FFCP PHASE1:Hg19::chr12:53601055..53601073,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:53601055..53601073,-
|short_description=p2@ITGB7
|description=CAGE_peak_2_at_ITGB7_5end
|association_with_transcript=0bp_to_ENST00000422257,ENST0000054249...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3695 | |EntrezGene=3695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6162 | |HGNC=6162 | ||
|TSSclassifier=strong | |||
|UniProt=P26010,F5H6T4,F8VNX4 | |UniProt=P26010,F5H6T4,F8VNX4 | ||
|association_with_transcript=0bp_to_ENST00000422257,ENST00000542497,ENST00000552972_5end | |||
|cluster_id=chr12:53601055..53601073,- | |||
|coexpression_cluster_id=C3295 | |||
|description=CAGE_peak_2_at_ITGB7_5end | |||
|id=chr12:53601055..53601073,- | |||
|ontology_enrichment_celltype=CL:0000037!3.09e-75!172;CL:0000566!3.09e-75!172;CL:0002032!2.14e-71!165;CL:0000837!2.14e-71!165;CL:0000988!1.17e-67!182;CL:0000738!1.36e-62!140;CL:0002031!1.10e-55!124;CL:0002087!9.04e-55!119;CL:0000542!5.01e-37!53;CL:0000051!5.01e-37!53;CL:0000838!2.12e-36!52;CL:0000763!9.70e-33!112;CL:0000049!9.70e-33!112;CL:0000766!3.10e-20!76;CL:0000557!3.87e-20!71;CL:0000839!9.33e-19!70;CL:0002009!2.73e-18!65;CL:0000945!5.98e-18!24;CL:0000826!5.98e-18!24;CL:0000084!6.82e-17!25;CL:0000827!6.82e-17!25;CL:0002194!6.88e-17!63;CL:0000576!6.88e-17!63;CL:0000040!6.88e-17!63;CL:0000559!6.88e-17!63;CL:0002057!1.73e-16!42;CL:0000860!3.17e-15!45;CL:0000791!4.21e-15!18;CL:0000789!4.21e-15!18;CL:0002420!4.21e-15!18;CL:0002419!4.21e-15!18;CL:0000790!4.21e-15!18;CL:0000134!2.25e-12!358;CL:0002320!1.29e-11!365;CL:0000625!4.11e-10!11;CL:0000236!6.85e-10!14;CL:0000219!3.80e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.42e-27;53!CL:0000945;2.03e-25;24!CL:0000860;3.95e-22;33!CL:0002057;3.95e-22;33!CL:0002087;4.37e-22;104!CL:0000791;6.18e-21;18!CL:0000789;6.18e-21;18!CL:0002419;6.18e-21;18!CL:0000084;9.60e-21;25!CL:0000473;3.17e-18;39!CL:0000234;3.17e-18;39!CL:0000738;9.17e-17;136!CL:0000576;2.96e-16;48!CL:0000625;9.14e-14;11!CL:0000988;1.15e-12;177!CL:0000236;1.23e-12;13!CL:0000766;3.50e-12;69!CL:0000763;9.46e-12;100!CL:0000624;1.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.56e-88,168;CL:0002032,8.56e-83,161;CL:0000837,8.56e-83,161;CL:0000738,5.81e-82,136;CL:0000988,9.08e-82,177;CL:0002087,8.58e-75,115;CL:0002031,1.16e-71,120;CL:0000542,1.02e-49,53;CL:0000051,1.02e-49,53;CL:0000838,8.16e-49,52;CL:0000763,2.36e-33,108;CL:0000049,2.36e-33,108;CL:0000766,1.92e-25,72;CL:0000945,2.16e-25,24;CL:0000826,2.16e-25,24;CL:0000557,7.11e-25,67;CL:0002009,1.14e-24,61;CL:0000860,6.87e-23,42;CL:0002057,6.87e-23,42;CL:0002194,1.20e-22,59;CL:0000576,1.20e-22,59;CL:0000040,1.20e-22,59;CL:0000559,1.20e-22,59;CL:0000473,1.29e-22,48;CL:0000234,1.29e-22,48;CL:0000839,3.92e-22,66;CL:0000134,1.77e-21,354;CL:0000791,5.67e-21,18;CL:0000789,5.67e-21,18;CL:0002420,5.67e-21,18;CL:0002419,5.67e-21,18;CL:0000790,5.67e-21,18;CL:0000084,1.15e-20,25;CL:0000827,1.15e-20,25;CL:0002320,2.31e-20,361;CL:0000219,1.76e-16,386;CL:0000625,8.15e-14,11;CL:0000236,8.36e-14,14;CL:0000048,6.79e-12,427;CL:0000034,2.62e-11,441;CL:0000723,2.79e-11,433;CL:0000624,1.45e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.42e-27;53!CL:0000790;6.18e-21;18!CL:0002057;8.67e-17;42!CL:0000049;3.03e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!5.96e-16!51;DOID:0060083!5.96e-16!51;DOID:1240!2.36e-12!39;DOID:8692!1.62e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.72e-08;51!DOID:0060083;3.72e-08;51!DOID:0060058;1.28e-07;10!DOID:1240;3.66e-07;39!DOID:8692;6.38e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.67e-14,51;DOID:0060083,8.67e-14,51;DOID:1240,1.98e-09,39;DOID:0060058,1.40e-07,10;DOID:8692,2.07e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.83e-27!102;UBERON:0003061!3.83e-27!102;UBERON:0002193!6.33e-25!112;UBERON:0002371!1.47e-17!80;UBERON:0001474!1.54e-15!86;UBERON:0002405!4.36e-13!115;UBERON:0004765!7.93e-11!101;UBERON:0001434!7.93e-11!101;UBERON:0002384!9.11e-11!375;UBERON:0007023!1.13e-09!115;UBERON:0000178!7.34e-07!15;UBERON:0000179!7.34e-07!15;UBERON:0000463!7.34e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.82e-10;15!UBERON:0000179;6.82e-10;15!UBERON:0000463;6.82e-10;15!UBERON:0002390;4.03e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.20e-37,98;UBERON:0003061,7.20e-37,98;UBERON:0002193,5.33e-34,108;UBERON:0002405,1.74e-25,93;UBERON:0002371,1.21e-22,76;UBERON:0001474,7.36e-20,82;UBERON:0002384,7.55e-19,371;UBERON:0004765,9.18e-17,90;UBERON:0001434,1.19e-13,100;UBERON:0000178,6.87e-10,15;UBERON:0000179,6.87e-10,15;UBERON:0000463,6.87e-10,15;UBERON:0003081,3.77e-08,203;UBERON:0004177,1.09e-07,7;UBERON:0005057,1.09e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.5459202534839,49.917158385567,57.3014487963585,17.3080281813518,15.3531759238885,7.58599004248772,0,0,0,12.7046208951695,9.66750780914466,2.05520307534393,3.87796785972314,8.42286679374595,7.59538047505481,0.895661896959697,1.29557466407592,1.03030227053675,6.68831898385998,2.26725566213286,1.94067248950253,5.81072592264212,1.23350366406548,2.16794459626573,4.31538588483226,2.56160706529101,3.07426898855161,5.5159308917859,3.22742341791913,1.35426486594342,4.70605848856512,2.18324920046277,1.79778787556068,6.42776173978895,3.85114832491312,3.83602275479425,7.58657990429447,2.99195486432448,1.27867425159808,5.22376629531451,1.13477044938228,3.11411124497787,4.52247597462138,4.69334626578181,3.69221035998698,3.63239701580021,4.05105399586321,2.53169909952708,1.05627643155971,0,0.209658645508376,4.6054738770063,2.4028302854641,1.76798145366788,0,0,0,19.3595868907455,14.1996038928154,20.4587128388618,20.9097809057589,17.6174234295845,16.0930683187255,22.4755256746853,7.63243003628291,10.8150464130795,24.6639619535794,14.5263826687587,0,2.24203425192614,2.10707267820062,8.65522988500866,10.2182798314783,15.8313154229622,49.6543891310314,12.3850461320764,16.5706732007157,9.74133642039557,53.1427879342278,10.6058126690941,15.2858387262699,17.331447280961,47.9061535774025,51.1133235910321,49.1669334764992,63.2841540729593,48.1073122320187,13.0492175582613,10.4340922954988,13.589618094647,54.3884844948318,16.4784812248826,20.2740192834752,13.4100436770337,17.5210977878253,13.6727525309848,10.4549724889321,19.7253405991882,20.6058443958614,29.983374372563,21.0731754319175,14.7803039445788,19.9590675792485,20.5928950753301,13.6134939649831,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0,0,0.522389211897802,0.398873881556595,10.2550968451297,11.4398982156026,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,3.7440682422278,3.12125440806329,0,0,0,0,0,0,1.97065295158377,5.19485760678034,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,27.3487751344207,25.2199373058467,27.6003295820182,16.9412807889268,0,0,0,0.837581326671744,0,1.49801404789436,0,1.24324654030811,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,13.0263856457419,11.2171384425681,15.368768323696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0.219259876645935,1.0457418040996,0,0,0,0.9273691048295,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0.329294892959902,0,0,0.288666338176536,0,0,0.470719003883896,0.43050537267123,0,0.443430153536676,0.229723400206959,10.6563997938756,7.64637207142375,15.9501212408766,14.7703700783829,16.865853196534,7.13320642311989,5.40031437238115,13.4831279970026,0,0,0,5.75989842889728,0,0,3.02909918184762,0.997896857164083,2.2980644415884,1.90506224451495,0,3.08876895924805,17.1176009274894,0.156679895773023,2.50634477090067,0.677167111206413,9.79587258132567,2.42159648629257,3.40676990152261,3.77855879231341,2.76516687877612,4.2498460499559,4.0043794010858,2.73543333562856,0,0,3.51592382018778,0.66614393599564,2.81974010175699,0.37428108081644,0.146508179271894,0,73.4411902388582,0,0,0,0,0,0.140669416410513,0,0.824019371133798,0,0.19924798825107,6.07824614168525,0,0,16.8626183481665,0,0,0,5.62729607249559,0.493217028184668,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.538651809526579,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0.627921025580099,8.31058409500782,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,2.06617552674492,0,0,0,0,1.99052386215701,1.94606641907346,1.22206028986725,0,0,0,0.404406797884062,0,0.234264445725339,1.094728735294,0,0,0,1.20990716048664,0,2.0851571277401,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0.34945333648406,0,0.19351266257817,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0.410716136675979,3.83239764200917,0,0.788662062837943,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,67.9080123167591,0,0.272406812223151,0,0,0,22.2724152635985,37.1424938187816,0.182248669974074,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,3.44788587147224,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0.704815022316672,1.6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| ||
|short_description=p2@ITGB7 | |||
}} | }} |
Latest revision as of 02:08, 19 September 2015
Short description: | p2@ITGB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGB7_5end |
Coexpression cluster: | C3295_myeloma_lymphangiectasia_CD4_adult_mycosis_CD8_hereditary |
Association with transcript: | 0bp_to_ENST00000422257, ENST00000542497, ENST00000552972_5end |
EntrezGene: | ITGB7 |
HGNC: | 6162 |
UniProt: | P26010F5H6T4F8VNX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.20e-37 | 98 |
blood island | 7.20e-37 | 98 |
hemolymphoid system | 5.33e-34 | 108 |
immune system | 1.74e-25 | 93 |
bone marrow | 1.21e-22 | 76 |
bone element | 7.36e-20 | 82 |
connective tissue | 7.55e-19 | 371 |
skeletal element | 9.18e-17 | 90 |
skeletal system | 1.19e-13 | 100 |
blood | 6.87e-10 | 15 |
haemolymphatic fluid | 6.87e-10 | 15 |
organism substance | 6.87e-10 | 15 |
lateral plate mesoderm | 3.77e-08 | 203 |
hemopoietic organ | 1.09e-07 | 7 |
immune organ | 1.09e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.67e-14 | 51 |
immune system cancer | 8.67e-14 | 51 |
leukemia | 1.98e-09 | 39 |
lymphoma | 1.40e-07 | 10 |
myeloid leukemia | 2.07e-07 | 31 |