FFCP PHASE1:Hg19::chr5:87564824..87564880,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505894 | |EntrezGene=100505894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000496733,ENST00000501715,ENST00000504636,ENST00000504769,ENST00000506584,ENST00000510087,ENST00000512724,NR_039994,uc003kje.2_5end | |association_with_transcript=0bp_to_ENST00000496733,ENST00000501715,ENST00000504636,ENST00000504769,ENST00000506584,ENST00000510087,ENST00000512724,NR_039994,uc003kje.2_5end | ||
|cluster_id=chr5:87564824..87564880,+ | |||
|description=CAGE_peak_1_at_LOC100505894_5end | |description=CAGE_peak_1_at_LOC100505894_5end | ||
|id=chr5:87564824..87564880,+ | |id=chr5:87564824..87564880,+ | ||
|ontology_enrichment_celltype=CL:0000542!6.60e-13!53;CL:0000051!6.60e-13!53;CL:0000838!1.56e-12!52;CL:0000084!1.31e-07!25;CL:0000827!1.31e-07!25;CL:0000791!1.35e-07!18;CL:0000789!1.35e-07!18;CL:0002420!1.35e-07!18;CL:0002419!1.35e-07!18;CL:0000790!1.35e-07!18 | |ontology_enrichment_celltype=CL:0000542!6.60e-13!53;CL:0000051!6.60e-13!53;CL:0000838!1.56e-12!52;CL:0000084!1.31e-07!25;CL:0000827!1.31e-07!25;CL:0000791!1.35e-07!18;CL:0000789!1.35e-07!18;CL:0002420!1.35e-07!18;CL:0002419!1.35e-07!18;CL:0000790!1.35e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000084;8.88e-08;25!CL:0000542;9.48e-08;53!CL:0000791;1.08e-07;18!CL:0000789;1.08e-07;18!CL:0002419;1.08e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.52e-13,53;CL:0000051,6.52e-13,53;CL:0000838,1.54e-12,52;CL:0000084,1.30e-07,25;CL:0000827,1.30e-07,25;CL:0000791,1.34e-07,18;CL:0000789,1.34e-07,18;CL:0002420,1.34e-07,18;CL:0002419,1.34e-07,18;CL:0000790,1.34e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.34e-08;82!CL:0000051;9.48e-08;53!CL:0000790;1.08e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.05e-08!235;DOID:14566!3.32e-08!239;DOID:305!6.11e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.09e-08,235;DOID:14566,3.43e-08,239;DOID:305,6.38e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.38e-25!115;UBERON:0001049!7.12e-25!57;UBERON:0005068!7.12e-25!57;UBERON:0006241!7.12e-25!57;UBERON:0007135!7.12e-25!57;UBERON:0002780!8.71e-22!41;UBERON:0001890!8.71e-22!41;UBERON:0006240!8.71e-22!41;UBERON:0000955!2.76e-21!69;UBERON:0006238!2.76e-21!69;UBERON:0003080!9.69e-21!42;UBERON:0002616!9.74e-21!59;UBERON:0001017!1.36e-20!82;UBERON:0005743!4.38e-20!86;UBERON:0002020!1.99e-18!34;UBERON:0003528!1.99e-18!34;UBERON:0000073!3.91e-18!94;UBERON:0001016!3.91e-18!94;UBERON:0001893!8.80e-18!34;UBERON:0001869!9.02e-18!32;UBERON:0002791!2.54e-17!33;UBERON:0003075!1.81e-15!86;UBERON:0007284!1.81e-15!86;UBERON:0002346!5.48e-15!90;UBERON:0000153!5.73e-15!129;UBERON:0007811!5.73e-15!129;UBERON:0000956!5.84e-14!25;UBERON:0000203!5.84e-14!25;UBERON:0002619!7.98e-14!22;UBERON:0000033!3.47e-13!123;UBERON:0001950!1.40e-12!20;UBERON:0003056!1.82e-12!61;UBERON:0004121!2.12e-10!169;UBERON:0000924!2.77e-10!173;UBERON:0006601!2.77e-10!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.97e-16;32!UBERON:0003528;4.12e-16;34!UBERON:0002020;4.12e-16;34!UBERON:0002791;5.19e-16;32!UBERON:0002780;6.37e-16;41!UBERON:0001890;6.37e-16;41!UBERON:0001893;2.14e-15;34!UBERON:0000073;2.30e-14;53!UBERON:0002616;2.30e-14;53!UBERON:0000956;5.71e-14;25!UBERON:0000203;5.71e-14;25!UBERON:0002619;7.55e-14;22!UBERON:0001950;1.34e-12;20!UBERON:0000955;4.73e-11;68!UBERON:0001017;3.37e-10;75!UBERON:0001016;3.29e-08;83!UBERON:0007023;1.23e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.53e-26,56;UBERON:0005068,7.53e-26,56;UBERON:0006241,7.53e-26,56;UBERON:0007135,7.53e-26,56;UBERON:0000073,1.27e-24,53;UBERON:0002616,1.27e-24,53;UBERON:0007023,1.30e-24,114;UBERON:0000955,4.85e-22,68;UBERON:0006238,4.85e-22,68;UBERON:0002780,8.51e-22,41;UBERON:0001890,8.51e-22,41;UBERON:0003080,8.51e-22,41;UBERON:0006240,8.51e-22,41;UBERON:0001017,2.99e-21,81;UBERON:0001016,4.42e-19,89;UBERON:0003528,1.95e-18,34;UBERON:0002020,1.95e-18,34;UBERON:0001893,8.64e-18,34;UBERON:0001869,8.85e-18,32;UBERON:0002791,1.90e-17,32;UBERON:0003075,4.34e-15,82;UBERON:0007284,4.34e-15,82;UBERON:0002346,1.35e-14,86;UBERON:0000956,5.75e-14,25;UBERON:0000203,5.75e-14,25;UBERON:0002619,7.87e-14,22;UBERON:0011216,1.79e-13,223;UBERON:0001950,1.38e-12,20;UBERON:0003056,2.50e-12,61;UBERON:0010371,1.91e-11,104;UBERON:0004121,3.27e-10,171;UBERON:0000924,3.27e-10,171;UBERON:0006601,3.27e-10,171;UBERON:0010314,7.83e-07,132 | |||
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| ||
|short_description=p1@LOC100505894 | |short_description=p1@LOC100505894 | ||
}} | }} |
Latest revision as of 02:45, 19 September 2015
Short description: | p1@LOC100505894 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100505894_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000496733, ENST00000501715, ENST00000504636, ENST00000504769, ENST00000506584, ENST00000510087, ENST00000512724, NR_039994, uc003kje.2_5end |
EntrezGene: | LOC100505894 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.52e-13 | 53 |
common lymphoid progenitor | 6.52e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.54e-12 | 52 |
T cell | 1.30e-07 | 25 |
pro-T cell | 1.30e-07 | 25 |
mature alpha-beta T cell | 1.34e-07 | 18 |
alpha-beta T cell | 1.34e-07 | 18 |
immature T cell | 1.34e-07 | 18 |
mature T cell | 1.34e-07 | 18 |
immature alpha-beta T cell | 1.34e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.09e-08 | 235 |
disease of cellular proliferation | 3.43e-08 | 239 |
carcinoma | 6.38e-07 | 106 |