FFCP PHASE1:Hg19::chr1:183560016..183560033,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:183560016..183560033,- to FFCP PHASE1:Hg19::chr1:183560016..183560033,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4688 | |EntrezGene=4688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |HGNC=7661 | ||
|TSSclassifier=strong | |||
|UniProt=P19878 | |UniProt=P19878 | ||
|association_with_transcript=-5bp_to_ENST00000367536_5end | |||
|cluster_id=chr1:183560016..183560033,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_NCF2_5end | |||
|id=chr1:183560016..183560033,- | |||
|ontology_enrichment_celltype=CL:0000766!1.30e-58!76;CL:0002194!4.00e-58!63;CL:0000576!4.00e-58!63;CL:0000040!4.00e-58!63;CL:0000559!4.00e-58!63;CL:0002009!1.11e-57!65;CL:0000763!3.88e-56!112;CL:0000049!3.88e-56!112;CL:0000037!3.19e-55!172;CL:0000566!3.19e-55!172;CL:0000738!4.49e-55!140;CL:0000988!8.45e-54!182;CL:0002032!3.00e-53!165;CL:0000837!3.00e-53!165;CL:0000557!7.48e-51!71;CL:0002057!1.20e-50!42;CL:0002087!3.75e-50!119;CL:0000839!4.95e-50!70;CL:0000860!4.66e-46!45;CL:0002031!9.64e-44!124;CL:0002393!1.22e-10!9;CL:0002397!1.22e-10!9;CL:0000134!1.45e-10!358;CL:0002320!8.01e-10!365;CL:0000219!2.63e-07!390;CL:0000094!2.67e-07!8;CL:0000990!4.87e-07!8;CL:0000451!7.58e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.74e-68;33!CL:0002057;8.74e-68;33!CL:0000473;2.37e-66;39!CL:0000234;2.37e-66;39!CL:0000576;1.05e-57;48!CL:0000766;2.34e-45;69!CL:0000763;9.41e-23;100!CL:0002087;4.62e-20;104!CL:0000738;4.66e-18;136!CL:0000235;3.94e-13;6!CL:0002393;4.90e-13;6!CL:0002397;4.90e-13;6!CL:0000094;2.05e-12;8!CL:0000988;1.75e-10;177!CL:0000081;1.01e-08;11!CL:0000219;2.77e-07;193!CL:0000775;2.92e-07;3!CL:0002619;3.19e-07;3!CL:0000226;7.20e-07;3!CL:0000842;7.20e-07;3!CL:0000767;7.60e-07;3!CL:0000875;8.35e-07;3!CL:0002396;8.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.12e-106,72;CL:0000473,1.82e-104,48;CL:0000234,1.82e-104,48;CL:0002194,1.33e-103,59;CL:0000576,1.33e-103,59;CL:0000040,1.33e-103,59;CL:0000559,1.33e-103,59;CL:0002009,9.79e-100,61;CL:0000860,4.12e-92,42;CL:0002057,4.12e-92,42;CL:0000839,4.42e-91,66;CL:0000557,1.67e-89,67;CL:0000738,1.31e-75,136;CL:0000763,4.64e-75,108;CL:0000049,4.64e-75,108;CL:0002087,4.12e-74,115;CL:0000037,6.03e-65,168;CL:0002031,2.00e-63,120;CL:0002032,1.44e-62,161;CL:0000837,1.44e-62,161;CL:0000988,1.16e-60,177;CL:0000134,1.31e-20,354;CL:0002320,7.80e-20,361;CL:0002393,3.31e-18,9;CL:0002397,3.31e-18,9;CL:0000219,4.13e-17,386;CL:0000034,4.58e-14,441;CL:0000723,5.36e-14,433;CL:0000048,8.52e-14,427;CL:0000235,3.86e-13,6;CL:0000094,1.68e-12,8;CL:0000081,8.74e-09,11;CL:0000775,2.89e-07,3;CL:0002619,3.15e-07,3;CL:0000767,6.15e-07,3;CL:0000226,7.60e-07,3;CL:0000842,7.60e-07,3;CL:0000875,8.27e-07,3;CL:0002396,8.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-65;42!CL:0000049;4.07e-23;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.36e-58!102;UBERON:0003061!4.36e-58!102;UBERON:0002193!3.86e-53!112;UBERON:0002371!5.89e-44!80;UBERON:0001474!2.73e-39!86;UBERON:0004765!1.37e-33!101;UBERON:0001434!1.37e-33!101;UBERON:0002405!3.66e-31!115;UBERON:0003081!1.08e-15!216;UBERON:0002204!1.28e-13!167;UBERON:0000178!2.89e-12!15;UBERON:0000179!2.89e-12!15;UBERON:0000463!2.89e-12!15;UBERON:0002384!3.38e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.73e-14;15!UBERON:0000179;5.73e-14;15!UBERON:0000463;5.73e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-86,98;UBERON:0003061,1.05e-86,98;UBERON:0002193,1.54e-79,108;UBERON:0002371,3.77e-77,76;UBERON:0001474,2.09e-70,82;UBERON:0002405,4.05e-65,93;UBERON:0004765,8.40e-63,90;UBERON:0001434,5.35e-55,100;UBERON:0003081,8.81e-33,203;UBERON:0002204,8.11e-27,167;UBERON:0002384,8.87e-19,371;UBERON:0000926,5.23e-15,315;UBERON:0004120,5.23e-15,315;UBERON:0006603,5.23e-15,315;UBERON:0000178,6.52e-14,15;UBERON:0000179,6.52e-14,15;UBERON:0000463,6.52e-14,15 | |||
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|short_description=p8@NCF2 | |||
}} | }} |
Latest revision as of 03:46, 19 September 2015
Short description: | p8@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NCF2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -5bp_to_ENST00000367536_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | P19878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-86 | 98 |
blood island | 1.05e-86 | 98 |
hemolymphoid system | 1.54e-79 | 108 |
bone marrow | 3.77e-77 | 76 |
bone element | 2.09e-70 | 82 |
immune system | 4.05e-65 | 93 |
skeletal element | 8.40e-63 | 90 |
skeletal system | 5.35e-55 | 100 |
lateral plate mesoderm | 8.81e-33 | 203 |
musculoskeletal system | 8.11e-27 | 167 |
connective tissue | 8.87e-19 | 371 |
mesoderm | 5.23e-15 | 315 |
mesoderm-derived structure | 5.23e-15 | 315 |
presumptive mesoderm | 5.23e-15 | 315 |
blood | 6.52e-14 | 15 |
haemolymphatic fluid | 6.52e-14 | 15 |
organism substance | 6.52e-14 | 15 |