FFCP PHASE1:Hg19::chr4:83719983..83720085,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79966 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21088 | |||
|TSSclassifier=strong | |||
|UniProt=Q86SK9,Q86UC8,Q9BSN4 | |||
|association_with_transcript=0bp_to_ENST00000319540,NM_001037582,NM_024906,uc003hna.2,uc003hnb.3,uc003hnc.2_5end | |||
|cluster_id=chr4:83719983..83720085,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_SCD5_5end | |||
|id=chr4:83719983..83720085,- | |||
|ontology_enrichment_celltype=CL:0000076!2.61e-10!62;CL:0000220!3.38e-10!246;CL:0002321!8.01e-10!248;CL:0002139!2.63e-08!24;CL:0000071!8.52e-07!18;CL:0002546!8.52e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.01e-08;24!CL:0000071;4.64e-07;18!CL:0000115;7.74e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,6.29e-11,63;CL:0002139,6.92e-09,24;CL:0002321,9.90e-09,250;CL:0000115,4.04e-08,36;CL:0000213,1.30e-07,58;CL:0000215,1.30e-07,58;CL:0000071,3.01e-07,18;CL:0002546,3.01e-07,18;CL:0002078,4.77e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.08e-09;82!CL:0002546;4.64e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.37e-34!82;UBERON:0000073!3.87e-34!94;UBERON:0001016!3.87e-34!94;UBERON:0005743!5.56e-34!86;UBERON:0000924!9.81e-33!173;UBERON:0006601!9.81e-33!173;UBERON:0001049!1.47e-32!57;UBERON:0005068!1.47e-32!57;UBERON:0006241!1.47e-32!57;UBERON:0007135!1.47e-32!57;UBERON:0004121!3.66e-32!169;UBERON:0000955!9.32e-32!69;UBERON:0006238!9.32e-32!69;UBERON:0002616!5.04e-30!59;UBERON:0004111!4.73e-29!241;UBERON:0002346!2.65e-28!90;UBERON:0000033!3.25e-28!123;UBERON:0003075!5.36e-28!86;UBERON:0007284!5.36e-28!86;UBERON:0000153!2.52e-27!129;UBERON:0007811!2.52e-27!129;UBERON:0000119!7.30e-27!312;UBERON:0000483!1.07e-26!309;UBERON:0000025!1.54e-25!194;UBERON:0002780!5.30e-25!41;UBERON:0001890!5.30e-25!41;UBERON:0006240!5.30e-25!41;UBERON:0000477!1.65e-24!286;UBERON:0003080!3.39e-24!42;UBERON:0000475!4.33e-24!365;UBERON:0003056!2.46e-21!61;UBERON:0002020!8.32e-21!34;UBERON:0003528!8.32e-21!34;UBERON:0001893!9.81e-21!34;UBERON:0002791!4.12e-20!33;UBERON:0001869!2.26e-19!32;UBERON:0000480!4.18e-18!626;UBERON:0000467!4.88e-18!625;UBERON:0000468!5.70e-18!659;UBERON:0007023!4.24e-17!115;UBERON:0000956!4.08e-15!25;UBERON:0000203!4.08e-15!25;UBERON:0002619!7.36e-15!22;UBERON:0000922!3.26e-14!612;UBERON:0002050!4.64e-14!605;UBERON:0005423!4.64e-14!605;UBERON:0000923!6.87e-14!604;UBERON:0005291!6.87e-14!604;UBERON:0006598!6.87e-14!604;UBERON:0002532!6.87e-14!604;UBERON:0001950!1.19e-13!20;UBERON:0000064!1.26e-12!219;UBERON:0000481!2.30e-11!347;UBERON:0000062!1.20e-09!511;UBERON:0003076!2.05e-09!15;UBERON:0003057!2.05e-09!15;UBERON:0002049!2.95e-08!79;UBERON:0007798!2.95e-08!79;UBERON:0004872!3.20e-08!84;UBERON:0004732!3.70e-08!13;UBERON:0004733!1.46e-07!12;UBERON:0002028!1.46e-07!12;UBERON:0007277!1.46e-07!12;UBERON:0000055!1.54e-07!69;UBERON:0002308!3.51e-07!9;UBERON:0000125!3.51e-07!9;UBERON:0002420!4.94e-07!9;UBERON:0007245!4.94e-07!9;UBERON:0010009!4.94e-07!9;UBERON:0010011!4.94e-07!9;UBERON:0000454!4.94e-07!9;UBERON:0001981!6.70e-07!60;UBERON:0007500!6.70e-07!60;UBERON:0004537!6.70e-07!60;UBERON:0006965!6.70e-07!60;UBERON:0001986!8.52e-07!18;UBERON:0004638!8.52e-07!18;UBERON:0004852!8.52e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.13e-19;41!UBERON:0001890;1.13e-19;41!UBERON:0000073;1.39e-19;53!UBERON:0002616;1.39e-19;53!UBERON:0001893;2.69e-19;34!UBERON:0003528;2.78e-19;34!UBERON:0002020;2.78e-19;34!UBERON:0002791;4.31e-19;32!UBERON:0001869;4.83e-19;32!UBERON:0000956;2.44e-16;25!UBERON:0000203;2.44e-16;25!UBERON:0002619;4.58e-16;22!UBERON:0000955;1.22e-15;68!UBERON:0001017;1.94e-15;75!UBERON:0001950;9.58e-15;20!UBERON:0001016;1.24e-14;83!UBERON:0004732;8.17e-09;13!UBERON:0004733;3.66e-08;12!UBERON:0002028;3.66e-08;12!UBERON:0000125;1.04e-07;9!UBERON:0002308;1.04e-07;9!UBERON:0002420;1.51e-07;9!UBERON:0007245;1.51e-07;9!UBERON:0010009;1.51e-07;9!UBERON:0010011;1.51e-07;9!UBERON:0000454;1.51e-07;9!UBERON:0004638;4.64e-07;18!UBERON:0001986;4.64e-07;18!UBERON:0004852;4.64e-07;18 | |||
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| |||
|short_description=p2@SCD5 | |||
}} |
Latest revision as of 01:15, 19 September 2015
Short description: | p2@SCD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCD5_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000319540, NM_001037582, NM_024906, uc003hna.2, uc003hnb.3, uc003hnc.2_5end |
EntrezGene: | SCD5 |
HGNC: | 21088 |
UniProt: | Q86SK9Q86UC8Q9BSN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 6.29e-11 | 63 |
endothelial cell of vascular tree | 6.92e-09 | 24 |
embryonic cell | 9.90e-09 | 250 |
endothelial cell | 4.04e-08 | 36 |
lining cell | 1.30e-07 | 58 |
barrier cell | 1.30e-07 | 58 |
blood vessel endothelial cell | 3.01e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.01e-07 | 18 |
meso-epithelial cell | 4.77e-07 | 45 |