FFCP PHASE1:Hg19::chr19:48828606..48828637,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2014 | |EntrezGene=2014 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3335 | |HGNC=3335 | ||
|TSSclassifier=strong | |||
|UniProt=P54852 | |UniProt=P54852 | ||
|association_with_transcript=0bp_to_ENST00000270221,NM_001425,uc002piv.2_5end | |association_with_transcript=0bp_to_ENST00000270221,NM_001425,uc002piv.2_5end | ||
|cluster_id=chr19:48828606..48828637,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_EMP3_5end | |description=CAGE_peak_2_at_EMP3_5end | ||
|id=chr19:48828606..48828637,+ | |id=chr19:48828606..48828637,+ | ||
|ontology_enrichment_celltype=CL:0000048!8.78e-51!430;CL:0000723!3.25e-49!436;CL:0000034!4.93e-48!444;CL:0002320!1.84e-43!365;CL:0000134!9.32e-42!358;CL:0000219!1.07e-35!390;CL:0000766!1.55e-33!76;CL:0000557!1.89e-30!71;CL:0000763!2.12e-30!112;CL:0000049!2.12e-30!112;CL:0000738!1.88e-28!140;CL:0002009!2.56e-28!65;CL:0000839!5.29e-28!70;CL:0002057!8.80e-28!42;CL:0002371!2.61e-27!591;CL:0002194!3.25e-27!63;CL:0000576!3.25e-27!63;CL:0000040!3.25e-27!63;CL:0000559!3.25e-27!63;CL:0000037!4.64e-27!172;CL:0000566!4.64e-27!172;CL:0000988!7.01e-26!182;CL:0002032!8.27e-26!165;CL:0000837!8.27e-26!165;CL:0000860!6.21e-25!45;CL:0000144!2.80e-23!625;CL:0002031!1.06e-21!124;CL:0002087!5.64e-21!119;CL:0000055!2.44e-12!180;CL:0000012!9.83e-11!682;CL:0000003!4.67e-10!722;CL:0000548!6.83e-10!679;CL:0000004!6.83e-10!679;CL:0000255!6.83e-10!679;CL:0000680!4.90e-09!57;CL:0000056!4.90e-09!57;CL:0000355!4.90e-09!57;CL:0000192!1.00e-08!42;CL:0000514!1.00e-08!42;CL:0000187!1.73e-08!54;CL:0000183!2.49e-08!59;CL:0000359!3.56e-07!32;CL:0000057!8.27e-07!75 | |ontology_enrichment_celltype=CL:0000048!8.78e-51!430;CL:0000723!3.25e-49!436;CL:0000034!4.93e-48!444;CL:0002320!1.84e-43!365;CL:0000134!9.32e-42!358;CL:0000219!1.07e-35!390;CL:0000766!1.55e-33!76;CL:0000557!1.89e-30!71;CL:0000763!2.12e-30!112;CL:0000049!2.12e-30!112;CL:0000738!1.88e-28!140;CL:0002009!2.56e-28!65;CL:0000839!5.29e-28!70;CL:0002057!8.80e-28!42;CL:0002371!2.61e-27!591;CL:0002194!3.25e-27!63;CL:0000576!3.25e-27!63;CL:0000040!3.25e-27!63;CL:0000559!3.25e-27!63;CL:0000037!4.64e-27!172;CL:0000566!4.64e-27!172;CL:0000988!7.01e-26!182;CL:0002032!8.27e-26!165;CL:0000837!8.27e-26!165;CL:0000860!6.21e-25!45;CL:0000144!2.80e-23!625;CL:0002031!1.06e-21!124;CL:0002087!5.64e-21!119;CL:0000055!2.44e-12!180;CL:0000012!9.83e-11!682;CL:0000003!4.67e-10!722;CL:0000548!6.83e-10!679;CL:0000004!6.83e-10!679;CL:0000255!6.83e-10!679;CL:0000680!4.90e-09!57;CL:0000056!4.90e-09!57;CL:0000355!4.90e-09!57;CL:0000192!1.00e-08!42;CL:0000514!1.00e-08!42;CL:0000187!1.73e-08!54;CL:0000183!2.49e-08!59;CL:0000359!3.56e-07!32;CL:0000057!8.27e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.31e-20;33!CL:0002057;1.31e-20;33!CL:0000473;2.99e-19;39!CL:0000234;2.99e-19;39!CL:0000576;2.71e-18;48!CL:0000766;1.86e-16;69!CL:0000763;1.27e-10;100!CL:0000738;1.09e-07;136!CL:0000219;3.18e-07;193!CL:0000192;3.82e-07;43!CL:0002087;4.32e-07;104!CL:0000359;7.84e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,7.25e-53,427;CL:0000723,2.78e-51,433;CL:0000034,6.28e-50,441;CL:0002320,5.83e-45,361;CL:0000134,3.10e-43,354;CL:0000766,6.14e-37,72;CL:0000219,8.86e-37,386;CL:0000557,8.89e-34,67;CL:0000763,9.49e-33,108;CL:0000049,9.49e-33,108;CL:0002009,1.09e-31,61;CL:0000839,3.73e-31,66;CL:0002194,1.46e-30,59;CL:0000576,1.46e-30,59;CL:0000040,1.46e-30,59;CL:0000559,1.46e-30,59;CL:0000738,1.99e-30,136;CL:0000473,3.21e-30,48;CL:0000234,3.21e-30,48;CL:0000037,1.02e-28,168;CL:0000988,6.98e-28,177;CL:0000860,7.12e-28,42;CL:0002057,7.12e-28,42;CL:0002032,2.12e-27,161;CL:0000837,2.12e-27,161;CL:0002031,2.10e-23,120;CL:0002087,1.10e-22,115;CL:0000680,1.93e-09,58;CL:0000056,1.93e-09,58;CL:0000355,1.93e-09,58;CL:0000192,3.73e-09,43;CL:0000514,3.73e-09,43;CL:0000187,6.91e-09,55;CL:0000359,3.40e-07,32;CL:0000393,8.31e-07,61;CL:0000211,8.31e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.03e-20;42!CL:0000049;1.11e-09;108!CL:0000514;3.82e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.37e-43!375;UBERON:0002204!8.28e-39!167;UBERON:0002371!1.06e-31!80;UBERON:0004765!1.13e-29!101;UBERON:0001434!1.13e-29!101;UBERON:0002390!1.27e-29!102;UBERON:0003061!1.27e-29!102;UBERON:0001474!1.43e-29!86;UBERON:0003081!3.45e-26!216;UBERON:0002193!1.73e-24!112;UBERON:0002405!2.49e-15!115;UBERON:0000914!3.32e-09!83;UBERON:0002329!3.32e-09!83;UBERON:0003077!3.32e-09!83;UBERON:0003059!3.32e-09!83;UBERON:0007282!3.32e-09!83;UBERON:0009618!3.32e-09!83;UBERON:0007285!3.32e-09!83;UBERON:0000926!1.40e-08!448;UBERON:0004120!1.40e-08!448;UBERON:0006603!1.40e-08!448;UBERON:0004290!3.33e-08!70;UBERON:0001134!4.63e-08!61;UBERON:0002036!4.63e-08!61;UBERON:0003082!4.63e-08!61;UBERON:0002385!6.44e-08!63;UBERON:0001015!6.44e-08!63;UBERON:0000383!6.44e-08!63 | |ontology_enrichment_uberon=UBERON:0002384!3.37e-43!375;UBERON:0002204!8.28e-39!167;UBERON:0002371!1.06e-31!80;UBERON:0004765!1.13e-29!101;UBERON:0001434!1.13e-29!101;UBERON:0002390!1.27e-29!102;UBERON:0003061!1.27e-29!102;UBERON:0001474!1.43e-29!86;UBERON:0003081!3.45e-26!216;UBERON:0002193!1.73e-24!112;UBERON:0002405!2.49e-15!115;UBERON:0000914!3.32e-09!83;UBERON:0002329!3.32e-09!83;UBERON:0003077!3.32e-09!83;UBERON:0003059!3.32e-09!83;UBERON:0007282!3.32e-09!83;UBERON:0009618!3.32e-09!83;UBERON:0007285!3.32e-09!83;UBERON:0000926!1.40e-08!448;UBERON:0004120!1.40e-08!448;UBERON:0006603!1.40e-08!448;UBERON:0004290!3.33e-08!70;UBERON:0001134!4.63e-08!61;UBERON:0002036!4.63e-08!61;UBERON:0003082!4.63e-08!61;UBERON:0002385!6.44e-08!63;UBERON:0001015!6.44e-08!63;UBERON:0000383!6.44e-08!63 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@EMP3 | |short_description=p2@EMP3 | ||
}} | }} |
Latest revision as of 01:49, 19 September 2015
Short description: | p2@EMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EMP3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000270221, NM_001425, uc002piv.2_5end |
EntrezGene: | EMP3 |
HGNC: | 3335 |
UniProt: | P54852 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.25e-44 | 371 |
musculoskeletal system | 7.01e-42 | 167 |
bone marrow | 7.94e-35 | 76 |
skeletal system | 2.00e-32 | 100 |
bone element | 2.24e-32 | 82 |
skeletal element | 3.99e-32 | 90 |
hematopoietic system | 4.30e-32 | 98 |
blood island | 4.30e-32 | 98 |
lateral plate mesoderm | 1.75e-29 | 203 |
hemolymphoid system | 2.11e-26 | 108 |
immune system | 5.33e-25 | 93 |
mesoderm | 1.47e-24 | 315 |
mesoderm-derived structure | 1.47e-24 | 315 |
presumptive mesoderm | 1.47e-24 | 315 |
somite | 1.43e-08 | 71 |
presomitic mesoderm | 1.43e-08 | 71 |
presumptive segmental plate | 1.43e-08 | 71 |
dermomyotome | 1.43e-08 | 71 |
trunk paraxial mesoderm | 1.43e-08 | 71 |
skeletal muscle tissue | 1.94e-08 | 62 |
striated muscle tissue | 1.94e-08 | 62 |
myotome | 1.94e-08 | 62 |
dense mesenchyme tissue | 1.99e-08 | 73 |
muscle tissue | 2.74e-08 | 64 |
musculature | 2.74e-08 | 64 |
musculature of body | 2.74e-08 | 64 |
paraxial mesoderm | 3.70e-08 | 72 |
presumptive paraxial mesoderm | 3.70e-08 | 72 |
epithelial vesicle | 6.37e-07 | 78 |