0,0,0.405820753925408,0,1.12678241012897,0,0,1.426684205925,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0.593929361665277,0,0,0,0.333926115068718,0.329607748453519,0.211125408127993,0.19924798825107,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.21787692703798,0,0,0.455768223388005,0.23056390438806,0.628303510868405,0.217294743844016,0.638002319463839,0.641183153813036,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0.424059214301822,0,0,0.176915129006678,0.611030144933625,0,0.247127877893006,0,0,0.802577647298789,0,0.182454789215666,0.391329237864179,0.485560759068186,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.34945333648406,0,0.19351266257817,0.146178634172371,0,0.581934098930517,0.0882561266915003,0.225980740780532,0.411125773940253,0,0,0.195551382734803,0.08015882025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| ||
|short_description=p10@ARF4 | |short_description=p10@ARF4 | ||
}} | }} |
Latest revision as of 04:21, 19 September 2015
Short description: | p10@ARF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -349bp_to_U91921_5end |
EntrezGene: | ARF4 |
HGNC: | 655 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.99e-10 | 15 |
subcutaneous fat cell | 1.46e-09 | 3 |
smooth muscle cell of the coronary artery | 2.87e-09 | 3 |
vascular associated smooth muscle cell | 8.98e-09 | 32 |
perirenal adipocyte cell | 4.89e-08 | 1 |
mucus secreting cell | 1.69e-07 | 1 |
smooth muscle cell of the umbilical artery | 3.71e-07 | 4 |
electrically responsive cell | 6.27e-07 | 61 |
electrically active cell | 6.27e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.56e-19 | 3 |
leiomyoma | 1.56e-19 | 3 |
benign neoplasm | 8.52e-15 | 4 |
mucinous adenocarcinoma | 1.69e-07 | 1 |