FFCP PHASE1:Hg19::chr18:23806382..23806424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6875 | |EntrezGene=6875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11538 | |HGNC=11538 | ||
|TSSclassifier=strong | |||
|UniProt=Q92750,F5H0K4 | |UniProt=Q92750,F5H0K4 | ||
|association_with_transcript=0bp_to_ENST00000269142,ENST00000400466,ENST00000418698,NM_005640,uc002kvs.3,uc002kvt.3,uc002kvu.3_5end | |association_with_transcript=0bp_to_ENST00000269142,ENST00000400466,ENST00000418698,NM_005640,uc002kvs.3,uc002kvt.3,uc002kvu.3_5end | ||
|cluster_id=chr18:23806382..23806424,+ | |||
|description=CAGE_peak_1_at_TAF4B_5end | |description=CAGE_peak_1_at_TAF4B_5end | ||
|id=chr18:23806382..23806424,+ | |id=chr18:23806382..23806424,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.34e-19!53;CL:0000051!1.34e-19!53;CL:0000838!1.63e-19!52;CL:0000037!1.64e-15!172;CL:0000566!1.64e-15!172;CL:0000988!1.00e-13!182;CL:0002032!5.41e-13!165;CL:0000837!5.41e-13!165;CL:0000945!9.04e-12!24;CL:0000826!9.04e-12!24;CL:0002087!1.75e-09!119;CL:0002031!1.56e-08!124;CL:0000236!2.27e-08!14;CL:0000084!3.80e-08!25;CL:0000827!3.80e-08!25;CL:0000738!8.46e-08!140;CL:0000791!1.50e-07!18;CL:0000789!1.50e-07!18;CL:0002420!1.50e-07!18;CL:0002419!1.50e-07!18;CL:0000790!1.50e-07!18 | |ontology_enrichment_celltype=CL:0000542!1.34e-19!53;CL:0000051!1.34e-19!53;CL:0000838!1.63e-19!52;CL:0000037!1.64e-15!172;CL:0000566!1.64e-15!172;CL:0000988!1.00e-13!182;CL:0002032!5.41e-13!165;CL:0000837!5.41e-13!165;CL:0000945!9.04e-12!24;CL:0000826!9.04e-12!24;CL:0002087!1.75e-09!119;CL:0002031!1.56e-08!124;CL:0000236!2.27e-08!14;CL:0000084!3.80e-08!25;CL:0000827!3.80e-08!25;CL:0000738!8.46e-08!140;CL:0000791!1.50e-07!18;CL:0000789!1.50e-07!18;CL:0002420!1.50e-07!18;CL:0002419!1.50e-07!18;CL:0000790!1.50e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;5.87e-12;53!CL:0000945;8.63e-12;24!CL:0000236;2.78e-08;13!CL:0000084;2.79e-08;25!CL:0000791;9.80e-08;18!CL:0000789;9.80e-08;18!CL:0002419;9.80e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.13e-19,53;CL:0000051,1.13e-19,53;CL:0000838,1.38e-19,52;CL:0000037,3.16e-15,168;CL:0000988,7.62e-14,177;CL:0002032,1.03e-12,161;CL:0000837,1.03e-12,161;CL:0000945,8.22e-12,24;CL:0000826,8.22e-12,24;CL:0002087,4.72e-09,115;CL:0000236,2.13e-08,14;CL:0000084,3.57e-08,25;CL:0000827,3.57e-08,25;CL:0002031,3.93e-08,120;CL:0000791,1.42e-07,18;CL:0000789,1.42e-07,18;CL:0002420,1.42e-07,18;CL:0002419,1.42e-07,18;CL:0000790,1.42e-07,18;CL:0000738,1.68e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;5.87e-12;53!CL:0000790;9.80e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!6.00e-15!51;DOID:0060083!6.00e-15!51;DOID:1240!1.63e-13!39;DOID:8692!9.70e-12!31;DOID:162!1.03e-09!235;DOID:14566!2.29e-09!239;DOID:0050686!2.70e-08!137 | |ontology_enrichment_disease=DOID:2531!6.00e-15!51;DOID:0060083!6.00e-15!51;DOID:1240!1.63e-13!39;DOID:8692!9.70e-12!31;DOID:162!1.03e-09!235;DOID:14566!2.29e-09!239;DOID:0050686!2.70e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.60e-11;31!DOID:1240;3.88e-11;39!DOID:2531;2.76e-09;51!DOID:0060083;2.76e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.31e-15,51;DOID:0060083,4.31e-15,51;DOID:1240,1.17e-13,39;DOID:8692,7.02e-12,31;DOID:162,5.88e-10,235;DOID:14566,1.24e-09,239;DOID:0050686,2.10e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.25e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!2.25e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.32e-07,114 | |||
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| ||
|short_description=p1@TAF4B | |short_description=p1@TAF4B | ||
}} | }} |
Latest revision as of 01:55, 19 September 2015
Short description: | p1@TAF4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAF4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000269142, ENST00000400466, ENST00000418698, NM_005640, uc002kvs.3, uc002kvt.3, uc002kvu.3_5end |
EntrezGene: | TAF4B |
HGNC: | 11538 |
UniProt: | Q92750F5H0K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.13e-19 | 53 |
common lymphoid progenitor | 1.13e-19 | 53 |
lymphoid lineage restricted progenitor cell | 1.38e-19 | 52 |
hematopoietic stem cell | 3.16e-15 | 168 |
hematopoietic cell | 7.62e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.03e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-12 | 161 |
lymphocyte of B lineage | 8.22e-12 | 24 |
pro-B cell | 8.22e-12 | 24 |
nongranular leukocyte | 4.72e-09 | 115 |
B cell | 2.13e-08 | 14 |
T cell | 3.57e-08 | 25 |
pro-T cell | 3.57e-08 | 25 |
hematopoietic lineage restricted progenitor cell | 3.93e-08 | 120 |
mature alpha-beta T cell | 1.42e-07 | 18 |
alpha-beta T cell | 1.42e-07 | 18 |
immature T cell | 1.42e-07 | 18 |
mature T cell | 1.42e-07 | 18 |
immature alpha-beta T cell | 1.42e-07 | 18 |
leukocyte | 1.68e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.32e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.31e-15 | 51 |
immune system cancer | 4.31e-15 | 51 |
leukemia | 1.17e-13 | 39 |
myeloid leukemia | 7.02e-12 | 31 |
cancer | 5.88e-10 | 235 |
disease of cellular proliferation | 1.24e-09 | 239 |
organ system cancer | 2.10e-08 | 137 |