FFCP PHASE1:Hg19::chrX:110187812..110187830,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5063 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8592 | |||
|TSSclassifier=strong | |||
|UniProt=B2RCU6,O75914 | |||
|association_with_transcript=299bp_to_ENST00000425146,ENST00000446737,NM_001128166,NM_001128167,uc010npt.1,uc010npu.1_5end | |||
|cluster_id=chrX:110187812..110187830,+ | |||
|coexpression_cluster_id=C1552 | |||
|description=CAGE_peak_9_at_PAK3_5end | |||
|id=chrX:110187812..110187830,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.59e-09!8;CL:0002322!6.78e-08!5;CL:0000540!8.48e-07!6;CL:0000031!8.48e-07!6;CL:0000404!8.48e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.88e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.89e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.36e-12;2!UBERON:0006601;2.82e-07;82!UBERON:0005754;5.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-57!57;UBERON:0005068!1.08e-57!57;UBERON:0006241!1.08e-57!57;UBERON:0007135!1.08e-57!57;UBERON:0001017!1.31e-57!82;UBERON:0005743!2.54e-56!86;UBERON:0000073!1.68e-55!94;UBERON:0001016!1.68e-55!94;UBERON:0003080!5.81e-53!42;UBERON:0002780!3.66e-51!41;UBERON:0001890!3.66e-51!41;UBERON:0006240!3.66e-51!41;UBERON:0002616!2.40e-50!59;UBERON:0007023!7.13e-50!115;UBERON:0000955!7.65e-45!69;UBERON:0006238!7.65e-45!69;UBERON:0002020!2.18e-43!34;UBERON:0003528!2.18e-43!34;UBERON:0001893!2.32e-43!34;UBERON:0003075!4.69e-42!86;UBERON:0007284!4.69e-42!86;UBERON:0002791!1.03e-41!33;UBERON:0001869!6.82e-41!32;UBERON:0000956!2.77e-40!25;UBERON:0000203!2.77e-40!25;UBERON:0002346!1.80e-39!90;UBERON:0003056!1.38e-38!61;UBERON:0004121!9.93e-36!169;UBERON:0002619!1.73e-35!22;UBERON:0000924!1.99e-34!173;UBERON:0006601!1.99e-34!173;UBERON:0000153!6.72e-33!129;UBERON:0007811!6.72e-33!129;UBERON:0001950!3.44e-32!20;UBERON:0000033!6.73e-30!123;UBERON:0000025!2.82e-12!194;UBERON:0004111!6.03e-12!241;UBERON:0000200!1.62e-11!6;UBERON:0001871!7.82e-11!7;UBERON:0002298!2.61e-10!8;UBERON:0000922!4.36e-10!612;UBERON:0002021!5.20e-10!5;UBERON:0001872!9.11e-10!5;UBERON:0000477!1.10e-09!286;UBERON:0000349!3.25e-09!5;UBERON:0001894!4.84e-09!7;UBERON:0006222!4.84e-09!7;UBERON:0000483!6.23e-09!309;UBERON:0000119!1.09e-08!312;UBERON:0000468!2.16e-08!659;UBERON:0000475!1.11e-07!365;UBERON:0003076!1.14e-07!15;UBERON:0003057!1.14e-07!15;UBERON:0002050!5.06e-07!605;UBERON:0005423!5.06e-07!605;UBERON:0006947!5.41e-07!3;UBERON:0004054!5.41e-07!3;UBERON:0003408!5.54e-07!10;UBERON:0001044!5.76e-07!6;UBERON:0003293!5.76e-07!6;UBERON:0003294!5.76e-07!6;UBERON:0010047!5.76e-07!6;UBERON:0000167!5.76e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.95e-63;25!UBERON:0000203;3.95e-63;25!UBERON:0002619;1.36e-56;22!UBERON:0001950;1.10e-54;20!UBERON:0001869;6.90e-49;32!UBERON:0001893;1.30e-43;34!UBERON:0003528;3.89e-43;34!UBERON:0002020;3.89e-43;34!UBERON:0002791;3.96e-42;32!UBERON:0002780;1.87e-34;41!UBERON:0001890;1.87e-34;41!UBERON:0000200;2.35e-31;6!UBERON:0000073;2.75e-27;53!UBERON:0002616;2.75e-27;53!UBERON:0000955;9.03e-19;68!UBERON:0002021;6.10e-18;5!UBERON:0001017;7.53e-18;75!UBERON:0006947;2.63e-17;3!UBERON:0004054;2.63e-17;3!UBERON:0001870;1.43e-16;3!UBERON:0001016;5.10e-16;83!UBERON:0005904;4.10e-13;4!UBERON:0000007;9.37e-13;2!UBERON:0001871;1.42e-12;6!UBERON:0003135;1.42e-12;11!UBERON:0002771;1.25e-11;2!UBERON:0002702;1.25e-11;2!UBERON:0007023;1.86e-10;114!UBERON:0001872;1.87e-10;5!UBERON:0000988;4.88e-08;3!UBERON:0011216;3.32e-07;132!UBERON:0001000;5.10e-07;1!UBERON:0000998;5.10e-07;1!UBERON:0006868;5.10e-07;1!UBERON:0005352;5.10e-07;1!UBERON:0000473;6.53e-07;8!UBERON:0003296;8.87e-07;4!UBERON:0010133;8.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,7.09e-63,25;UBERON:0000203,7.09e-63,25;UBERON:0002619,2.44e-56,22;UBERON:0001950,2.16e-54,20;UBERON:0001869,2.20e-54,32;UBERON:0002780,4.24e-52,41;UBERON:0001890,4.24e-52,41;UBERON:0003080,4.24e-52,41;UBERON:0006240,4.24e-52,41;UBERON:0003528,4.19e-51,34;UBERON:0002020,4.19e-51,34;UBERON:0001893,4.85e-51,34;UBERON:0002791,1.03e-48,32;UBERON:0000073,6.40e-48,53;UBERON:0002616,6.40e-48,53;UBERON:0001049,3.88e-45,56;UBERON:0005068,3.88e-45,56;UBERON:0006241,3.88e-45,56;UBERON:0007135,3.88e-45,56;UBERON:0000955,6.68e-43,68;UBERON:0006238,6.68e-43,68;UBERON:0001017,1.87e-38,81;UBERON:0001016,3.70e-34,89;UBERON:0003056,8.12e-34,61;UBERON:0000200,5.90e-31,6;UBERON:0003075,1.92e-29,82;UBERON:0007284,1.92e-29,82;UBERON:0002346,7.36e-28,86;UBERON:0007023,7.08e-27,114;UBERON:0010371,3.13e-22,104;UBERON:0010314,4.36e-20,132;UBERON:0002021,9.91e-18,5;UBERON:0006947,1.36e-17,3;UBERON:0004054,1.36e-17,3;UBERON:0001870,1.29e-16,3;UBERON:0004121,1.80e-15,171;UBERON:0000924,1.80e-15,171;UBERON:0006601,1.80e-15,171;UBERON:0011216,4.48e-14,223;UBERON:0005904,2.51e-13,4;UBERON:0000007,9.14e-13,2;UBERON:0003135,1.09e-12,11;UBERON:0001871,1.21e-12,6;UBERON:0000025,3.58e-12,192;UBERON:0002771,1.40e-11,2;UBERON:0002702,1.48e-11,2;UBERON:0004111,9.04e-11,240;UBERON:0001872,2.10e-10,5;UBERON:0000988,3.54e-08,3;UBERON:0000998,4.18e-07,1;UBERON:0006868,4.18e-07,1;UBERON:0001000,4.69e-07,1;UBERON:0005352,4.69e-07,1;UBERON:0000473,6.22e-07,8;UBERON:0001301,8.27e-07,1;UBERON:0003296,8.77e-07,4;UBERON:0010133,8.77e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,1.71741592278634,1.23186982565596,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,1.39152147242777,1.99613798001194,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0.658156191461918,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,2.36750641709634,0,2.14250933141343,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,1.64608069485285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.953423842781029,0.321506296930038,0.137539436597234,0,0,0,1.09349201984444,0,0.0788057072991982,0.157363764404994,0,1.6135860539956,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,1.001527445652,0,0.443716206147409,0.745156835296601,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.646948868380091,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.899209151350433,1.41696576325585,1.11743701340006,2.2562800066483,3.02486035466062,0.691572524642179,1.13032951942296,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.2832141077495,3.12431239445539,0.620060389503552,0.887821342714695,1.64092442705466,0.548257766857182,0,0,0,0.535701835878287,0,3.64179362541979,6.82986574053893,0,0,0,1.90315252335129,1.18390992413128,0,0,0.78493092850514,0.471346769748006,0,0,0,0,0.500335809236594,0,0,0,0,0.62164849248911,0.17071847709395,0,0.430227358820278,0,0,2.9637093513365,0.22910686854405,0,0,0,0,0,0,0,0,0,3.74303141539369,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,2.19100916473955,0.917458566809082,0.143339583151451,0,0.815897882290976,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,2.1218035501107,2.41167717140561,0.829169439458779,0.20686599172379,0.639701945702943,0.714193294391221,0.0645889098360061,0.124149428591716,0,4.32800676291521,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p9@PAK3 | |||
}} |
Latest revision as of 01:19, 19 September 2015
Short description: | p9@PAK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PAK3_5end |
Coexpression cluster: | C1552_parietal_pituitary_small_hippocampus_duodenum_temporal_occipital |
Association with transcript: | 299bp_to_ENST00000425146, ENST00000446737, NM_001128166, NM_001128167, uc010npt.1, uc010npu.1_5end |
EntrezGene: | PAK3 |
HGNC: | 8592 |
UniProt: | B2RCU6O75914 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.89e-08 | 3 |