FFCP PHASE1:Hg19::chr5:88179230..88179270,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:88179230..88179270,-
|short_description=p4@MEF2C
|description=CAGE_peak_4_at_MEF2C_5end
|association_with_transcript=12bp_to_NM_001193350,NM_002397_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4208 | |EntrezGene=4208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6996 | |HGNC=6996 | ||
|TSSclassifier=strong | |||
|UniProt=Q06413 | |UniProt=Q06413 | ||
|association_with_transcript=12bp_to_NM_001193350,NM_002397_5end | |||
|cluster_id=chr5:88179230..88179270,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_MEF2C_5end | |||
|id=chr5:88179230..88179270,- | |||
|ontology_enrichment_celltype=CL:0002057!6.28e-18!42;CL:0000763!1.71e-15!112;CL:0000049!1.71e-15!112;CL:0000860!8.38e-15!45;CL:0002009!9.32e-15!65;CL:0002194!5.63e-14!63;CL:0000576!5.63e-14!63;CL:0000040!5.63e-14!63;CL:0000559!5.63e-14!63;CL:0000037!1.13e-13!172;CL:0000566!1.13e-13!172;CL:0000766!8.10e-13!76;CL:0002032!2.32e-12!165;CL:0000837!2.32e-12!165;CL:0000988!6.53e-12!182;CL:0000557!7.29e-12!71;CL:0000738!5.04e-11!140;CL:0002087!4.13e-10!119;CL:0000839!1.35e-09!70;CL:0000945!1.52e-07!24;CL:0000826!1.52e-07!24;CL:0002031!2.71e-07!124;CL:0000236!4.91e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-14;33!CL:0002057;1.52e-14;33!CL:0000576;2.28e-14;48!CL:0000473;1.79e-13;39!CL:0000234;1.79e-13;39!CL:0000766;5.50e-10;69!CL:0000763;1.21e-07;100!CL:0000945;1.54e-07;24!CL:0000236;6.11e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.61e-21,48;CL:0000234,3.61e-21,48;CL:0002009,1.10e-20,61;CL:0000860,2.37e-20,42;CL:0002057,2.37e-20,42;CL:0000763,7.39e-20,108;CL:0000049,7.39e-20,108;CL:0002194,9.97e-20,59;CL:0000576,9.97e-20,59;CL:0000040,9.97e-20,59;CL:0000559,9.97e-20,59;CL:0000766,6.07e-19,72;CL:0000037,9.74e-19,168;CL:0000557,8.00e-18,67;CL:0000738,5.80e-17,136;CL:0002032,6.03e-17,161;CL:0000837,6.03e-17,161;CL:0000988,8.24e-17,177;CL:0000839,3.75e-15,66;CL:0002087,5.11e-15,115;CL:0002031,4.09e-12,120;CL:0000945,5.89e-08,24;CL:0000826,5.89e-08,24;CL:0000236,7.55e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;4.87e-15;42!CL:0000049;1.05e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-24!115;UBERON:0001049!7.38e-19!57;UBERON:0005068!7.38e-19!57;UBERON:0006241!7.38e-19!57;UBERON:0007135!7.38e-19!57;UBERON:0002780!1.68e-18!41;UBERON:0001890!1.68e-18!41;UBERON:0006240!1.68e-18!41;UBERON:0003080!2.20e-18!42;UBERON:0001017!1.09e-17!82;UBERON:0001869!2.58e-17!32;UBERON:0001893!3.64e-17!34;UBERON:0005743!8.15e-17!86;UBERON:0002616!1.03e-16!59;UBERON:0002791!1.49e-16!33;UBERON:0002020!4.57e-16!34;UBERON:0003528!4.57e-16!34;UBERON:0000073!6.13e-16!94;UBERON:0001016!6.13e-16!94;UBERON:0002619!8.87e-16!22;UBERON:0000956!2.07e-15!25;UBERON:0000203!2.07e-15!25;UBERON:0001950!5.38e-15!20;UBERON:0000955!2.04e-14!69;UBERON:0006238!2.04e-14!69;UBERON:0003075!4.13e-14!86;UBERON:0007284!4.13e-14!86;UBERON:0002346!9.14e-14!90;UBERON:0002390!3.64e-13!102;UBERON:0003061!3.64e-13!102;UBERON:0002193!2.09e-12!112;UBERON:0003056!4.03e-12!61;UBERON:0001474!9.66e-12!86;UBERON:0002371!2.40e-11!80;UBERON:0004765!1.24e-09!101;UBERON:0001434!1.24e-09!101;UBERON:0000479!2.12e-08!787;UBERON:0002204!6.89e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.68e-18;22!UBERON:0001869;9.58e-18;32!UBERON:0000956;2.31e-17;25!UBERON:0000203;2.31e-17;25!UBERON:0001950;4.49e-17;20!UBERON:0001893;1.08e-16;34!UBERON:0002791;3.36e-16;32!UBERON:0003528;8.95e-16;34!UBERON:0002020;8.95e-16;34!UBERON:0002780;5.35e-15;41!UBERON:0001890;5.35e-15;41!UBERON:0000073;9.03e-11;53!UBERON:0002616;9.03e-11;53!UBERON:0001017;2.95e-08;75!UBERON:0000955;1.30e-07;68!UBERON:0007023;1.46e-07;114!UBERON:0001016;2.63e-07;83 | |||
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| ||
|short_description=p4@MEF2C | |||
}} | }} |
Latest revision as of 03:52, 19 September 2015
Short description: | p4@MEF2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MEF2C_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 12bp_to_NM_001193350, NM_002397_5end |
EntrezGene: | MEF2C |
HGNC: | 6996 |
UniProt: | Q06413 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.61e-21 | 48 |
phagocyte | 3.61e-21 | 48 |
macrophage dendritic cell progenitor | 1.10e-20 | 61 |
classical monocyte | 2.37e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.37e-20 | 42 |
myeloid cell | 7.39e-20 | 108 |
common myeloid progenitor | 7.39e-20 | 108 |
monopoietic cell | 9.97e-20 | 59 |
monocyte | 9.97e-20 | 59 |
monoblast | 9.97e-20 | 59 |
promonocyte | 9.97e-20 | 59 |
myeloid leukocyte | 6.07e-19 | 72 |
hematopoietic stem cell | 9.74e-19 | 168 |
granulocyte monocyte progenitor cell | 8.00e-18 | 67 |
leukocyte | 5.80e-17 | 136 |
hematopoietic oligopotent progenitor cell | 6.03e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.03e-17 | 161 |
hematopoietic cell | 8.24e-17 | 177 |
myeloid lineage restricted progenitor cell | 3.75e-15 | 66 |
nongranular leukocyte | 5.11e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 4.09e-12 | 120 |
lymphocyte of B lineage | 5.89e-08 | 24 |
pro-B cell | 5.89e-08 | 24 |
B cell | 7.55e-08 | 14 |