FFCP PHASE1:Hg19::chr17:2304082..2304103,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7188 | |||
|TSSclassifier=strong | |||
|UniProt=Q99583 | |||
|association_with_transcript=154bp_to_NM_020310,uc002fur.2_5end | |||
|cluster_id=chr17:2304082..2304103,- | |||
|description=CAGE_peak_5_at_MNT_5end | |||
|id=chr17:2304082..2304103,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.06e-09!86;UBERON:0007284!1.06e-09!86;UBERON:0007023!1.18e-09!115;UBERON:0002346!2.77e-09!90;UBERON:0002619!1.65e-08!22;UBERON:0001893!2.76e-08!34;UBERON:0001049!2.93e-08!57;UBERON:0005068!2.93e-08!57;UBERON:0006241!2.93e-08!57;UBERON:0007135!2.93e-08!57;UBERON:0002780!5.27e-08!41;UBERON:0001890!5.27e-08!41;UBERON:0006240!5.27e-08!41;UBERON:0001869!6.40e-08!32;UBERON:0002020!7.48e-08!34;UBERON:0003528!7.48e-08!34;UBERON:0002791!8.10e-08!33;UBERON:0001950!9.55e-08!20;UBERON:0003080!1.93e-07!42;UBERON:0000956!4.81e-07!25;UBERON:0000203!4.81e-07!25;UBERON:0003056!6.29e-07!61;UBERON:0002616!7.33e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.56e-10;20!UBERON:0002619;4.14e-09;22!UBERON:0001870;1.27e-08;3!UBERON:0001869;5.62e-08;32!UBERON:0001893;7.94e-08;34!UBERON:0000956;8.01e-08;25!UBERON:0000203;8.01e-08;25!UBERON:0000200;3.53e-07;6!UBERON:0002298;6.77e-07;6!UBERON:0002791;8.08e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.98e-10,53;UBERON:0002616,1.98e-10,53;UBERON:0010371,2.24e-10,104;UBERON:0003075,4.77e-10,82;UBERON:0007284,4.77e-10,82;UBERON:0001950,6.14e-10,20;UBERON:0001049,1.19e-09,56;UBERON:0005068,1.19e-09,56;UBERON:0006241,1.19e-09,56;UBERON:0007135,1.19e-09,56;UBERON:0002346,2.51e-09,86;UBERON:0001893,5.85e-09,34;UBERON:0002619,6.75e-09,22;UBERON:0003056,1.23e-08,61;UBERON:0002780,2.51e-08,41;UBERON:0001890,2.51e-08,41;UBERON:0003080,2.51e-08,41;UBERON:0006240,2.51e-08,41;UBERON:0001869,3.65e-08,32;UBERON:0000955,3.84e-08,68;UBERON:0006238,3.84e-08,68;UBERON:0001870,5.96e-08,3;UBERON:0000956,1.22e-07,25;UBERON:0000203,1.22e-07,25;UBERON:0003528,1.69e-07,34;UBERON:0002020,1.69e-07,34;UBERON:0001016,1.69e-07,89;UBERON:0001017,4.65e-07,81;UBERON:0002298,4.78e-07,6;UBERON:0007023,6.27e-07,114;UBERON:0000200,7.04e-07,6;UBERON:0002791,8.48e-07,32 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0.37129905888014,1.32558950291166,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,0.152826811495903,0.164201178899891,0.236132343941038,0.786728553697808,1.15148819429164,0.619264493264304,0,0.6024118375565,0.739508020333575,0.542270404062111,0.284338464974843,0.293600439334847,1.10799081706375,1.40381113229099,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.436194716338694,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0,0.320929027076094,0.639337125799041,1.31940520074686,0.598390972864896,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0.736555271975129,0,0.422510572623884,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0.39783335439818,0.547992461293902,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,1.14681968437569,0,1.68152568894461,0,1.37696839079683,0.786021525498329,0.822405995998037,0.334372990781356,0,0.473447805734733,0,0.222820913770347,0,0,0,0,0.260118695119756,0,0,0.289803085735052,0.444859689486181,0.267540828089713,2.09071047609954,0,0.383220493601921,0.34362744548263,0,0.637130828648193,1.30216690771284,0.950452044448374,0.451725357233318,0.255973222308837,0,0,0,1.20964045934839,1.06976078313403,1.01377082717959,0,0,0,0,0,0.144846518960824,0.795285947051099,0.973269740605272,0.378139268656271,0,0.263504357079378,0.392937226493138,0.364295288292542,0.370784442784429,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0.825354125820202,0,0,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0.549605231791222,0,0,0,0.993943903390637,0.25326102332916,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0,0,0.468642863667593,0.624320153660641,0,0.298897361103602,0.352303495931295,0.323745888736263,0.140450806702248,0.204154171254893,0.245668634623536,0.619954687054593,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0.538168907066586,0.427114777637135,0,0.600182192168805,0.618315175430633,0.257640540045629,0.18611685633159,0.506328996723799,0.292311015483596,0,0.184099797284599,0.323292113637624,0,0.302256294682921,0.169560592310488,0.193260853163297,0.272746120590835,1.14721838155602,0.121973706129595,0.132529768321485,0.116193942869518,0.621966330092223,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0.439001141634502,2.24803506515239,0.502644862058154,0.462942225792648,0.325808305310325,2.07986957055916,0,0.463721619900307,0.117408694235822,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,1.53353071666084,0.985326475791887,0.264145302039678,1.65862492432618,0.432359860250884,2.01987893482208,0.063497894292169,0.381988425558278,1.17217447210047,1.71072446022705,0,0,0,0.897048674762886,0.43596006883328,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0.299918973546171,2.43247561282381,0.502257091432126,2.10833939483032,0,1.14861935834114,0,0.289562613335158,0,0.358121926479791,0,0.394061520403854,1.94064817373566,0.641715181398742,0.254094624222463,0,0,0.502548796003046,0,0.749007023947182,0,0.414415513436035,0.49076596687656,0,0.542530047399471,0.207970861530807,0,0.315404830067869,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.521301686808497,0.587403472388222,0.343143423810856,0.620304078368662,0.862856803274467,1.17400313583789,0,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.482561763430822,0,0,0.355123450626254,0.328508624055237,0.519254429183621,0.232420756919918,0.120859449591622,0.200506470303285,0.460404944679482,0,0.364182336013434,0.524497659837696,1.80479845162965,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0,0.215915916102139,1.54227252690289,0.270946437543853,1.00337954770971,0,0,0,0,0,0,1.31205858279882,0.325378394664303,0.103041011647722,0.0915694648183434,0,1.14853107599234,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0.0890320356467374,0.495854746082934,0.384380134730212,0.382838137483752,0.30347334256665,0.929691098594572,0.94443704049192,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0.95460974377781,0,0.179872457583315,0.274537029736055,0.82468681641980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| |||
|short_description=p5@MNT | |||
}} |
Latest revision as of 03:16, 19 September 2015
Short description: | p5@MNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MNT_5end |
Coexpression cluster: | NA |
Association with transcript: | 154bp_to_NM_020310, uc002fur.2_5end |
EntrezGene: | MNT |
HGNC: | 7188 |
UniProt: | Q99583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.98e-10 | 53 |
regional part of brain | 1.98e-10 | 53 |
ecto-epithelium | 2.24e-10 | 104 |
neural plate | 4.77e-10 | 82 |
presumptive neural plate | 4.77e-10 | 82 |
neocortex | 6.14e-10 | 20 |
neural tube | 1.19e-09 | 56 |
neural rod | 1.19e-09 | 56 |
future spinal cord | 1.19e-09 | 56 |
neural keel | 1.19e-09 | 56 |
neurectoderm | 2.51e-09 | 86 |
telencephalon | 5.85e-09 | 34 |
regional part of cerebral cortex | 6.75e-09 | 22 |
pre-chordal neural plate | 1.23e-08 | 61 |
regional part of forebrain | 2.51e-08 | 41 |
forebrain | 2.51e-08 | 41 |
anterior neural tube | 2.51e-08 | 41 |
future forebrain | 2.51e-08 | 41 |
cerebral hemisphere | 3.65e-08 | 32 |
brain | 3.84e-08 | 68 |
future brain | 3.84e-08 | 68 |
frontal cortex | 5.96e-08 | 3 |
cerebral cortex | 1.22e-07 | 25 |
pallium | 1.22e-07 | 25 |
brain grey matter | 1.69e-07 | 34 |
gray matter | 1.69e-07 | 34 |
nervous system | 1.69e-07 | 89 |
central nervous system | 4.65e-07 | 81 |
brainstem | 4.78e-07 | 6 |
adult organism | 6.27e-07 | 114 |
gyrus | 7.04e-07 | 6 |
regional part of telencephalon | 8.48e-07 | 32 |