FFCP PHASE1:Hg19::chr4:84255980..84256009,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10855 | |EntrezGene=10855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5164 | |HGNC=5164 | ||
|TSSclassifier=strong | |||
|UniProt=A9JIG7,E9PGR1 | |UniProt=A9JIG7,E9PGR1 | ||
|association_with_transcript=-14bp_to_NM_001199830,uc010ika.2_5end | |association_with_transcript=-14bp_to_NM_001199830,uc010ika.2_5end | ||
|cluster_id=chr4:84255980..84256009,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_1_at_HPSE_5end | |description=CAGE_peak_1_at_HPSE_5end | ||
|id=chr4:84255980..84256009,- | |id=chr4:84255980..84256009,- | ||
|ontology_enrichment_celltype=CL:0002057!7.92e-27!42;CL:0000860!2.39e-26!45;CL:0002194!1.09e-25!63;CL:0000576!1.09e-25!63;CL:0000040!1.09e-25!63;CL:0000559!1.09e-25!63;CL:0002009!1.17e-25!65;CL:0000766!1.58e-24!76;CL:0000557!8.30e-21!71;CL:0000839!9.60e-21!70;CL:0000763!2.24e-15!112;CL:0000049!2.24e-15!112;CL:0002087!1.01e-11!119;CL:0000738!1.06e-10!140;CL:0002031!1.62e-09!124;CL:0000037!1.61e-08!172;CL:0000566!1.61e-08!172;CL:0002032!5.31e-08!165;CL:0000837!5.31e-08!165;CL:0000071!7.80e-08!18;CL:0002546!7.80e-08!18;CL:0002139!1.65e-07!24 | |ontology_enrichment_celltype=CL:0002057!7.92e-27!42;CL:0000860!2.39e-26!45;CL:0002194!1.09e-25!63;CL:0000576!1.09e-25!63;CL:0000040!1.09e-25!63;CL:0000559!1.09e-25!63;CL:0002009!1.17e-25!65;CL:0000766!1.58e-24!76;CL:0000557!8.30e-21!71;CL:0000839!9.60e-21!70;CL:0000763!2.24e-15!112;CL:0000049!2.24e-15!112;CL:0002087!1.01e-11!119;CL:0000738!1.06e-10!140;CL:0002031!1.62e-09!124;CL:0000037!1.61e-08!172;CL:0000566!1.61e-08!172;CL:0002032!5.31e-08!165;CL:0000837!5.31e-08!165;CL:0000071!7.80e-08!18;CL:0002546!7.80e-08!18;CL:0002139!1.65e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-22;33!CL:0002057;3.19e-22;33!CL:0000473;1.76e-21;39!CL:0000234;1.76e-21;39!CL:0000576;9.98e-20;48!CL:0000766;2.26e-14;69!CL:0000071;3.86e-08;18!CL:0000763;7.30e-08;100!CL:0002139;2.77e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.34e-32,48;CL:0000234,3.34e-32,48;CL:0002194,6.15e-29,59;CL:0000576,6.15e-29,59;CL:0000040,6.15e-29,59;CL:0000559,6.15e-29,59;CL:0002009,7.55e-29,61;CL:0000860,1.24e-28,42;CL:0002057,1.24e-28,42;CL:0000766,1.79e-28,72;CL:0000557,2.58e-24,67;CL:0000839,2.88e-24,66;CL:0000763,2.58e-18,108;CL:0000049,2.58e-18,108;CL:0002087,1.88e-13,115;CL:0000738,3.45e-13,136;CL:0002031,2.41e-11,120;CL:0000037,1.10e-10,168;CL:0002032,5.39e-10,161;CL:0000837,5.39e-10,161;CL:0000988,1.75e-08,177;CL:0000071,2.78e-08,18;CL:0002546,2.78e-08,18;CL:0002139,1.69e-07,24;CL:0000115,7.24e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;5.97e-21;42!CL:0002546;3.86e-08;18!CL:0000049;3.85e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.08e-20!102;UBERON:0003061!3.08e-20!102;UBERON:0002193!3.98e-20!112;UBERON:0002371!3.67e-17!80;UBERON:0001474!3.04e-16!86;UBERON:0003081!9.02e-14!216;UBERON:0002405!2.05e-13!115;UBERON:0004765!5.82e-13!101;UBERON:0001434!5.82e-13!101;UBERON:0001986!7.80e-08!18;UBERON:0004638!7.80e-08!18;UBERON:0004852!7.80e-08!18 | |ontology_enrichment_uberon=UBERON:0002390!3.08e-20!102;UBERON:0003061!3.08e-20!102;UBERON:0002193!3.98e-20!112;UBERON:0002371!3.67e-17!80;UBERON:0001474!3.04e-16!86;UBERON:0003081!9.02e-14!216;UBERON:0002405!2.05e-13!115;UBERON:0004765!5.82e-13!101;UBERON:0001434!5.82e-13!101;UBERON:0001986!7.80e-08!18;UBERON:0004638!7.80e-08!18;UBERON:0004852!7.80e-08!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.86e-08;18!UBERON:0001986;3.86e-08;18!UBERON:0004852;3.86e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.29e-23,98;UBERON:0003061,1.29e-23,98;UBERON:0002193,6.29e-23,108;UBERON:0002371,1.44e-19,76;UBERON:0002405,7.29e-19,93;UBERON:0001474,1.20e-18,82;UBERON:0004765,1.08e-17,90;UBERON:0003081,2.21e-17,203;UBERON:0001434,8.09e-14,100;UBERON:0004638,2.78e-08,18;UBERON:0001986,2.78e-08,18;UBERON:0004852,2.78e-08,18;UBERON:0000926,6.28e-07,315;UBERON:0004120,6.28e-07,315;UBERON:0006603,6.28e-07,315;UBERON:0000487,9.03e-07,22 | |||
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| ||
|short_description=p1@HPSE | |short_description=p1@HPSE | ||
}} | }} |
Latest revision as of 02:05, 19 September 2015
Short description: | p1@HPSE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HPSE_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -14bp_to_NM_001199830, uc010ika.2_5end |
EntrezGene: | HPSE |
HGNC: | 5164 |
UniProt: | A9JIG7E9PGR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.34e-32 | 48 |
phagocyte | 3.34e-32 | 48 |
monopoietic cell | 6.15e-29 | 59 |
monocyte | 6.15e-29 | 59 |
monoblast | 6.15e-29 | 59 |
promonocyte | 6.15e-29 | 59 |
macrophage dendritic cell progenitor | 7.55e-29 | 61 |
classical monocyte | 1.24e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-28 | 42 |
myeloid leukocyte | 1.79e-28 | 72 |
granulocyte monocyte progenitor cell | 2.58e-24 | 67 |
myeloid lineage restricted progenitor cell | 2.88e-24 | 66 |
myeloid cell | 2.58e-18 | 108 |
common myeloid progenitor | 2.58e-18 | 108 |
nongranular leukocyte | 1.88e-13 | 115 |
leukocyte | 3.45e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.41e-11 | 120 |
hematopoietic stem cell | 1.10e-10 | 168 |
hematopoietic oligopotent progenitor cell | 5.39e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.39e-10 | 161 |
hematopoietic cell | 1.75e-08 | 177 |
blood vessel endothelial cell | 2.78e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.78e-08 | 18 |
endothelial cell of vascular tree | 1.69e-07 | 24 |
endothelial cell | 7.24e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.29e-23 | 98 |
blood island | 1.29e-23 | 98 |
hemolymphoid system | 6.29e-23 | 108 |
bone marrow | 1.44e-19 | 76 |
immune system | 7.29e-19 | 93 |
bone element | 1.20e-18 | 82 |
skeletal element | 1.08e-17 | 90 |
lateral plate mesoderm | 2.21e-17 | 203 |
skeletal system | 8.09e-14 | 100 |
blood vessel endothelium | 2.78e-08 | 18 |
endothelium | 2.78e-08 | 18 |
cardiovascular system endothelium | 2.78e-08 | 18 |
mesoderm | 6.28e-07 | 315 |
mesoderm-derived structure | 6.28e-07 | 315 |
presumptive mesoderm | 6.28e-07 | 315 |
simple squamous epithelium | 9.03e-07 | 22 |