FFCP PHASE1:Hg19::chr6:4773257..4773270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9425 | |EntrezGene=9425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1811 | |HGNC=1811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000483019_5end | |association_with_transcript=-4bp_to_ENST00000483019_5end | ||
|cluster_id=chr6:4773257..4773270,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_CDYL_5end | |description=CAGE_peak_2_at_CDYL_5end | ||
|id=chr6:4773257..4773270,+ | |id=chr6:4773257..4773270,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.87e-62!5;CL:0000039!2.14e-28!7;CL:0000586!2.14e-28!7;CL:0000540!1.94e-19!6;CL:0000031!1.94e-19!6;CL:0000404!1.94e-19!6;CL:0000047!9.66e-15!8;CL:0000319!2.07e-13!1;CL:0000148!9.76e-12!10;CL:0000541!9.76e-12!10;CL:0000147!1.53e-08!14;CL:0000159!2.40e-07!2;CL:0000133!5.10e-07!59 | |ontology_enrichment_celltype=CL:0002322!5.87e-62!5;CL:0000039!2.14e-28!7;CL:0000586!2.14e-28!7;CL:0000540!1.94e-19!6;CL:0000031!1.94e-19!6;CL:0000404!1.94e-19!6;CL:0000047!9.66e-15!8;CL:0000319!2.07e-13!1;CL:0000148!9.76e-12!10;CL:0000541!9.76e-12!10;CL:0000147!1.53e-08!14;CL:0000159!2.40e-07!2;CL:0000133!5.10e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.72e-66;5!CL:0000039;3.29e-30;7!CL:0000586;3.29e-30;7!CL:0002321;4.73e-22;15!CL:0000540;1.20e-20;6!CL:0000404;1.20e-20;6!CL:0000148;1.97e-12;10!CL:0000147;4.81e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.13e-66,5;CL:0000039,3.55e-30,7;CL:0000586,3.55e-30,7;CL:0000540,1.25e-20,6;CL:0000031,1.25e-20,6;CL:0000404,1.25e-20,6;CL:0000047,1.21e-15,8;CL:0000148,1.89e-12,10;CL:0000541,1.89e-12,10;CL:0000147,4.68e-09,14;CL:0000133,1.62e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.00e-33;10!UBERON:0005564;7.00e-33;10!CL:0000031;1.20e-20;6 | |||
|ontology_enrichment_disease=DOID:3095!5.51e-20!22;DOID:2994!5.51e-20!22;DOID:3030!2.07e-13!1 | |ontology_enrichment_disease=DOID:3095!5.51e-20!22;DOID:2994!5.51e-20!22;DOID:3030!2.07e-13!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.61e-21;22!DOID:2994;2.61e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.70e-21,22;DOID:2994,2.70e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.71e-25!8;UBERON:0003135!3.27e-18!11;UBERON:0000991!9.69e-15!21;UBERON:0009196!9.69e-15!21;UBERON:0009117!9.69e-15!21;UBERON:0005564!9.69e-15!21;UBERON:0004176!4.54e-14!22;UBERON:0003101!3.04e-09!22;UBERON:0000079!3.04e-09!22 | |ontology_enrichment_uberon=UBERON:0000473!6.71e-25!8;UBERON:0003135!3.27e-18!11;UBERON:0000991!9.69e-15!21;UBERON:0009196!9.69e-15!21;UBERON:0009117!9.69e-15!21;UBERON:0005564!9.69e-15!21;UBERON:0004176!4.54e-14!22;UBERON:0003101!3.04e-09!22;UBERON:0000079!3.04e-09!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.73e-26;8!UBERON:0003135;2.24e-19;11!UBERON:0000991;1.04e-15;21!UBERON:0000922;3.73e-13;49!UBERON:0003101;7.74e-10;22!UBERON:0000079;7.74e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.84e-26,8;UBERON:0003135,2.35e-19,11;UBERON:0000991,1.08e-15,21;UBERON:0009196,1.08e-15,21;UBERON:0009117,1.08e-15,21;UBERON:0005564,1.08e-15,21;UBERON:0004176,5.55e-15,22;UBERON:0003101,7.92e-10,22;UBERON:0000079,7.92e-10,22;UBERON:0002323,3.85e-07,46;UBERON:0003133,7.72e-07,48 | |||
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|short_description=p2@CDYL | |short_description=p2@CDYL | ||
}} | }} |
Latest revision as of 04:11, 19 September 2015
Short description: | p2@CDYL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDYL_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -4bp_to_ENST00000483019_5end |
EntrezGene: | CDYL |
HGNC: | 1811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.13e-66 | 5 |
germ line cell | 3.55e-30 | 7 |
germ cell | 3.55e-30 | 7 |
neuron | 1.25e-20 | 6 |
neuroblast | 1.25e-20 | 6 |
electrically signaling cell | 1.25e-20 | 6 |
neuronal stem cell | 1.21e-15 | 8 |
melanocyte | 1.89e-12 | 10 |
melanoblast | 1.89e-12 | 10 |
pigment cell | 4.68e-09 | 14 |
neurectodermal cell | 1.62e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.84e-26 | 8 |
male reproductive organ | 2.35e-19 | 11 |
gonad | 1.08e-15 | 21 |
indifferent external genitalia | 1.08e-15 | 21 |
indifferent gonad | 1.08e-15 | 21 |
gonad primordium | 1.08e-15 | 21 |
external genitalia | 5.55e-15 | 22 |
male organism | 7.92e-10 | 22 |
male reproductive system | 7.92e-10 | 22 |
body cavity | 3.85e-07 | 46 |
reproductive organ | 7.72e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.70e-21 | 22 |
germ cell cancer | 2.70e-21 | 22 |