FFCP PHASE1:Hg19::chr15:75249573..75249587,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54913 | |EntrezGene=54913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30361 | |HGNC=30361 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BUL9 | |UniProt=Q9BUL9 | ||
|association_with_transcript=187bp_to_NM_017793,uc002azj.1_5end | |association_with_transcript=187bp_to_NM_017793,uc002azj.1_5end | ||
|cluster_id=chr15:75249573..75249587,- | |||
|coexpression_cluster_id=C376 | |||
|description=CAGE_peak_12_at_RPP25_5end | |description=CAGE_peak_12_at_RPP25_5end | ||
|id=chr15:75249573..75249587,- | |id=chr15:75249573..75249587,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.03e-28!57;UBERON:0005068!2.03e-28!57;UBERON:0006241!2.03e-28!57;UBERON:0007135!2.03e-28!57;UBERON:0000955!3.18e-27!69;UBERON:0006238!3.18e-27!69;UBERON:0002616!5.54e-27!59;UBERON:0001017!6.83e-25!82;UBERON:0005743!9.97e-25!86;UBERON:0001893!6.21e-22!34;UBERON:0002020!6.44e-22!34;UBERON:0003528!6.44e-22!34;UBERON:0002780!1.55e-21!41;UBERON:0001890!1.55e-21!41;UBERON:0006240!1.55e-21!41;UBERON:0000073!1.90e-21!94;UBERON:0001016!1.90e-21!94;UBERON:0001869!4.10e-21!32;UBERON:0003080!6.98e-21!42;UBERON:0002619!2.47e-20!22;UBERON:0002791!3.10e-20!33;UBERON:0002346!3.75e-20!90;UBERON:0001950!7.42e-20!20;UBERON:0007023!2.06e-19!115;UBERON:0000956!1.72e-17!25;UBERON:0000203!1.72e-17!25;UBERON:0003075!3.57e-17!86;UBERON:0007284!3.57e-17!86;UBERON:0000033!2.53e-14!123;UBERON:0003056!9.18e-14!61;UBERON:0000153!3.23e-13!129;UBERON:0007811!3.23e-13!129;UBERON:0000924!4.77e-11!173;UBERON:0006601!4.77e-11!173;UBERON:0001871!6.68e-11!7;UBERON:0000200!2.19e-10!6;UBERON:0004121!3.14e-09!169;UBERON:0000025!1.14e-08!194;UBERON:0003076!1.15e-08!15;UBERON:0003057!1.15e-08!15;UBERON:0004733!1.68e-08!12;UBERON:0002028!1.68e-08!12;UBERON:0007277!1.68e-08!12;UBERON:0000988!3.50e-08!3;UBERON:0002771!4.97e-08!3;UBERON:0004732!9.34e-08!13;UBERON:0002298!3.55e-07!8;UBERON:0000477!3.55e-07!286 | |ontology_enrichment_uberon=UBERON:0001049!2.03e-28!57;UBERON:0005068!2.03e-28!57;UBERON:0006241!2.03e-28!57;UBERON:0007135!2.03e-28!57;UBERON:0000955!3.18e-27!69;UBERON:0006238!3.18e-27!69;UBERON:0002616!5.54e-27!59;UBERON:0001017!6.83e-25!82;UBERON:0005743!9.97e-25!86;UBERON:0001893!6.21e-22!34;UBERON:0002020!6.44e-22!34;UBERON:0003528!6.44e-22!34;UBERON:0002780!1.55e-21!41;UBERON:0001890!1.55e-21!41;UBERON:0006240!1.55e-21!41;UBERON:0000073!1.90e-21!94;UBERON:0001016!1.90e-21!94;UBERON:0001869!4.10e-21!32;UBERON:0003080!6.98e-21!42;UBERON:0002619!2.47e-20!22;UBERON:0002791!3.10e-20!33;UBERON:0002346!3.75e-20!90;UBERON:0001950!7.42e-20!20;UBERON:0007023!2.06e-19!115;UBERON:0000956!1.72e-17!25;UBERON:0000203!1.72e-17!25;UBERON:0003075!3.57e-17!86;UBERON:0007284!3.57e-17!86;UBERON:0000033!2.53e-14!123;UBERON:0003056!9.18e-14!61;UBERON:0000153!3.23e-13!129;UBERON:0007811!3.23e-13!129;UBERON:0000924!4.77e-11!173;UBERON:0006601!4.77e-11!173;UBERON:0001871!6.68e-11!7;UBERON:0000200!2.19e-10!6;UBERON:0004121!3.14e-09!169;UBERON:0000025!1.14e-08!194;UBERON:0003076!1.15e-08!15;UBERON:0003057!1.15e-08!15;UBERON:0004733!1.68e-08!12;UBERON:0002028!1.68e-08!12;UBERON:0007277!1.68e-08!12;UBERON:0000988!3.50e-08!3;UBERON:0002771!4.97e-08!3;UBERON:0004732!9.34e-08!13;UBERON:0002298!3.55e-07!8;UBERON:0000477!3.55e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002581;3.10e-50;1!UBERON:0002902;3.10e-50;1!UBERON:0009899;3.10e-50;1!UBERON:0000988;8.69e-18;3!UBERON:0001872;3.10e-11;5!UBERON:0002021;3.10e-11;5!UBERON:0001950;1.69e-10;20!UBERON:0000955;9.95e-10;68!UBERON:0002619;1.12e-09;22!UBERON:0000200;1.38e-09;6!UBERON:0002298;1.38e-09;6!UBERON:0000956;1.11e-08;25!UBERON:0000203;1.11e-08;25!UBERON:0001016;2.77e-07;83!UBERON:0001017;3.83e-07;75!UBERON:0002680;8.14e-07;9!UBERON:0001895;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002581,2.42e-50,1;UBERON:0002902,3.99e-50,1;UBERON:0009899,3.99e-50,1;UBERON:0000988,1.12e-17,3;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0001872,2.94e-11,5;UBERON:0002021,3.26e-11,5;UBERON:0001950,1.69e-10,20;UBERON:0001017,2.17e-10,81;UBERON:0002619,1.12e-09,22;UBERON:0000200,1.32e-09,6;UBERON:0002298,1.57e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0000956,1.11e-08,25;UBERON:0000203,1.11e-08,25;UBERON:0002791,4.74e-07,32;UBERON:0001869,4.74e-07,32;UBERON:0002680,8.85e-07,9;UBERON:0001895,8.85e-07,9;UBERON:0010092,8.85e-07,9 | |||
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| ||
|short_description=p12@RPP25 | |short_description=p12@RPP25 | ||
}} | }} |
Latest revision as of 02:26, 19 September 2015
Short description: | p12@RPP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RPP25_5end |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | 187bp_to_NM_017793, uc002azj.1_5end |
EntrezGene: | RPP25 |
HGNC: | 30361 |
UniProt: | Q9BUL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
postcentral gyrus | 2.42e-50 | 1 |
occipital pole | 3.99e-50 | 1 |
pole of cerebral hemisphere | 3.99e-50 | 1 |
pons | 1.12e-17 | 3 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
parietal lobe | 2.94e-11 | 5 |
occipital lobe | 3.26e-11 | 5 |
neocortex | 1.69e-10 | 20 |
central nervous system | 2.17e-10 | 81 |
regional part of cerebral cortex | 1.12e-09 | 22 |
gyrus | 1.32e-09 | 6 |
brainstem | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
cerebral cortex | 1.11e-08 | 25 |
pallium | 1.11e-08 | 25 |
regional part of telencephalon | 4.74e-07 | 32 |
cerebral hemisphere | 4.74e-07 | 32 |
regional part of metencephalon | 8.85e-07 | 9 |
metencephalon | 8.85e-07 | 9 |
future metencephalon | 8.85e-07 | 9 |