FFCP PHASE1:Hg19::chr3:54962100..54962107,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57408 | |EntrezGene=57408 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25023 | |HGNC=25023 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBL6 | |UniProt=Q9HBL6 | ||
|association_with_transcript=0bp_to_ENST00000273286_5end | |association_with_transcript=0bp_to_ENST00000273286_5end | ||
|cluster_id=chr3:54962100..54962107,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_7_at_LRTM1_5end | |description=CAGE_peak_7_at_LRTM1_5end | ||
|id=chr3:54962100..54962107,- | |id=chr3:54962100..54962107,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.13e-57!2;UBERON:0002757!1.13e-57!2;UBERON:0010134!1.13e-57!2;UBERON:0002784!1.13e-57!2;UBERON:0005408!1.13e-57!2;UBERON:0001899!1.13e-57!2;UBERON:0003296!1.78e-29!4;UBERON:0010133!1.78e-29!4;UBERON:0001894!2.46e-17!7;UBERON:0006222!2.46e-17!7;UBERON:0000341!1.54e-15!2;UBERON:0002360!2.37e-15!2;UBERON:0000094!2.37e-15!2;UBERON:0007645!2.37e-15!2;UBERON:0001723!9.90e-11!3;UBERON:0001033!9.90e-11!3;UBERON:0010056!9.90e-11!3 | |ontology_enrichment_uberon=UBERON:0001905!1.13e-57!2;UBERON:0002757!1.13e-57!2;UBERON:0010134!1.13e-57!2;UBERON:0002784!1.13e-57!2;UBERON:0005408!1.13e-57!2;UBERON:0001899!1.13e-57!2;UBERON:0003296!1.78e-29!4;UBERON:0010133!1.78e-29!4;UBERON:0001894!2.46e-17!7;UBERON:0006222!2.46e-17!7;UBERON:0000341!1.54e-15!2;UBERON:0002360!2.37e-15!2;UBERON:0000094!2.37e-15!2;UBERON:0007645!2.37e-15!2;UBERON:0001723!9.90e-11!3;UBERON:0001033!9.90e-11!3;UBERON:0010056!9.90e-11!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0000341;5.69e-21;2!UBERON:0001723;1.83e-14;3!UBERON:0001033;1.83e-14;3!UBERON:0000974;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000341,4.66e-21,2;UBERON:0001723,2.09e-14,3;UBERON:0001033,2.09e-14,3;UBERON:0010056,2.09e-14,3 | |||
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|short_description=p7@LRTM1 | |short_description=p7@LRTM1 | ||
}} | }} |
Latest revision as of 02:27, 19 September 2015
Short description: | p7@LRTM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LRTM1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000273286_5end |
EntrezGene: | LRTM1 |
HGNC: | 25023 |
UniProt: | Q9HBL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
throat | 4.66e-21 | 2 |
tongue | 2.09e-14 | 3 |
gustatory system | 2.09e-14 | 3 |
future tongue | 2.09e-14 | 3 |