FFCP PHASE1:Hg19::chr15:75871275..75871295,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9661 | |||
|TSSclassifier=strong | |||
|UniProt=P43378 | |||
|association_with_transcript=329bp_to_NM_002833,uc002bal.2_5end | |||
|cluster_id=chr15:75871275..75871295,- | |||
|description=CAGE_peak_4_at_PTPN9_5end | |||
|id=chr15:75871275..75871295,- | |||
|ontology_enrichment_celltype=CL:0000766!1.17e-30!76;CL:0000557!3.54e-30!71;CL:0000738!1.46e-28!140;CL:0000839!1.45e-27!70;CL:0000763!1.77e-27!112;CL:0000049!1.77e-27!112;CL:0002009!6.82e-27!65;CL:0000037!1.65e-26!172;CL:0000566!1.65e-26!172;CL:0002194!1.14e-25!63;CL:0000576!1.14e-25!63;CL:0000040!1.14e-25!63;CL:0000559!1.14e-25!63;CL:0002032!3.49e-25!165;CL:0000837!3.49e-25!165;CL:0002057!4.25e-25!42;CL:0000988!1.48e-24!182;CL:0002031!2.19e-23!124;CL:0000860!5.58e-23!45;CL:0002087!8.95e-22!119;CL:0000115!1.63e-12!35;CL:0002139!3.95e-12!24;CL:0002078!9.04e-11!44;CL:0000071!6.76e-10!18;CL:0002546!6.76e-10!18;CL:0000048!6.30e-09!430;CL:0000134!1.03e-08!358;CL:0000213!1.25e-08!57;CL:0000215!1.25e-08!57;CL:0000723!6.76e-08!436;CL:0002320!1.12e-07!365;CL:0002393!3.24e-07!9;CL:0002397!3.24e-07!9;CL:0000034!5.73e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.33e-27;33!CL:0002057;9.33e-27;33!CL:0000473;2.45e-26;39!CL:0000234;2.45e-26;39!CL:0000576;8.16e-25;48!CL:0000766;2.15e-22;69!CL:0002139;1.34e-17;24!CL:0000115;3.88e-17;36!CL:0000071;4.02e-14;18!CL:0000763;6.18e-12;100!CL:0000738;5.28e-10;136!CL:0002078;2.82e-09;45!CL:1000413;1.07e-07;9!CL:0002087;1.45e-07;104!CL:0002393;1.94e-07;6!CL:0002397;1.94e-07;6!CL:0000990;4.27e-07;8!CL:0000213;7.50e-07;58!CL:0000215;7.50e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.01e-52,72;CL:0000557,3.20e-51,67;CL:0000839,7.26e-46,66;CL:0002009,8.44e-46,61;CL:0000763,1.16e-44,108;CL:0000049,1.16e-44,108;CL:0000473,2.01e-44,48;CL:0000234,2.01e-44,48;CL:0002194,9.11e-44,59;CL:0000576,9.11e-44,59;CL:0000040,9.11e-44,59;CL:0000559,9.11e-44,59;CL:0000860,8.37e-40,42;CL:0002057,8.37e-40,42;CL:0000738,3.08e-39,136;CL:0000037,2.69e-35,168;CL:0002032,3.72e-33,161;CL:0000837,3.72e-33,161;CL:0000988,1.81e-32,177;CL:0002031,1.28e-30,120;CL:0002087,4.58e-28,115;CL:0000115,2.18e-21,36;CL:0002139,1.07e-18,24;CL:0000071,4.50e-15,18;CL:0002546,4.50e-15,18;CL:0002078,9.20e-15,45;CL:0000213,4.20e-11,58;CL:0000215,4.20e-11,58;CL:0002393,9.77e-11,9;CL:0002397,9.77e-11,9;CL:0000134,7.44e-10,354;CL:0000048,3.35e-09,427;CL:0002320,4.61e-09,361;CL:0000723,1.36e-08,433;CL:1000413,1.89e-08,9;CL:0000034,4.23e-08,441;CL:0000219,1.44e-07,386;CL:0000990,5.52e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-27;42!CL:0002546;4.02e-14;18!CL:0000049;5.96e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.29e-33!216;UBERON:0002193!1.20e-30!112;UBERON:0002390!7.86e-28!102;UBERON:0003061!7.86e-28!102;UBERON:0002371!4.23e-26!80;UBERON:0002405!4.16e-25!115;UBERON:0001474!9.63e-22!86;UBERON:0004765!3.27e-19!101;UBERON:0001434!3.27e-19!101;UBERON:0002204!2.15e-12!167;UBERON:0000055!1.85e-11!69;UBERON:0004535!5.17e-11!110;UBERON:0001009!6.21e-11!113;UBERON:0001986!6.76e-10!18;UBERON:0004638!6.76e-10!18;UBERON:0004852!6.76e-10!18;UBERON:0001981!9.39e-10!60;UBERON:0007500!9.39e-10!60;UBERON:0004537!9.39e-10!60;UBERON:0006965!9.39e-10!60;UBERON:0002049!1.12e-09!79;UBERON:0007798!1.12e-09!79;UBERON:0004872!1.62e-09!84;UBERON:0000487!5.68e-07!22;UBERON:0006914!9.30e-07!25;UBERON:0002384!9.42e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.02e-14;18!UBERON:0001986;4.02e-14;18!UBERON:0004852;4.02e-14;18!UBERON:0000487;1.91e-10;22!UBERON:0006914;1.65e-08;25!UBERON:0003915;1.07e-07;9!UBERON:0004700;1.07e-07;9!UBERON:0001917;1.07e-07;9!UBERON:0000055;6.51e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.36e-51,108;UBERON:0002405,6.68e-50,93;UBERON:0003081,2.09e-47,203;UBERON:0002390,2.79e-46,98;UBERON:0003061,2.79e-46,98;UBERON:0002371,7.38e-46,76;UBERON:0001474,1.37e-40,82;UBERON:0004765,2.76e-37,90;UBERON:0001434,5.69e-31,100;UBERON:0000926,5.99e-20,315;UBERON:0004120,5.99e-20,315;UBERON:0006603,5.99e-20,315;UBERON:0002204,1.48e-16,167;UBERON:0004638,4.50e-15,18;UBERON:0001986,4.50e-15,18;UBERON:0004852,4.50e-15,18;UBERON:0000055,3.54e-13,68;UBERON:0004535,3.11e-11,109;UBERON:0000487,3.53e-11,22;UBERON:0001009,3.58e-11,112;UBERON:0007500,1.53e-10,59;UBERON:0001981,1.53e-10,59;UBERON:0004537,1.53e-10,59;UBERON:0006965,1.53e-10,59;UBERON:0002049,7.51e-10,78;UBERON:0007798,7.51e-10,78;UBERON:0004872,1.10e-09,83;UBERON:0006914,4.03e-09,25;UBERON:0003915,1.89e-08,9;UBERON:0004700,1.89e-08,9;UBERON:0001917,1.89e-08,9;UBERON:0002384,2.08e-08,371 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0,0,0,1.26343974685366,0.522371256399677,0.491467873003018,0,0.218441372130172,0.527533956456907,0.247532705920093,0.331397375727916,0,1.20538905604795,1.46062018077475,0.975865597581014,0.492484232307152,0.204000691244253,0,0,0,0.251085279189606,0.229240217243854,0.246301768349837,0.314843125254717,5.11373559903575,1.91914699048606,2.47705797305722,0.919421224478927,0.90361775633475,0,0.46480320348181,0.284338464974843,1.17440175733939,2.21598163412751,4.21143339687298,2.82114131930607,2.01523926815932,1.94336199611388,2.83333124397605,4.36194716338694,5.29026321164333,6.0646015296954,7.43772918098191,4.11167888021826,3.71647645074124,2.01384674625505,2.81776777182011,2.83778675866302,3.10271112662957,1.93645405075148,1.35426486594342,4.89430082810772,3.27487380069415,6.06753408001728,3.36692281607993,2.88836124368484,4.47535988059329,3.95821560224059,1.59570926097305,5.96714650745772,4.35313857942876,3.97169657283798,2.4912889959823,2.26123798731069,3.12889751052121,3.25783267057675,1.81619850790011,1.84138817993782,1.89877432464531,8.87272202510155,8.71677629856678,8.17668717482666,4.83013113929929,5.70672192797724,5.30394436100364,7.69534408101371,9.15016715115815,8.58521522693779,0,0,0.889509253863555,0.853460445133014,1.20118796110804,0,0,0.954053754535364,1.1384259382189,1.17447437874188,0.382273228125229,0,1.12101712596307,0,1.96709770113833,0,1.43921049299656,0.668745981562712,0.651844533267181,0.473447805734733,0,2.78526142212934,0.589211814949674,1.55073726208535,2.43723477388514,1.79327847615945,1.56071217071854,1.80881695064044,2.21080014228679,0.869409257205157,1.33457906845854,1.60524496853828,0,1.35971211237079,3.83220493601921,0,1.01207876807801,2.22995790026868,0.651083453856419,0.950452044448374,1.6563263098555,0.76791966692651,3.74792179657038,0.710331756132051,1.64225599384209,1.61285394579786,0.267440195783507,1.01377082717959,0,0.670700859703636,1.15076305659177,1.80719576192283,0.50133791063589,0.724232594804119,0.795285947051099,1.45990461090791,0.0945348171640679,0.221729397462564,0.527008714158756,0.327447688744282,1.09288586487763,0.370784442784429,2.27183175558278,3.65672448328461,4.38761269712255,0,0.571994910780128,1.48583000531826,2.98143611050058,1.72046919021225,4.85996702250632,7.91431118693613,4.19499436209906,1.6507082516404,1.67195973229448,1.8089173141853,2.13459757612026,2.00832367658802,1.20848795132744,2.28081631715554,2.92874469057803,2.94130464276695,1.62028389576352,2.58969212023831,2.91888184414021,3.37834441449967,1.53316637465883,4.74632829784064,2.74802615895611,1.31780417436063,3.87780264148325,0.436094052142534,2.48485975847659,1.13967460498122,0.132409180813219,0,0.709336764396714,1.12135520028461,1.06748995729705,0.74000264525148,0.622422070799533,1.21239604862719,1.14423332179421,0.908144565869588,0.576175924479999,0.937285727335186,0,1.1409436430889,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.413303124703062,1.18800285728205,0.494533858557114,1.82032272387605,0,0,0.250237039743928,0.554128230968366,0.438977620880838,0,0.901428353439581,1.02088964844019,0,0.213557388818567,0.423863802319124,0.600182192168805,0.412210116953756,0,0.18611685633159,0,0.487185025805993,0.504867548488229,0.184099797284599,0.323292113637624,0.355009592516614,0.604512589365842,0.508681776931463,0.773043412653187,0.272746120590835,2.00763216772303,0,0.265059536642971,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,0,1.39310378409594,0,0.354920400119532,0,0.723033089650446,0.220587945464788,0,0,0.539325232640658,0,0,5.90524363699719,1.40241773803446,0.8231480226628,1.47008711385542,1.26755034821831,0.982827216677626,0.590789906681404,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,2.07986957055916,0,0.231860809950154,0.469634776943287,2.30986316417718,1.85194205030644,1.33177906564219,0,0,3.69325509131096,1.8720341211139,2.67536092119711,2.81201501960331,1.17587489739202,0.141775097242386,0.0895585227028483,0,0.766765358330422,1.47798971368783,2.81754988842323,2.90259361757081,3.60299883542404,3.7872730027914,0.507983154337352,0.381988425558278,1.17217447210047,1.71072446022705,0.411309970813294,0.901029173531752,0.285826432630578,0.336393253036082,0,0.51336800074665,0.517086863031111,0,1.690605505112,0.531876233169741,4.16029747645464,0.514414748524284,0,1.0656887160644,0.285955987316295,0.542621605391443,0,0.65147236858747,0,0,1.20575750823834,0.871533458600294,0.99972991182057,2.43247561282381,2.00902836572851,2.10833939483032,0.718874566474748,1.14861935834114,0,0.144781306667579,0.821905290201534,0.537182889719687,0.448340575974109,0.985153801009636,1.07813787429759,0.641715181398742,0,0,0,0,0,0,2.99161459204025,2.07207756718018,0.12269149171914,0,0,0.623912584592421,0.178428988797162,0.473107245101804,0.117141414992713,0,0,0,0.664225598535437,0.737476674166813,0.347534457872331,0.195801157462741,0,3.101520391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| |||
|short_description=p4@PTPN9 | |||
}} |
Latest revision as of 03:55, 19 September 2015
Short description: | p4@PTPN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPN9_5end |
Coexpression cluster: | NA |
Association with transcript: | 329bp_to_NM_002833, uc002bal.2_5end |
EntrezGene: | PTPN9 |
HGNC: | 9661 |
UniProt: | P43378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.36e-51 | 108 |
immune system | 6.68e-50 | 93 |
lateral plate mesoderm | 2.09e-47 | 203 |
hematopoietic system | 2.79e-46 | 98 |
blood island | 2.79e-46 | 98 |
bone marrow | 7.38e-46 | 76 |
bone element | 1.37e-40 | 82 |
skeletal element | 2.76e-37 | 90 |
skeletal system | 5.69e-31 | 100 |
mesoderm | 5.99e-20 | 315 |
mesoderm-derived structure | 5.99e-20 | 315 |
presumptive mesoderm | 5.99e-20 | 315 |
musculoskeletal system | 1.48e-16 | 167 |
blood vessel endothelium | 4.50e-15 | 18 |
endothelium | 4.50e-15 | 18 |
cardiovascular system endothelium | 4.50e-15 | 18 |
vessel | 3.54e-13 | 68 |
cardiovascular system | 3.11e-11 | 109 |
simple squamous epithelium | 3.53e-11 | 22 |
circulatory system | 3.58e-11 | 112 |
epithelial tube open at both ends | 1.53e-10 | 59 |
blood vessel | 1.53e-10 | 59 |
blood vasculature | 1.53e-10 | 59 |
vascular cord | 1.53e-10 | 59 |
vasculature | 7.51e-10 | 78 |
vascular system | 7.51e-10 | 78 |
splanchnic layer of lateral plate mesoderm | 1.10e-09 | 83 |
squamous epithelium | 4.03e-09 | 25 |
endothelial tube | 1.89e-08 | 9 |
arterial system endothelium | 1.89e-08 | 9 |
endothelium of artery | 1.89e-08 | 9 |
connective tissue | 2.08e-08 | 371 |