FFCP PHASE1:Hg19::chr17:2304082..2304103,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:2304082..2304103,-
|short_description=p5@MNT
|description=CAGE_peak_5_at_MNT_5end
|association_with_transcript=154bp_to_NM_020310,uc002fur.2_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4335 | |EntrezGene=4335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7188 | |HGNC=7188 | ||
|TSSclassifier=strong | |||
|UniProt=Q99583 | |UniProt=Q99583 | ||
|association_with_transcript=154bp_to_NM_020310,uc002fur.2_5end | |||
|cluster_id=chr17:2304082..2304103,- | |||
|description=CAGE_peak_5_at_MNT_5end | |||
|id=chr17:2304082..2304103,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.06e-09!86;UBERON:0007284!1.06e-09!86;UBERON:0007023!1.18e-09!115;UBERON:0002346!2.77e-09!90;UBERON:0002619!1.65e-08!22;UBERON:0001893!2.76e-08!34;UBERON:0001049!2.93e-08!57;UBERON:0005068!2.93e-08!57;UBERON:0006241!2.93e-08!57;UBERON:0007135!2.93e-08!57;UBERON:0002780!5.27e-08!41;UBERON:0001890!5.27e-08!41;UBERON:0006240!5.27e-08!41;UBERON:0001869!6.40e-08!32;UBERON:0002020!7.48e-08!34;UBERON:0003528!7.48e-08!34;UBERON:0002791!8.10e-08!33;UBERON:0001950!9.55e-08!20;UBERON:0003080!1.93e-07!42;UBERON:0000956!4.81e-07!25;UBERON:0000203!4.81e-07!25;UBERON:0003056!6.29e-07!61;UBERON:0002616!7.33e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.56e-10;20!UBERON:0002619;4.14e-09;22!UBERON:0001870;1.27e-08;3!UBERON:0001869;5.62e-08;32!UBERON:0001893;7.94e-08;34!UBERON:0000956;8.01e-08;25!UBERON:0000203;8.01e-08;25!UBERON:0000200;3.53e-07;6!UBERON:0002298;6.77e-07;6!UBERON:0002791;8.08e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.98e-10,53;UBERON:0002616,1.98e-10,53;UBERON:0010371,2.24e-10,104;UBERON:0003075,4.77e-10,82;UBERON:0007284,4.77e-10,82;UBERON:0001950,6.14e-10,20;UBERON:0001049,1.19e-09,56;UBERON:0005068,1.19e-09,56;UBERON:0006241,1.19e-09,56;UBERON:0007135,1.19e-09,56;UBERON:0002346,2.51e-09,86;UBERON:0001893,5.85e-09,34;UBERON:0002619,6.75e-09,22;UBERON:0003056,1.23e-08,61;UBERON:0002780,2.51e-08,41;UBERON:0001890,2.51e-08,41;UBERON:0003080,2.51e-08,41;UBERON:0006240,2.51e-08,41;UBERON:0001869,3.65e-08,32;UBERON:0000955,3.84e-08,68;UBERON:0006238,3.84e-08,68;UBERON:0001870,5.96e-08,3;UBERON:0000956,1.22e-07,25;UBERON:0000203,1.22e-07,25;UBERON:0003528,1.69e-07,34;UBERON:0002020,1.69e-07,34;UBERON:0001016,1.69e-07,89;UBERON:0001017,4.65e-07,81;UBERON:0002298,4.78e-07,6;UBERON:0007023,6.27e-07,114;UBERON:0000200,7.04e-07,6;UBERON:0002791,8.48e-07,32 | |||
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| ||
|short_description=p5@MNT | |||
}} | }} |
Latest revision as of 03:16, 19 September 2015
Short description: | p5@MNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MNT_5end |
Coexpression cluster: | NA |
Association with transcript: | 154bp_to_NM_020310, uc002fur.2_5end |
EntrezGene: | MNT |
HGNC: | 7188 |
UniProt: | Q99583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.98e-10 | 53 |
regional part of brain | 1.98e-10 | 53 |
ecto-epithelium | 2.24e-10 | 104 |
neural plate | 4.77e-10 | 82 |
presumptive neural plate | 4.77e-10 | 82 |
neocortex | 6.14e-10 | 20 |
neural tube | 1.19e-09 | 56 |
neural rod | 1.19e-09 | 56 |
future spinal cord | 1.19e-09 | 56 |
neural keel | 1.19e-09 | 56 |
neurectoderm | 2.51e-09 | 86 |
telencephalon | 5.85e-09 | 34 |
regional part of cerebral cortex | 6.75e-09 | 22 |
pre-chordal neural plate | 1.23e-08 | 61 |
regional part of forebrain | 2.51e-08 | 41 |
forebrain | 2.51e-08 | 41 |
anterior neural tube | 2.51e-08 | 41 |
future forebrain | 2.51e-08 | 41 |
cerebral hemisphere | 3.65e-08 | 32 |
brain | 3.84e-08 | 68 |
future brain | 3.84e-08 | 68 |
frontal cortex | 5.96e-08 | 3 |
cerebral cortex | 1.22e-07 | 25 |
pallium | 1.22e-07 | 25 |
brain grey matter | 1.69e-07 | 34 |
gray matter | 1.69e-07 | 34 |
nervous system | 1.69e-07 | 89 |
central nervous system | 4.65e-07 | 81 |
brainstem | 4.78e-07 | 6 |
adult organism | 6.27e-07 | 114 |
gyrus | 7.04e-07 | 6 |
regional part of telencephalon | 8.48e-07 | 32 |