FFCP PHASE1:Hg19::chr4:83812213..83812221,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:83812213..83812221,- to FFCP PHASE1:Hg19::chr4:83812213..83812221,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22872 | |EntrezGene=22872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17052 | |HGNC=17052 | ||
|TSSclassifier=strong | |||
|UniProt=D6RCQ9 | |UniProt=D6RCQ9 | ||
|association_with_transcript=26bp_to_ENST00000514326_5end | |||
|cluster_id=chr4:83812213..83812221,- | |||
|description=CAGE_peak_7_at_SEC31A_5end | |||
|id=chr4:83812213..83812221,- | |||
|ontology_enrichment_celltype=CL:0002139!6.02e-12!24;CL:0000071!2.96e-08!18;CL:0002546!2.96e-08!18;CL:0000115!1.08e-07!35;CL:0000213!5.85e-07!57;CL:0000215!5.85e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.67e-25;24!CL:0000115;9.23e-18;36!CL:0002138;4.54e-16;6!CL:0000071;1.93e-13;18!CL:0002078;4.80e-11;45!CL:1000413;2.00e-10;9!CL:0000213;2.95e-10;58!CL:0000215;2.95e-10;58!CL:0002144;1.37e-09;3!CL:0002544;8.58e-08;6!CL:0002545;5.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.81e-26,24;CL:0000115,3.10e-20,36;CL:0002078,4.92e-17,45;CL:0005020,5.57e-16,6;CL:0002138,5.57e-16,6;CL:0005022,5.57e-16,6;CL:0000213,4.67e-15,58;CL:0000215,4.67e-15,58;CL:0000071,1.12e-13,18;CL:0002546,1.12e-13,18;CL:0000222,1.11e-11,121;CL:1000413,1.22e-10,9;CL:0002144,1.34e-09,3;CL:0002544,1.26e-07,6;CL:0002545,5.64e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;4.54e-16;6!CL:0002546;1.93e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.26e-12!69;UBERON:0002049!3.92e-11!79;UBERON:0007798!3.92e-11!79;UBERON:0001981!6.11e-10!60;UBERON:0007500!6.11e-10!60;UBERON:0004537!6.11e-10!60;UBERON:0006965!6.11e-10!60;UBERON:0004872!1.52e-09!84;UBERON:0004535!1.52e-08!110;UBERON:0001009!1.80e-08!113;UBERON:0001986!2.96e-08!18;UBERON:0004638!2.96e-08!18;UBERON:0004852!2.96e-08!18;UBERON:0001637!1.53e-07!42;UBERON:0003509!1.53e-07!42;UBERON:0004572!1.53e-07!42;UBERON:0000487!6.53e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.93e-13;18!UBERON:0001986;1.93e-13;18!UBERON:0004852;1.93e-13;18!UBERON:0000487;8.92e-13;22!UBERON:0001473;7.57e-12;8!UBERON:0004536;7.57e-12;8!UBERON:0006558;7.57e-12;8!UBERON:0006914;6.21e-11;25!UBERON:0000055;9.95e-11;65!UBERON:0003915;2.00e-10;9!UBERON:0004700;2.00e-10;9!UBERON:0001917;2.00e-10;9!UBERON:0010523;1.37e-09;3!UBERON:0001915;1.37e-09;3!UBERON:0001982;1.37e-09;3!UBERON:0007500;2.12e-09;56!UBERON:0001981;2.12e-09;56!UBERON:0004537;2.12e-09;56!UBERON:0002465;2.59e-09;10!UBERON:0002049;6.64e-08;75!UBERON:0007798;6.64e-08;75!UBERON:0001637;9.40e-08;42!UBERON:0003509;9.40e-08;42!UBERON:0004572;9.40e-08;42!UBERON:0000490;1.95e-07;33!UBERON:0005800;5.69e-07;2!UBERON:0001515;5.69e-07;2!UBERON:0004573;6.15e-07;33!UBERON:0004571;6.15e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.47e-19,68;UBERON:0002049,4.10e-16,78;UBERON:0007798,4.10e-16,78;UBERON:0004638,1.12e-13,18;UBERON:0001986,1.12e-13,18;UBERON:0004852,1.12e-13,18;UBERON:0000487,4.17e-13,22;UBERON:0001473,8.78e-12,8;UBERON:0004536,8.78e-12,8;UBERON:0006558,8.78e-12,8;UBERON:0007500,1.77e-11,59;UBERON:0001981,1.77e-11,59;UBERON:0004537,1.77e-11,59;UBERON:0006965,1.77e-11,59;UBERON:0006914,3.22e-11,25;UBERON:0003915,1.22e-10,9;UBERON:0004700,1.22e-10,9;UBERON:0001917,1.22e-10,9;UBERON:0004535,1.71e-10,109;UBERON:0001009,4.98e-10,112;UBERON:0010523,1.34e-09,3;UBERON:0001915,1.34e-09,3;UBERON:0001982,1.34e-09,3;UBERON:0002465,2.90e-09,10;UBERON:0001637,4.86e-09,42;UBERON:0003509,4.86e-09,42;UBERON:0004572,4.86e-09,42;UBERON:0004872,1.19e-08,83;UBERON:0004573,2.41e-07,33;UBERON:0004571,2.41e-07,33;UBERON:0005800,5.64e-07,2;UBERON:0001515,5.64e-07,2;UBERON:0003914,7.53e-07,117;UBERON:0005406,7.66e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0.446961094427288,1.74467704820074,0,1.26343974685366,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0,0.305653622991805,0.164201178899891,0.393553906568396,0,0.383829398097213,0,0.919421224478927,0.30120591877825,0.369754010166788,1.00707360754392,0.568676929949686,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0.962787081228281,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0,0.587237189370939,1.14681968437569,0,0.560508562981536,1.05353633910031,0.196709770113833,0,0,0,0.32592226663359,0,0,0.334231370655521,0,0.221533894583621,0,0.512365278902701,0.390178042679635,0,0.276350017785848,0.869409257205157,0.14828656316206,0.535081656179426,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,1.02290049474824,0.722878304769133,0,0,0,1.45990461090791,0.283604451492204,0.221729397462564,0.790513071238134,0.261958150995425,0.364295288292542,0,0.324547393654683,0.174129737299267,0.26591592103773,0.238490624305342,0,0.371457501329565,2.38514888840046,0.860234595106124,1.04142150482278,0.56530794192401,1.67799774483962,0.275118041940067,1.67195973229448,1.55050055501597,1.06729878806013,4.68608857870538,3.62546385398232,2.28081631715554,2.68468263302986,3.30896772311282,2.43042584364528,1.42879565254528,0.44905874525234,0.563057402416611,0,0.949265659568129,0.549605231791222,1.31780417436063,3.87780264148325,0.872188104285069,0,1.01304409331664,1.32409180813219,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.538842688278752,0.490385709340376,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.413303124703062,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.567160915800105,1.25572744982203,0.85422955527427,0.635795703478686,0.600182192168805,0.515262646192195,1.28820270022815,0.37223371266318,0.506328996723799,0.876933046450788,1.26216887122057,0.276149695926898,0.484938170456436,0.355009592516614,0.403008392910561,0.339121184620975,0.57978255948989,0.818238361772504,0.860413786167011,0.121973706129595,0.397589304964456,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0,0,0.474541238222193,0.269662616320329,0.196221465125346,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0.441463099414651,0.860919069801795,0.171567810298526,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,0,0,0.821860859650752,2.16549671641611,2.31492756288305,1.33177906564219,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,1.34385702559088,0.708875486211932,0.626909658919938,0,0,0.492663237895943,0.528290604079356,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,1.03417372606222,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.325736184293735,0.710783897485092,0,0.602878754119172,0.871533458600294,0.399891964728228,1.2162378064119,0,0,0.479249710983165,0,0,1.44781306667579,0.410952645100767,0.895304816199478,0.560425719967636,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.604780586659361,0.744323423456331,1.38115775959256,0.280660094433074,0.128139149255701,1.53512174720011,0.482561763430822,2.96836132889982,0,0.177561725313127,0.574890092096664,0.519254429183621,0.116210378459959,0.362578348774867,0.40101294060657,0.0920809889358963,0.574072240823034,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.316654886678627,0,0.680374821106063,1.72732732881711,0,0.541892875087706,0,0.509752546090077,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,1.03041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.322260734604821,0.290033387828457,0.0852266274161009,0.356128142586949,0.165284915360978,1.15314040419064,0.638063562472921,0.50578890427775,0.929691098594572,2.51849877464512,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.715624433709956,0.744316738719335,0,1.14378116354295,0,0,1.27281299170375,0,0,0,0.117812402345686,0.808729926293264,1.58510321173008,0,0.48763373908959,0.487426979262569,1.05650146756755,0.545999645631943,0.282810863907425,0,0.551365343546124,0,1.75380354101505,0,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|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0.446961094427288,1.74467704820074,0,1.26343974685366,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0,0.305653622991805,0.164201178899891,0.393553906568396,0,0.383829398097213,0,0.919421224478927,0.30120591877825,0.369754010166788,1.00707360754392,0.568676929949686,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0.962787081228281,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0,0.587237189370939,1.14681968437569,0,0.560508562981536,1.05353633910031,0.196709770113833,0,0,0,0.32592226663359,0,0,0.334231370655521,0,0.221533894583621,0,0.512365278902701,0.390178042679635,0,0.276350017785848,0.869409257205157,0.14828656316206,0.535081656179426,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,1.02290049474824,0.722878304769133,0,0,0,1.45990461090791,0.283604451492204,0.221729397462564,0.790513071238134,0.261958150995425,0.364295288292542,0,0.324547393654683,0.174129737299267,0.26591592103773,0.238490624305342,0,0.371457501329565,2.38514888840046,0.860234595106124,1.04142150482278,0.56530794192401,1.67799774483962,0.275118041940067,1.67195973229448,1.55050055501597,1.06729878806013,4.68608857870538,3.62546385398232,2.28081631715554,2.68468263302986,3.30896772311282,2.43042584364528,1.42879565254528,0.44905874525234,0.563057402416611,0,0.949265659568129,0.549605231791222,1.31780417436063,3.87780264148325,0.872188104285069,0,1.01304409331664,1.32409180813219,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.538842688278752,0.490385709340376,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.413303124703062,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.567160915800105,1.25572744982203,0.85422955527427,0.635795703478686,0.600182192168805,0.515262646192195,1.28820270022815,0.37223371266318,0.506328996723799,0.876933046450788,1.26216887122057,0.276149695926898,0.484938170456436,0.355009592516614,0.403008392910561,0.339121184620975,0.57978255948989,0.818238361772504,0.860413786167011,0.121973706129595,0.397589304964456,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0,0,0.474541238222193,0.269662616320329,0.196221465125346,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0.441463099414651,0.860919069801795,0.171567810298526,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,0,0,0.821860859650752,2.16549671641611,2.31492756288305,1.33177906564219,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,1.34385702559088,0.708875486211932,0.626909658919938,0,0,0.492663237895943,0.528290604079356,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,1.03417372606222,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.325736184293735,0.710783897485092,0,0.602878754119172,0.871533458600294,0.399891964728228,1.2162378064119,0,0,0.479249710983165,0,0,1.44781306667579,0.410952645100767,0.895304816199478,0.560425719967636,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.604780586659361,0.744323423456331,1.38115775959256,0.280660094433074,0.128139149255701,1.53512174720011,0.482561763430822,2.96836132889982,0,0.177561725313127,0.574890092096664,0.519254429183621,0.116210378459959,0.362578348774867,0.40101294060657,0.0920809889358963,0.574072240823034,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.316654886678627,0,0.680374821106063,1.72732732881711,0,0.541892875087706,0,0.509752546090077,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,1.03041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.322260734604821,0.290033387828457,0.0852266274161009,0.356128142586949,0.165284915360978,1.15314040419064,0.638063562472921,0.50578890427775,0.929691098594572,2.51849877464512,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.715624433709956,0.744316738719335,0,1.14378116354295,0,0,1.27281299170375,0,0,0,0.117812402345686,0.808729926293264,1.58510321173008,0,0.48763373908959,0.487426979262569,1.05650146756755,0.545999645631943,0.282810863907425,0,0.551365343546124,0,1.75380354101505,0,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| ||
|short_description=p7@SEC31A | |||
}} | }} |
Latest revision as of 01:19, 19 September 2015
Short description: | p7@SEC31A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SEC31A_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000514326_5end |
EntrezGene: | SEC31A |
HGNC: | 17052 |
UniProt: | D6RCQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.81e-26 | 24 |
endothelial cell | 3.10e-20 | 36 |
meso-epithelial cell | 4.92e-17 | 45 |
lymphangioblast | 5.57e-16 | 6 |
endothelial cell of lymphatic vessel | 5.57e-16 | 6 |
vascular lymphangioblast | 5.57e-16 | 6 |
lining cell | 4.67e-15 | 58 |
barrier cell | 4.67e-15 | 58 |
blood vessel endothelial cell | 1.12e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.12e-13 | 18 |
mesodermal cell | 1.11e-11 | 121 |
endothelial cell of artery | 1.22e-10 | 9 |
capillary endothelial cell | 1.34e-09 | 3 |
aortic endothelial cell | 1.26e-07 | 6 |
thoracic aorta endothelial cell | 5.64e-07 | 2 |