FFCP PHASE1:Hg19::chr19:48753141..48753160,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17057 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2G2,B7Z4A2,G3XAM9 | |||
|association_with_transcript=-37bp_to_ENST00000447740,NM_001184901,NM_001184903,NM_014959,uc002pig.3,uc002pih.3,uc010xzi.1,uc010xzl.1,uc010xzm.1_5end | |||
|cluster_id=chr19:48753141..48753160,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_CARD8_5end | |||
|id=chr19:48753141..48753160,- | |||
|ontology_enrichment_celltype=CL:0000037!1.38e-61!172;CL:0000566!1.38e-61!172;CL:0002032!4.73e-59!165;CL:0000837!4.73e-59!165;CL:0000988!1.56e-55!182;CL:0000738!1.10e-52!140;CL:0002087!5.86e-48!119;CL:0002031!1.45e-44!124;CL:0000763!1.47e-34!112;CL:0000049!1.47e-34!112;CL:0000766!5.20e-29!76;CL:0002057!3.96e-24!42;CL:0000557!9.99e-24!71;CL:0002194!2.45e-23!63;CL:0000576!2.45e-23!63;CL:0000040!2.45e-23!63;CL:0000559!2.45e-23!63;CL:0000839!8.35e-23!70;CL:0002009!1.81e-22!65;CL:0000838!1.42e-21!52;CL:0000542!2.07e-21!53;CL:0000051!2.07e-21!53;CL:0000860!4.36e-21!45;CL:0000791!5.58e-14!18;CL:0000789!5.58e-14!18;CL:0002420!5.58e-14!18;CL:0002419!5.58e-14!18;CL:0000790!5.58e-14!18;CL:0000084!5.44e-13!25;CL:0000827!5.44e-13!25;CL:0002139!9.15e-12!24;CL:0000115!1.55e-09!35;CL:0000625!2.56e-09!11;CL:0000071!3.17e-09!18;CL:0002546!3.17e-09!18;CL:0000134!5.01e-09!358;CL:0000945!3.33e-08!24;CL:0000826!3.33e-08!24;CL:0002320!5.55e-08!365;CL:0000236!8.29e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.49e-23;33!CL:0002057;2.49e-23;33!CL:0000473;6.78e-21;39!CL:0000234;6.78e-21;39!CL:0000576;5.02e-20;48!CL:0000766;3.52e-17;69!CL:0000791;4.38e-17;18!CL:0000789;4.38e-17;18!CL:0002419;4.38e-17;18!CL:0002087;6.35e-17;104!CL:0000763;9.36e-16;100!CL:0000084;3.61e-15;25!CL:0002139;2.75e-14;24!CL:0000738;5.72e-13;136!CL:0000542;4.73e-12;53!CL:0000625;2.90e-11;11!CL:0000988;3.28e-11;177!CL:0000115;4.49e-11;36!CL:0000071;4.73e-11;18!CL:0000094;2.51e-07;8!CL:0000624;4.12e-07;6!CL:0000236;7.65e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.40e-69,168;CL:0002032,6.86e-66,161;CL:0000837,6.86e-66,161;CL:0000988,5.21e-63,177;CL:0000738,2.34e-61,136;CL:0002087,2.22e-56,115;CL:0002031,9.13e-53,120;CL:0000763,7.90e-42,108;CL:0000049,7.90e-42,108;CL:0000766,2.07e-39,72;CL:0002194,3.07e-32,59;CL:0000576,3.07e-32,59;CL:0000040,3.07e-32,59;CL:0000559,3.07e-32,59;CL:0000557,5.71e-32,67;CL:0000839,1.26e-31,66;CL:0000473,1.43e-31,48;CL:0000234,1.43e-31,48;CL:0002009,1.77e-30,61;CL:0000860,8.60e-30,42;CL:0002057,8.60e-30,42;CL:0000838,3.93e-21,52;CL:0000542,2.02e-20,53;CL:0000051,2.02e-20,53;CL:0000791,4.38e-17,18;CL:0000789,4.38e-17,18;CL:0002420,4.38e-17,18;CL:0002419,4.38e-17,18;CL:0000790,4.38e-17,18;CL:0000084,2.77e-15,25;CL:0000827,2.77e-15,25;CL:0002139,2.58e-14,24;CL:0000115,7.33e-13,36;CL:0000134,7.72e-12,354;CL:0000625,2.94e-11,11;CL:0000071,3.84e-11,18;CL:0002546,3.84e-11,18;CL:0002320,7.10e-11,361;CL:0002078,2.19e-08,45;CL:0000219,1.15e-07,386;CL:0000094,2.46e-07,8;CL:0000236,2.46e-07,14;CL:0000624,4.18e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-21;42!CL:0000790;4.38e-17;18!CL:0000049;7.24e-13;108!CL:0000051;4.73e-12;53!CL:0002546;4.73e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!8.39e-10!51;DOID:0060083!8.39e-10!51;DOID:8692!3.06e-09!31;DOID:1240!3.76e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.63e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.66e-08,31;DOID:1240,1.81e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.28e-30!112;UBERON:0002390!4.80e-28!102;UBERON:0003061!4.80e-28!102;UBERON:0002371!3.99e-20!80;UBERON:0002405!4.94e-19!115;UBERON:0001474!1.22e-17!86;UBERON:0003081!1.03e-14!216;UBERON:0004765!1.19e-11!101;UBERON:0001434!1.19e-11!101;UBERON:0007023!7.76e-10!115;UBERON:0001986!3.17e-09!18;UBERON:0004638!3.17e-09!18;UBERON:0004852!3.17e-09!18;UBERON:0002384!3.81e-07!375;UBERON:0000487!4.66e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.73e-11;18!UBERON:0001986;4.73e-11;18!UBERON:0004852;4.73e-11;18!UBERON:0000487;7.56e-09;22!UBERON:0000178;2.48e-07;15!UBERON:0000179;2.48e-07;15!UBERON:0000463;2.48e-07;15!UBERON:0006914;4.20e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.16e-40,108;UBERON:0002390,4.32e-37,98;UBERON:0003061,4.32e-37,98;UBERON:0002405,6.33e-34,93;UBERON:0002371,1.65e-26,76;UBERON:0001474,7.04e-24,82;UBERON:0003081,6.96e-21,203;UBERON:0004765,8.29e-20,90;UBERON:0001434,9.59e-16,100;UBERON:0004638,3.84e-11,18;UBERON:0001986,3.84e-11,18;UBERON:0004852,3.84e-11,18;UBERON:0002384,5.86e-10,371;UBERON:0000487,6.19e-09,22;UBERON:0000178,2.66e-07,15;UBERON:0000179,2.66e-07,15;UBERON:0000463,2.66e-07,15;UBERON:0006914,3.56e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0,0,0,0,0,0,0,2.59805579543034,2.13461532569859,1.81034797021462,7.86728553697808,15.7370053219857,4.18003532953405,0,0,0,0.774672005803016,0.568676929949686,2.64240395401362,2.21598163412751,5.61524452916397,3.90619567288533,2.91090116511902,2.59114932815184,2.83333124397605,25.8808865027625,21.5389287902621,22.3177336292791,16.967319694115,11.5127008646111,10.8397229813286,9.49384894663097,9.47794614157672,9.22280696565482,12.0660988257816,4.51839278508678,10.8341189275473,18.8242339542605,11.4620583024295,16.1800908800461,21.1197885735923,14.7627352455003,19.8194508997703,10.2253903057882,8.7764009353518,4.68847225585964,10.7377418292576,8.5107783703671,9.9651559839292,9.04495194924276,8.34372669472322,11.0766310799609,8.47559303686716,11.0483290796269,12.6584954976354,6.5489138756702,7.01594189884644,3.56419697364239,8.31231870484064,6.15725260650176,6.42902346788321,6.55529310604872,6.56425034756997,3.65328307529268,12.3197371122926,3.82297027883492,5.33705552318133,8.96133467389665,7.60752375368424,10.9202963591352,11.2377628373427,2.86216126360609,5.69212969109448,4.11066032559657,3.44045905312706,2.64342657158052,4.48406850385229,2.10707267820062,14.9499425286513,14.5413982217191,20.3545484009514,34.774791041261,34.5477602631606,28.8803161498187,19.4826728407911,50.0232951414429,32.4066498222321,32.5654825037923,33.3088752430969,22.8002549111702,22.7603858229787,26.8033784503992,27.9113517963707,38.2540073170269,37.0716407905151,25.9514603247022,25.0885257131944,39.2050325733579,47.5193412066382,43.2970581308114,48.832800559764,20.0696211024181,14.9749194386976,22.810849066761,37.1920544122099,39.8038360690241,16.240994451805,22.4938389441816,20.5281999230262,13.5076517960571,15.5115313554434,10.1377082717959,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.851363990735132,0,0,1.29818957461873,1.39303789839414,1.19662164466979,1.43094374583205,1.71598473234038,2.60020250930695,6.16163462836786,4.30117297553062,6.2485290289367,5.6530794192401,7.55098985177831,7.97842321626196,5.22487416342026,8.26933629341852,10.6729878806013,7.36385348082274,5.63961043952806,6.84244895146661,1.95249646038536,10.2945662496843,6.48113558305408,9.64437065468061,7.4094692966636,4.84229366078286,6.13266549863533,3.79706263827252,8.06087673293792,10.5424333948851,15.511210565933,0,0,0,0,0,0.354668382198357,0,0,0,0,0.808264032418128,1.47115712802113,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,3.60916119402685,5.09284063834272,3.42457474022277,0,0,4.92434012174795,1.17002132569619,1.93220510975347,0,0,0,0,0,0,1.47798971368783,1.23267807618516,1.65862492432618,2.01767934783746,1.51490920111656,0,0,0,0,0.616964956219941,0.600686115687835,0,0.112131084345361,0,0.5867062865676,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,3.64871341923571,1.50677127429638,4.21667878966063,0,0,0,0,0,0,3.6988097517864,15.7624608161542,13.8001647910091,12.9626466642546,0,0,0,0,0,10.4860983352606,14.9580729602012,12.8468809165171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7482101159539,11.0014242417495,13.1274896098237,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,6.80374821106063,1.72732732881711,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,1.6068392984416,0,0.308097234229289,0,0.275673144969061,0.107420244868274,0.145016693914229,0.767039646744908,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.404364963146632,0,0.842516912477962,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.7301702225266,0,0,0,0,10.1489521846434,7.64637207142375,9.1143549947866,14.5321383029251,18.9226645619649,7.13320642311989,8.64050299580984,9.51750211553125,0,0,0,0.185803175125719,0.577076851905779,0.853702120180969,0,8.78149234304393,4.78763425330917,31.3276902431347,3.24621940274555,4.49275484981534,2.73881614839831,0.94007937463814,10.0253790836027,5.41733688965131,9.79587258132567,3.8341944366299,3.40676990152261,14.0837191349864,2.45792611446766,2.68411329470899,2.33588798396672,5.86164286206121,0.556812347790485,0,7.30230331885154,0,2.81974010175699,0,3.80921266106924,0,4.1234052182667,0,0,0,0,0,0.140669416410513,0,8.89940920824502,0,0.597743964753209,9.39365312805902,0,0,3.56945935837101,0,0,0,10.2314474045374,2.26879832964947,9.57932369387759,0,0,0.278304294485554,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0,0,0,4.39544717906069,1.16348177330109,0.451191321234361,0.19606253431774,0.503464760927528,1.70778359451767,4.29128763247022,0,0,0,0,1.99052386215701,1.41532103205343,3.66618086960175,0,0,0,0.067401132980677,4.01288823649394,0,1.64209310294099,0,0,0.394584402849391,3.62972148145992,0,0.947798694427319,0,0,0,1.98595173525299,1.2557316736289,0,0,0,0,0,0,1.22308667769421,2.0638323896594,0,0,0,0.872901148395775,0,0,0.274083849293502,0.993573058514948,0.0633107959558787,0,0,2.56143593687223,0,0,0,0,0,12.1767484854124,0,0.135904206073614,0,0,0,1.80126086612937,0.410716136675979,2.55493176133945,0,3.94331031418972,1.95497680890578,2.29160424011684,4.30723814746088,0.199679000498991,0.429226048136571,0.89268582976749,1.5452198671947,0,0,0,0,0,0,0.76205998859206,0.795229689809303,0.681017030557878,0,0,0,0.2249738915515,0,0.182248669974074,0,0.709251365692784,0.577000469484979,25.8720824472546,0,0,2.85878130549347,0.662091970365432,0,0,0,0,1.19730191562487,14.6945612141317,0,0,0.732761168390412,1.32506888912221,0.517131825446202,0.52893040697076,0,0,4.80543356554626,2.67247318669432,2.89967338743037,11.9079845234868,2.96417447846916,0.852548188666271,0,1.08803560673895,1.7548292581589,0.612691153526923,1.63936315354902,0,0,0.610131324509816,0.500763722825999,0,0.443716206147409,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0.955780602982214,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,1.36402216187572,0.531459361253452,0,0,0,0,1.9998739585493,4.05428572837735,0.688859918643263,0,0,0,0.622077260032973,0,0,0,0,0,0,2.60265104943905,0,0,1.1829261750188,0,0,0,0.192687675289379,0,0.638535436228605,0,0,0.276629009856872,0,0,0,0,0,0,0,2.7614397042404,0,0.902523940191087,0,0.781514011233092,0,0.163771917510097,0,0.135075169236789,0,0.413373593002368,0.253663240775627,0,0.548257766857182,0.992422356778588,0.879356221798103,0,1.07140367175657,0.336283722218824,0.606965604236632,0,0.79832133146375,3.68748760178494,0,0.203909198930495,0.131545547125698,0,0.111231401892069,1.02041020705668,0.157115589916002,0,1.82631744101899,0,0,0.571812353413251,0,0.581207126840626,0,0,0,0,0,1.29068207646083,0,0.0852134047591577,0,0,0,0,0,0,0,1.29485767437579,0.410651227424988,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0.926089897295336,0.874238242015829,0,1.22574160876953,0,1.37415926980462,1.18818560130834,0,0,7.51871343838829,6.70362034925203,2.39858774219829,0,0,0,0,2.2936464170227,0.573358332605805,0,0.0679914901909147,0,4.2322147241232,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.606229585745915,0.535928260312357,0.829169439458779,0.827463966895162,2.55880778281177,2.3806443146374,5.36087951638851,6.39369557247336,0.224263725161227,0.763765899337979,1.81905470062397,1.95945073107265,1.36893320434112,8.01489430873592,1.72133292942423,2.66128285236811,0,0,0,0,0,1.95586310692586,0.813792356631477,2.66302709674205,9.25859450518721,2.8851164307291 | |||
|short_description=p3@CARD8 | |||
}} |
Latest revision as of 01:39, 19 September 2015
Short description: | p3@CARD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CARD8_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -37bp_to_ENST00000447740, NM_001184901, NM_001184903, NM_014959, uc002pig.3, uc002pih.3, uc010xzi.1, uc010xzl.1, uc010xzm.1_5end |
EntrezGene: | CARD8 |
HGNC: | 17057 |
UniProt: | Q9Y2G2B7Z4A2G3XAM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.16e-40 | 108 |
hematopoietic system | 4.32e-37 | 98 |
blood island | 4.32e-37 | 98 |
immune system | 6.33e-34 | 93 |
bone marrow | 1.65e-26 | 76 |
bone element | 7.04e-24 | 82 |
lateral plate mesoderm | 6.96e-21 | 203 |
skeletal element | 8.29e-20 | 90 |
skeletal system | 9.59e-16 | 100 |
blood vessel endothelium | 3.84e-11 | 18 |
endothelium | 3.84e-11 | 18 |
cardiovascular system endothelium | 3.84e-11 | 18 |
connective tissue | 5.86e-10 | 371 |
simple squamous epithelium | 6.19e-09 | 22 |
blood | 2.66e-07 | 15 |
haemolymphatic fluid | 2.66e-07 | 15 |
organism substance | 2.66e-07 | 15 |
squamous epithelium | 3.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.66e-08 | 31 |
leukemia | 1.81e-07 | 39 |