FFCP PHASE1:Hg19::chr5:86708770..86708781,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:86708770..86708781,-
|short_description=p7@CCNH
|description=CAGE_peak_7_at_CCNH_5end
|association_with_transcript=-49bp_to_ENST00000504878,NM_001199189,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=902 | |EntrezGene=902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1594 | |HGNC=1594 | ||
|TSSclassifier=strong | |||
|UniProt=D6RHI7 | |UniProt=D6RHI7 | ||
|association_with_transcript=-49bp_to_ENST00000504878,NM_001199189,uc003kja.2_5end | |||
|cluster_id=chr5:86708770..86708781,- | |||
|description=CAGE_peak_7_at_CCNH_5end | |||
|id=chr5:86708770..86708781,- | |||
|ontology_enrichment_celltype=CL:0000860!4.87e-10!45;CL:0000557!5.28e-10!71;CL:0000839!2.96e-09!70;CL:0002057!3.25e-09!42;CL:0000766!4.97e-09!76;CL:0002009!5.14e-08!65;CL:0000763!5.20e-08!112;CL:0000049!5.20e-08!112;CL:0002194!2.78e-07!63;CL:0000576!2.78e-07!63;CL:0000040!2.78e-07!63;CL:0000559!2.78e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.00e-07;5!CL:0000860;2.65e-07;33!CL:0002057;2.65e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.15e-12,72;CL:0000557,1.55e-12,67;CL:0000738,8.08e-12,136;CL:0002031,3.30e-10,120;CL:0000839,4.16e-10,66;CL:0000037,7.79e-09,168;CL:0002032,8.34e-09,161;CL:0000837,8.34e-09,161;CL:0002009,9.12e-09,61;CL:0000763,2.11e-08,108;CL:0000049,2.11e-08,108;CL:0000988,5.39e-08,177;CL:0002194,6.09e-08,59;CL:0000576,6.09e-08,59;CL:0000040,6.09e-08,59;CL:0000559,6.09e-08,59;CL:0000840,1.03e-07,5;CL:0001029,1.03e-07,5;CL:0002087,3.20e-07,115;CL:0000860,5.15e-07,42;CL:0002057,5.15e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.67e-11!57;UBERON:0005068!2.67e-11!57;UBERON:0006241!2.67e-11!57;UBERON:0007135!2.67e-11!57;UBERON:0005743!5.53e-10!86;UBERON:0003080!7.41e-10!42;UBERON:0001017!1.08e-09!82;UBERON:0002780!1.58e-09!41;UBERON:0001890!1.58e-09!41;UBERON:0006240!1.58e-09!41;UBERON:0001893!7.58e-09!34;UBERON:0000073!7.73e-09!94;UBERON:0001016!7.73e-09!94;UBERON:0002020!8.98e-09!34;UBERON:0003528!8.98e-09!34;UBERON:0002616!1.08e-08!59;UBERON:0002791!1.52e-08!33;UBERON:0000955!1.86e-08!69;UBERON:0006238!1.86e-08!69;UBERON:0002371!3.15e-08!80;UBERON:0001869!3.30e-08!32;UBERON:0007023!2.46e-07!115;UBERON:0000062!4.35e-07!511;UBERON:0001474!5.22e-07!86;UBERON:0002390!7.31e-07!102;UBERON:0003061!7.31e-07!102;UBERON:0003075!7.77e-07!86;UBERON:0007284!7.77e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.93e-10,76;UBERON:0001474,2.63e-09,82;UBERON:0002405,1.67e-08,93;UBERON:0004765,4.86e-08,90;UBERON:0002390,8.28e-08,98;UBERON:0003061,8.28e-08,98;UBERON:0001875,7.47e-07,2;UBERON:0006514,7.47e-07,2;UBERON:0001434,9.29e-07,100 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,0,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0.572471974262113,0.821246550437305,0.753255837568817,0.229240217243854,0.328402357799783,0.157421562627358,1.18009283054671,0.767658796194425,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,0,1.80490002723128,0.868043482863407,0,0,0,0.436194716338694,1.13362783106643,0.242584061187816,0.697287110717054,0,0,0.863077176966451,0.512321413058201,0.709446689665756,2.41321976515633,0.645484683583826,1.35426486594342,0.941211697713023,0.818718450173537,0.898893937780338,4.28517449319264,1.92557416245656,4.47535988059329,0.659702600373432,0.199463657621632,0.852449501065388,2.32167390902867,1.13477044938228,3.11411124497787,0.75374599577023,1.5644487552606,0.65156653411535,0.605399502633369,1.84138817993782,0.949387162322653,0.211255286311942,0.425208599930087,0.209658645508376,0.561643155732475,0,0,0,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0.560508562981536,0,0.393419540227666,0.786021525498329,2.46721798799411,0,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0.664601683750863,0.541607727530031,0.384273959177026,0,0,0,0.289803085735052,0,0.267540828089713,1.04535523804977,0,1.14966148080576,0,0,0,0,0,0,0.255973222308837,0,0,0,1.00803371612366,1.60464117470104,1.01377082717959,0,0.670700859703636,0.383587685530591,0,0,0.579386075843295,0,0,0.567208902984407,0.886917589850256,0.351339142772504,0.72038491523742,0,0,1.29818957461873,1.56716763569341,1.72845348674525,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0.760272105718513,0,0,0,0.17859945656816,0,0,0,0,0,0,3.87780264148325,0,0,0.25326102332916,0.794455084879313,0,0,0,0,0,0.622422070799533,0.269421344139376,0.163461903113459,0,0,0.468642863667593,0,0,0.448346041655403,0.117434498643765,0.323745888736263,0.140450806702248,0,0.122834317311768,0.413303124703062,1.18800285728205,0,0,0,0,0.250237039743928,0,0,0,0.751190294532984,0.226864366320042,0.89694817844431,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.37223371266318,0.506328996723799,0.0974370051611986,0.252433774244115,0.276149695926898,0.161646056818812,0.355009592516614,0.604512589365842,0.508681776931463,0,0,0,0,0.132529768321485,0,0,0,0.72995471815166,0,1.28648187638577,0,0.464367928031979,0,0.709840800239063,0.505754070234305,0.723033089650446,0.661763836394364,0.217879444092406,0.71181185733329,1.34831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0.234004265139238,0.743155811443641,0,0,0,0,0.290633938513962,0.383382679165211,4.92663237895944,0.176096868026452,1.4512968087854,1.29707958075265,0.88369703398466,0.126995788584338,0,0,0,0.308482478109971,0.600686115687835,0.571652865261156,0.224262168690721,0.43596006883328,0.22001485746285,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.434343920002738,0.821905290201534,0.716243852959582,0,1.97030760201927,0.862510299438069,1.15508732651774,0.254094624222463,1.30139853857622,1.54657762555539,0.670065061337395,0.637938751653163,0,0,2.07207756718018,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,0,0.368738337083406,0,0,0,0.413536052245775,0.647142602455851,0.74709290462411,1.21251028578504,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0,0,0,0,0.362578348774867,0,0.184161977871793,0.114814448164607,0.182091168006717,0.655622074797121,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,1.02580050046556,0,0.976135183992909,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0.308097234229289,0.767518373630648,0,0,0.145016693914229,0.340906509664404,0.0890320356467374,0.165284915360978,0,0,0.30347334256665,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0.953150969619124,0,0,0.636406495851874,0,0.899362287916574,0,0.353437207037059,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0,0.578775534266688,0.655894752046633,0.405820753925408,0,0,0.573645408816206,0.392996164052485,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0.962479855263359,0,0,0.28853842595289,0.426851060090485,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0.783399478865116,0,0,0.1605880751037,0.403599414382095,0,0.687010689511529,1.22896305723383,0,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0.439524537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| ||
|short_description=p7@CCNH | |||
}} | }} |
Latest revision as of 02:31, 19 September 2015
Short description: | p7@CCNH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCNH_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000504878, NM_001199189, uc003kja.2_5end |
EntrezGene: | CCNH |
HGNC: | 1594 |
UniProt: | D6RHI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.15e-12 | 72 |
granulocyte monocyte progenitor cell | 1.55e-12 | 67 |
leukocyte | 8.08e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 3.30e-10 | 120 |
myeloid lineage restricted progenitor cell | 4.16e-10 | 66 |
hematopoietic stem cell | 7.79e-09 | 168 |
hematopoietic oligopotent progenitor cell | 8.34e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.34e-09 | 161 |
macrophage dendritic cell progenitor | 9.12e-09 | 61 |
myeloid cell | 2.11e-08 | 108 |
common myeloid progenitor | 2.11e-08 | 108 |
hematopoietic cell | 5.39e-08 | 177 |
monopoietic cell | 6.09e-08 | 59 |
monocyte | 6.09e-08 | 59 |
monoblast | 6.09e-08 | 59 |
promonocyte | 6.09e-08 | 59 |
immature conventional dendritic cell | 1.03e-07 | 5 |
common dendritic progenitor | 1.03e-07 | 5 |
nongranular leukocyte | 3.20e-07 | 115 |
classical monocyte | 5.15e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.15e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.93e-10 | 76 |
bone element | 2.63e-09 | 82 |
immune system | 1.67e-08 | 93 |
skeletal element | 4.86e-08 | 90 |
hematopoietic system | 8.28e-08 | 98 |
blood island | 8.28e-08 | 98 |
globus pallidus | 7.47e-07 | 2 |
pallidum | 7.47e-07 | 2 |
skeletal system | 9.29e-07 | 100 |