FFCP PHASE1:Hg19::chr12:53895052..53895143,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:53895052..53895143,+
|short_description=p1@TARBP2
|description=CAGE_peak_1_at_TARBP2_5end
|association_with_transcript=0bp_to_ENST00000546889,ENST00000547...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6895 | |EntrezGene=6895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11569 | |HGNC=11569 | ||
|TSSclassifier=strong | |||
|UniProt=F8VTT7,F8VWR8,F8VW32 | |UniProt=F8VTT7,F8VWR8,F8VW32 | ||
|association_with_transcript=0bp_to_ENST00000546889,ENST00000547388,ENST00000548971,ENST00000549610,ENST00000552650,ENST00000552857_5end | |||
|cluster_id=chr12:53895052..53895143,+ | |||
|coexpression_cluster_id=C1357 | |||
|description=CAGE_peak_1_at_TARBP2_5end | |||
|id=chr12:53895052..53895143,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.52e-30!248;CL:0000220!1.39e-29!246;CL:0000548!2.32e-27!679;CL:0000004!2.32e-27!679;CL:0000255!2.32e-27!679;CL:0000012!9.73e-27!682;CL:0000144!4.59e-22!625;CL:0000055!3.44e-21!180;CL:0000222!1.06e-20!119;CL:0000066!8.68e-19!254;CL:0002371!2.75e-16!591;CL:0000003!4.71e-16!722;CL:0000183!1.49e-13!59;CL:0000393!1.72e-13!60;CL:0000211!1.72e-13!60;CL:0000187!3.31e-11!54;CL:0000680!9.45e-11!57;CL:0000056!9.45e-11!57;CL:0000355!9.45e-11!57;CL:0000115!2.76e-10!35;CL:0000213!5.30e-10!57;CL:0000215!5.30e-10!57;CL:0002078!1.11e-09!44;CL:0000192!1.82e-09!42;CL:0000514!1.82e-09!42;CL:0002139!3.92e-08!24;CL:0000071!4.17e-08!18;CL:0002546!4.17e-08!18;CL:0000359!9.22e-08!32;CL:1000449!2.27e-07!16;CL:0000221!3.39e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.41e-09;36!CL:0000071;4.18e-08;18!CL:0002139;4.18e-08;24!CL:1000449;9.02e-08;15!CL:0000359;1.80e-07;32!CL:0000393;4.65e-07;61!CL:0000211;4.65e-07;61!CL:0002078;6.65e-07;45!CL:0000192;8.15e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.47e-31,250;CL:0000222,5.55e-21,121;CL:0000066,7.58e-19,253;CL:0000393,2.76e-13,61;CL:0000211,2.76e-13,61;CL:0000187,5.10e-11,55;CL:0000115,9.81e-11,36;CL:0000680,1.40e-10,58;CL:0000056,1.40e-10,58;CL:0000355,1.40e-10,58;CL:0000213,2.11e-10,58;CL:0000215,2.11e-10,58;CL:0002078,4.23e-10,45;CL:0000192,2.87e-09,43;CL:0000514,2.87e-09,43;CL:0002139,3.92e-08,24;CL:0000071,4.17e-08,18;CL:0002546,4.17e-08,18;CL:1000449,8.74e-08,15;CL:0000359,9.22e-08,32;CL:0000221,2.14e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002546;4.18e-08;18!CL:0000514;8.15e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.35e-15!118;UBERON:0002049!2.44e-14!79;UBERON:0007798!2.44e-14!79;UBERON:0000055!5.38e-13!69;UBERON:0004872!1.58e-12!84;UBERON:0001981!1.07e-11!60;UBERON:0007500!1.07e-11!60;UBERON:0004537!1.07e-11!60;UBERON:0006965!1.07e-11!60;UBERON:0005256!3.57e-11!143;UBERON:0000490!3.71e-11!138;UBERON:0001637!4.13e-11!42;UBERON:0003509!4.13e-11!42;UBERON:0004572!4.13e-11!42;UBERON:0000486!5.12e-11!82;UBERON:0002100!1.58e-10!216;UBERON:0004290!1.77e-10!70;UBERON:0003104!1.78e-10!238;UBERON:0009142!1.78e-10!238;UBERON:0000914!2.09e-10!83;UBERON:0002329!2.09e-10!83;UBERON:0003077!2.09e-10!83;UBERON:0003059!2.09e-10!83;UBERON:0007282!2.09e-10!83;UBERON:0009618!2.09e-10!83;UBERON:0007285!2.09e-10!83;UBERON:0004535!1.79e-09!110;UBERON:0001009!8.94e-09!113;UBERON:0001134!1.48e-08!61;UBERON:0002036!1.48e-08!61;UBERON:0003082!1.48e-08!61;UBERON:0001986!4.17e-08!18;UBERON:0004638!4.17e-08!18;UBERON:0004852!4.17e-08!18;UBERON:0000487!6.39e-08!22;UBERON:0002385!1.50e-07!63;UBERON:0001015!1.50e-07!63;UBERON:0000383!1.50e-07!63;UBERON:0004211!2.27e-07!16;UBERON:0001285!2.27e-07!16;UBERON:0007684!2.27e-07!16;UBERON:0003220!2.27e-07!16;UBERON:0004208!2.27e-07!16;UBERON:0004573!2.33e-07!33;UBERON:0004571!2.33e-07!33;UBERON:0006914!3.53e-07!25;UBERON:0006555!6.32e-07!17;UBERON:0005103!6.32e-07!17;UBERON:0000083!6.32e-07!17;UBERON:0009201!6.32e-07!17;UBERON:0004819!6.32e-07!17;UBERON:0006553!6.32e-07!17;UBERON:0003074!6.32e-07!17;UBERON:0003060!6.32e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.01e-09;74!UBERON:0007500;5.82e-09;56!UBERON:0001981;5.82e-09;56!UBERON:0004537;5.82e-09;56!UBERON:0001637;1.41e-08;42!UBERON:0003509;1.41e-08;42!UBERON:0004572;1.41e-08;42!UBERON:0004638;4.18e-08;18!UBERON:0001986;4.18e-08;18!UBERON:0004852;4.18e-08;18!UBERON:0000055;6.62e-08;65!UBERON:0000487;7.07e-08;22!UBERON:0006555;9.02e-08;15!UBERON:0004819;9.02e-08;15!UBERON:0001285;9.02e-08;15!UBERON:0007684;9.02e-08;15!UBERON:0000490;1.33e-07;33!UBERON:0002049;3.72e-07;75!UBERON:0007798;3.72e-07;75!UBERON:0006914;4.05e-07;25!UBERON:0000025;5.79e-07;93!UBERON:0004573;7.96e-07;33!UBERON:0004571;7.96e-07;33 | |||
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| ||
|short_description=p1@TARBP2 | |||
}} | }} |
Latest revision as of 03:30, 19 September 2015
Short description: | p1@TARBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TARBP2_5end |
Coexpression cluster: | C1357_Mesenchymal_Alveolar_Renal_Placental_acantholytic_Tracheal_Bronchial |
Association with transcript: | 0bp_to_ENST00000546889, ENST00000547388, ENST00000548971, ENST00000549610, ENST00000552650, ENST00000552857_5end |
EntrezGene: | TARBP2 |
HGNC: | 11569 |
UniProt: | F8VTT7F8VWR8F8VW32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.47e-31 | 250 |
mesodermal cell | 5.55e-21 | 121 |
epithelial cell | 7.58e-19 | 253 |
electrically responsive cell | 2.76e-13 | 61 |
electrically active cell | 2.76e-13 | 61 |
muscle cell | 5.10e-11 | 55 |
endothelial cell | 9.81e-11 | 36 |
muscle precursor cell | 1.40e-10 | 58 |
myoblast | 1.40e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-10 | 58 |
lining cell | 2.11e-10 | 58 |
barrier cell | 2.11e-10 | 58 |
meso-epithelial cell | 4.23e-10 | 45 |
smooth muscle cell | 2.87e-09 | 43 |
smooth muscle myoblast | 2.87e-09 | 43 |
endothelial cell of vascular tree | 3.92e-08 | 24 |
blood vessel endothelial cell | 4.17e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.17e-08 | 18 |
epithelial cell of nephron | 8.74e-08 | 15 |
vascular associated smooth muscle cell | 9.22e-08 | 32 |
ectodermal cell | 2.14e-07 | 72 |