FFCP PHASE1:Hg19::chr19:48497983..48498002,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64100 | |EntrezGene=64100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14417 | |HGNC=14417 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_uc002pht.2_5end | |association_with_transcript=52bp_to_uc002pht.2_5end | ||
|cluster_id=chr19:48497983..48498002,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_3_at_ELSPBP1_5end | |description=CAGE_peak_3_at_ELSPBP1_5end | ||
|id=chr19:48497983..48498002,+ | |id=chr19:48497983..48498002,+ | ||
|ontology_enrichment_celltype=CL:0002566!8.64e-13!1;CL:0000243!7.54e-07!15;CL:0000125!7.54e-07!15;CL:0000030!7.54e-07!15;CL:0000339!7.54e-07!15;CL:0000333!9.24e-07!41 | |ontology_enrichment_celltype=CL:0002566!8.64e-13!1;CL:0000243!7.54e-07!15;CL:0000125!7.54e-07!15;CL:0000030!7.54e-07!15;CL:0000339!7.54e-07!15;CL:0000333!9.24e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000128;2.03e-08;7!CL:0000126;2.03e-08;7!CL:0000127;2.03e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.03e-08,7;CL:0000126,2.03e-08,7;CL:0000127,2.03e-08,7;CL:0002453,2.03e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.32e-26;2 | |||
|ontology_enrichment_disease=DOID:3093!1.69e-09!11 | |ontology_enrichment_disease=DOID:3093!1.69e-09!11 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!4.17e-17!3;UBERON:0004054!4.17e-17!3;UBERON:0001301!1.61e-13!1;UBERON:0001000!2.06e-13!1;UBERON:0005352!2.06e-13!1;UBERON:0005904!4.50e-13!4;UBERON:0003135!1.83e-10!11;UBERON:0003101!6.35e-09!22;UBERON:0000079!6.35e-09!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.40e-66;3!UBERON:0004054;2.40e-66;3!UBERON:0001301;1.46e-50;1!UBERON:0001000;3.99e-50;1!UBERON:0005352;3.99e-50;1!UBERON:0005904;4.00e-50;4!UBERON:0003135;5.35e-41;11!UBERON:0003101;4.58e-21;22!UBERON:0000079;4.58e-21;22!UBERON:0000058;7.73e-21;10!UBERON:0004175;1.61e-10;21!UBERON:0003133;4.17e-08;44!UBERON:0000473;1.80e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.40e-66,3;UBERON:0004054,2.40e-66,3;UBERON:0001301,1.46e-50,1;UBERON:0001000,3.99e-50,1;UBERON:0005352,3.99e-50,1;UBERON:0005904,4.00e-50,4;UBERON:0003135,5.35e-41,11;UBERON:0003101,4.58e-21,22;UBERON:0000079,4.58e-21,22;UBERON:0000058,1.63e-11,19;UBERON:0003133,3.53e-10,48;UBERON:0004175,5.27e-09,25;UBERON:0005156,1.93e-08,59;UBERON:0000990,1.93e-08,59;UBERON:0005103,1.49e-07,8;UBERON:0000083,1.49e-07,8;UBERON:0009201,1.49e-07,8;UBERON:0006553,1.49e-07,8;UBERON:0003074,1.49e-07,8;UBERON:0003060,1.49e-07,8;UBERON:0000473,1.80e-07,8;UBERON:0000080,7.48e-07,9;UBERON:0002120,7.48e-07,9;UBERON:0004875,7.48e-07,9;UBERON:0005721,7.48e-07,9;UBERON:0005754,7.48e-07,9;UBERON:0007297,7.48e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21570280760989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3404284313433,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,74.2588340028628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57647573942014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21570280760989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3404284313433,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,74.2588340028628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57647573942014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ELSPBP1 | |short_description=p3@ELSPBP1 | ||
}} | }} |
Latest revision as of 01:14, 19 September 2015
Short description: | p3@ELSPBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ELSPBP1_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 52bp_to_uc002pht.2_5end |
EntrezGene: | ELSPBP1 |
HGNC: | 14417 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.03e-08 | 7 |
macroglial cell | 2.03e-08 | 7 |
astrocyte | 2.03e-08 | 7 |
oligodendrocyte precursor cell | 2.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.40e-66 | 3 |
internal male genitalia | 2.40e-66 | 3 |
epididymis | 1.46e-50 | 1 |
vas deferens | 3.99e-50 | 1 |
spermatic cord | 3.99e-50 | 1 |
duct of male reproductive system | 4.00e-50 | 4 |
male reproductive organ | 5.35e-41 | 11 |
male organism | 4.58e-21 | 22 |
male reproductive system | 4.58e-21 | 22 |
duct | 1.63e-11 | 19 |
reproductive organ | 3.53e-10 | 48 |
internal genitalia | 5.27e-09 | 25 |
reproductive structure | 1.93e-08 | 59 |
reproductive system | 1.93e-08 | 59 |
mesonephric epithelium | 1.49e-07 | 8 |
mesonephric tubule | 1.49e-07 | 8 |
nephric duct | 1.49e-07 | 8 |
renal duct | 1.49e-07 | 8 |
mesonephric duct | 1.49e-07 | 8 |
pronephric duct | 1.49e-07 | 8 |
testis | 1.80e-07 | 8 |
mesonephros | 7.48e-07 | 9 |
pronephros | 7.48e-07 | 9 |
nephrogenic cord | 7.48e-07 | 9 |
pronephric mesoderm | 7.48e-07 | 9 |
rostral part of nephrogenic cord | 7.48e-07 | 9 |
presumptive pronephric mesoderm | 7.48e-07 | 9 |