FFCP PHASE1:Hg19::chrX:110513684..110513700,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=827 | |EntrezGene=827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1483 | |HGNC=1483 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Q1 | |UniProt=Q9Y6Q1 | ||
|association_with_transcript=50bp_to_ENST00000324068,uc004epc.1_5end | |association_with_transcript=50bp_to_ENST00000324068,uc004epc.1_5end | ||
|cluster_id=chrX:110513684..110513700,- | |||
|coexpression_cluster_id=C2025 | |coexpression_cluster_id=C2025 | ||
|description=CAGE_peak_2_at_CAPN6_5end | |description=CAGE_peak_2_at_CAPN6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!6.51e-09!5;CL:0002541!2.43e-07!3 | |ontology_enrichment_celltype=CL:0002322!6.51e-09!5;CL:0002541!2.43e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.20e-14;3!CL:0000349;4.75e-10;19 | |ontology_enrichment_celltype_v019=CL:0002541;6.20e-14;3!CL:0000349;4.75e-10;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.62e-14,3;CL:0000349,4.82e-10,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.47e-09;2 | |ontology_enrichment_development_v019=UBERON:0007297;1.47e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.72e-15!14;UBERON:0000158!2.72e-15!14;UBERON:0003124!9.67e-11!7;UBERON:0007023!8.87e-09!115;UBERON:0000478!9.87e-08!24;UBERON:0003135!1.04e-07!11;UBERON:0000476!2.43e-07!3;UBERON:0000920!2.43e-07!3;UBERON:0006947!4.40e-07!3;UBERON:0004054!4.40e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!2.72e-15!14;UBERON:0000158!2.72e-15!14;UBERON:0003124!9.67e-11!7;UBERON:0007023!8.87e-09!115;UBERON:0000478!9.87e-08!24;UBERON:0003135!1.04e-07!11;UBERON:0000476!2.43e-07!3;UBERON:0000920!2.43e-07!3;UBERON:0006947!4.40e-07!3;UBERON:0004054!4.40e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.20e-14;3!UBERON:0000920;6.20e-14;3!UBERON:0006947;2.76e-13;3!UBERON:0004054;2.76e-13;3!UBERON:0000922;2.93e-12;49!UBERON:0005631;1.01e-10;10!UBERON:0000158;1.01e-10;10!UBERON:0000478;3.79e-10;24!UBERON:0005904;4.47e-10;4!UBERON:0001987;5.29e-10;4 | |ontology_enrichment_uberon_v019=UBERON:0003124;6.20e-14;3!UBERON:0000920;6.20e-14;3!UBERON:0006947;2.76e-13;3!UBERON:0004054;2.76e-13;3!UBERON:0000922;2.93e-12;49!UBERON:0005631;1.01e-10;10!UBERON:0000158;1.01e-10;10!UBERON:0000478;3.79e-10;24!UBERON:0005904;4.47e-10;4!UBERON:0001987;5.29e-10;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.14e-21,7;UBERON:0005631,2.27e-18,14;UBERON:0000158,2.27e-18,14;UBERON:0000920,6.62e-14,3;UBERON:0006947,2.34e-13,3;UBERON:0004054,2.34e-13,3;UBERON:0000478,3.85e-10,24;UBERON:0005904,3.96e-10,4;UBERON:0001987,4.76e-10,4;UBERON:0004340,4.76e-10,4;UBERON:0004175,2.51e-09,25 | |||
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| ||
|short_description=p2@CAPN6 | |short_description=p2@CAPN6 | ||
}} | }} |
Latest revision as of 01:35, 19 September 2015
Short description: | p2@CAPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAPN6_5end |
Coexpression cluster: | C2025_placenta_skeletal_tongue_trachea_chorionic_epididymis_throat |
Association with transcript: | 50bp_to_ENST00000324068, uc004epc.1_5end |
EntrezGene: | CAPN6 |
HGNC: | 1483 |
UniProt: | Q9Y6Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.62e-14 | 3 |
extraembryonic cell | 4.82e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.14e-21 | 7 |
extraembryonic membrane | 2.27e-18 | 14 |
membranous layer | 2.27e-18 | 14 |
egg chorion | 6.62e-14 | 3 |
male genital duct | 2.34e-13 | 3 |
internal male genitalia | 2.34e-13 | 3 |
extraembryonic structure | 3.85e-10 | 24 |
duct of male reproductive system | 3.96e-10 | 4 |
placenta | 4.76e-10 | 4 |
allantois | 4.76e-10 | 4 |
internal genitalia | 2.51e-09 | 25 |