FFCP PHASE1:Hg19::chr1:183560035..183560064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4688 | |EntrezGene=4688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |HGNC=7661 | ||
|TSSclassifier=strong | |||
|UniProt=P19878 | |UniProt=P19878 | ||
|association_with_transcript=0bp_to_NM_001127651,uc001gqk.3_5end | |association_with_transcript=0bp_to_NM_001127651,uc001gqk.3_5end | ||
|cluster_id=chr1:183560035..183560064,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_NCF2_5end | |description=CAGE_peak_3_at_NCF2_5end | ||
|id=chr1:183560035..183560064,- | |id=chr1:183560035..183560064,- | ||
|ontology_enrichment_celltype=CL:0000766!9.16e-53!76;CL:0002009!1.20e-52!65;CL:0000738!1.77e-51!140;CL:0002194!2.64e-51!63;CL:0000576!2.64e-51!63;CL:0000040!2.64e-51!63;CL:0000559!2.64e-51!63;CL:0000037!4.45e-48!172;CL:0000566!4.45e-48!172;CL:0000557!6.63e-46!71;CL:0002087!1.06e-45!119;CL:0000763!4.31e-45!112;CL:0000049!4.31e-45!112;CL:0002032!1.41e-44!165;CL:0000837!1.41e-44!165;CL:0000988!4.89e-44!182;CL:0000839!1.52e-43!70;CL:0002057!1.40e-42!42;CL:0000860!3.09e-41!45;CL:0002031!9.31e-41!124;CL:0002393!4.69e-09!9;CL:0002397!4.69e-09!9;CL:0000094!3.66e-08!8;CL:0000134!6.06e-08!358;CL:0002320!3.17e-07!365;CL:0000451!4.85e-07!10 | |ontology_enrichment_celltype=CL:0000766!9.16e-53!76;CL:0002009!1.20e-52!65;CL:0000738!1.77e-51!140;CL:0002194!2.64e-51!63;CL:0000576!2.64e-51!63;CL:0000040!2.64e-51!63;CL:0000559!2.64e-51!63;CL:0000037!4.45e-48!172;CL:0000566!4.45e-48!172;CL:0000557!6.63e-46!71;CL:0002087!1.06e-45!119;CL:0000763!4.31e-45!112;CL:0000049!4.31e-45!112;CL:0002032!1.41e-44!165;CL:0000837!1.41e-44!165;CL:0000988!4.89e-44!182;CL:0000839!1.52e-43!70;CL:0002057!1.40e-42!42;CL:0000860!3.09e-41!45;CL:0002031!9.31e-41!124;CL:0002393!4.69e-09!9;CL:0002397!4.69e-09!9;CL:0000094!3.66e-08!8;CL:0000134!6.06e-08!358;CL:0002320!3.17e-07!365;CL:0000451!4.85e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.64e-59;33!CL:0002057;4.64e-59;33!CL:0000473;7.30e-58;39!CL:0000234;7.30e-58;39!CL:0000576;3.62e-50;48!CL:0000766;1.47e-39;69!CL:0000763;3.55e-20;100!CL:0002087;7.00e-17;104!CL:0000738;1.27e-16;136!CL:0000094;4.62e-14;8!CL:0000235;1.11e-11;6!CL:0002393;2.29e-11;6!CL:0002397;2.29e-11;6!CL:0000081;8.58e-10;11!CL:0000988;1.06e-09;177!CL:0000840;1.05e-07;5!CL:0000219;6.98e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.64e-98,72;CL:0002194,4.13e-93,59;CL:0000576,4.13e-93,59;CL:0000040,4.13e-93,59;CL:0000559,4.13e-93,59;CL:0002009,1.08e-92,61;CL:0000473,1.12e-90,48;CL:0000234,1.12e-90,48;CL:0000557,6.61e-83,67;CL:0000839,1.69e-81,66;CL:0000860,6.65e-80,42;CL:0002057,6.65e-80,42;CL:0000738,2.39e-70,136;CL:0000763,7.92e-70,108;CL:0000049,7.92e-70,108;CL:0002087,1.01e-63,115;CL:0000037,2.26e-59,168;CL:0002031,4.75e-56,120;CL:0002032,8.70e-56,161;CL:0000837,8.70e-56,161;CL:0000988,3.24e-55,177;CL:0000134,2.84e-17,354;CL:0002320,1.61e-16,361;CL:0002393,8.57e-16,9;CL:0002397,8.57e-16,9;CL:0000094,4.23e-14,8;CL:0000219,6.83e-14,386;CL:0000235,1.11e-11,6;CL:0000723,2.52e-11,433;CL:0000034,2.74e-11,441;CL:0000048,2.98e-11,427;CL:0000081,8.06e-10,11;CL:0000840,9.08e-08,5;CL:0001029,9.08e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.60e-57;42!CL:0000049;1.91e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-51!102;UBERON:0003061!1.14e-51!102;UBERON:0002193!1.25e-47!112;UBERON:0002371!2.59e-41!80;UBERON:0001474!1.54e-36!86;UBERON:0002405!2.48e-30!115;UBERON:0004765!3.17e-29!101;UBERON:0001434!3.17e-29!101;UBERON:0003081!1.29e-15!216;UBERON:0002204!3.63e-11!167;UBERON:0000178!3.74e-09!15;UBERON:0000179!3.74e-09!15;UBERON:0000463!3.74e-09!15;UBERON:0007023!1.47e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.25e-15;15!UBERON:0000179;8.25e-15;15!UBERON:0000463;8.25e-15;15!UBERON:0002390;1.65e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.08e-86,98;UBERON:0003061,2.08e-86,98;UBERON:0002193,7.10e-79,108;UBERON:0002371,4.28e-71,76;UBERON:0001474,1.19e-64,82;UBERON:0002405,1.20e-63,93;UBERON:0004765,2.17e-57,90;UBERON:0001434,6.07e-50,100;UBERON:0003081,1.31e-34,203;UBERON:0002204,3.37e-24,167;UBERON:0002384,3.84e-16,371;UBERON:0000926,3.74e-15,315;UBERON:0004120,3.74e-15,315;UBERON:0006603,3.74e-15,315;UBERON:0000178,8.15e-15,15;UBERON:0000179,8.15e-15,15;UBERON:0000463,8.15e-15,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,11.7676644851845,12.3150884174919,11.4130632904835,13.7677496897116,16.8884935162774,19.8164637844577,0,0,1.84877005083394,0,0.142169232487422,0.293600439334847,22.1598163412751,20.8566225368947,20.8330435887218,16.3458296195145,20.4053009591957,20.0908942754665,77.497261269508,79.35394817465,46.8187238092485,90.4148953563113,90.4569353648017,49.2433129723215,105.007723197585,91.4493722308889,46.1140348282741,92.0470967566771,68.4213764598856,41.9822108442459,90.5445653199929,89.5132172189734,56.4055945957162,94.273838850238,99.487998393589,42.1962503027367,76.5255016433181,81.1817086520042,37.9340027974098,132.335412814634,136.739839150565,80.3440701204292,94.7207468017922,75.6150231709292,39.5283697363312,128.950094060908,142.1551674912,81.6472959597482,9.29523259772544,16.1579267973433,9.22498040236854,34.8218756554135,36.3428080676445,22.3408565508941,10.2604587746849,6.96208370196815,8.03722276564389,0,0,0,0.426730222566507,0.400395987036012,1.14950487990897,0,0,0,0.587237189370939,0.764546456250458,0,4.48406850385229,0.526768169550154,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.752875595388864,0.895906278080929,1.24930726552346,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,35.3756659083605,34.1294285106564,36.1645652611313,1.66943437013739,1.71598473234038,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,7.9068250461638,15.511210565933,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.502644862058154,0,0,0,0,0,0,0,0,0.190254152234598,0,0,22.6519645600406,21.2943881276706,19.7679445844009,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,21.8922805154143,15.0677127429638,18.9750545534728,0,0,0,0,0,0,0,0.591092280605782,0,0.898401253958239,0,0,0,0.167516265334349,0,11.2351053592077,2.99161459204025,16.1622050240054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71809722777571,9.05999643438191,9.17856997109621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.577332676353072,2.01090682660736,1.08890984861323,0.941438007767792,0,0,0,0,8.62660935694688,4.58782324285425,5.69647187174163,4.52640373369799,6.17043409629291,11.0240462902762,8.10047155857172,5.55187623405989,0,0,0,0,0,0,0,0,2.68107518185313,0.211673582723883,0.649243880549111,0.842391534340376,0.456469358066384,0,0,0,0.481764225311099,0.80719882876419,2.12923118845163,2.06103206853459,0.614481528616916,0.894704431569664,0.834245708559542,1.9538809540204,0,0,0,0,0,0,1.17206543417515,0,1.00299045849731,0,0,0.296964680832639,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0,0,0,2.09244169283818,0,0.0898683511473268,0.358042349351218,0.511572370226872,0,11.974154617347,0,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0.417687798021821,0,0,0,0,0,0,0,0,0,0.758238955541855,0.300646838828985,0,0,0,0,0,0,0,0,0.391969589657511,0,0.698906672968121,0,0.0967563312890851,0.146178634172371,0,0,0,0.451961481561065,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0.446342914883745,0,0,0,0,0,0,0,5.08039992394707,0.795229689809303,0.272406812223151,0,0,0,1.349843349309,0.77380195455795,0.121499113316049,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0.258565912723101,0.13223260174269,0,0,3.31040978959853,0.628817220398664,6.62782488555513,2.97699613087171,0.395223263795889,0.243585196761792,1.27668251554036,0,0.5013797880454,0,0,0,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0.398594520940089,0.490696182767533,0,0,0.422624246717254,0.39997479170986,0,0.172214979660816,0,0,0.839277046316667,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.392590874004102,0.11796972334774,0.366857197043358,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,1.4980418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| ||
|short_description=p3@NCF2 | |short_description=p3@NCF2 | ||
}} | }} |
Latest revision as of 03:47, 19 September 2015
Short description: | p3@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NCF2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_NM_001127651, uc001gqk.3_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | P19878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.08e-86 | 98 |
blood island | 2.08e-86 | 98 |
hemolymphoid system | 7.10e-79 | 108 |
bone marrow | 4.28e-71 | 76 |
bone element | 1.19e-64 | 82 |
immune system | 1.20e-63 | 93 |
skeletal element | 2.17e-57 | 90 |
skeletal system | 6.07e-50 | 100 |
lateral plate mesoderm | 1.31e-34 | 203 |
musculoskeletal system | 3.37e-24 | 167 |
connective tissue | 3.84e-16 | 371 |
mesoderm | 3.74e-15 | 315 |
mesoderm-derived structure | 3.74e-15 | 315 |
presumptive mesoderm | 3.74e-15 | 315 |
blood | 8.15e-15 | 15 |
haemolymphatic fluid | 8.15e-15 | 15 |
organism substance | 8.15e-15 | 15 |