FFCP PHASE1:Hg19::chr2:97171087..97171100,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93082 | |EntrezGene=93082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=25162 | |HGNC=25162 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010fhx.2,uc010yuo.1,uc010yup.1_5end | |association_with_transcript=0bp_to_uc010fhx.2,uc010yuo.1,uc010yup.1_5end | ||
|cluster_id=chr2:97171087..97171100,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_NEURL3_5end | |description=CAGE_peak_1_at_NEURL3_5end | ||
|id=chr2:97171087..97171100,- | |id=chr2:97171087..97171100,- | ||
|ontology_enrichment_celltype=CL:0002057!3.19e-19!42;CL:0002009!7.47e-18!65;CL:0000557!2.14e-17!71;CL:0000860!4.28e-17!45;CL:0002194!1.84e-16!63;CL:0000576!1.84e-16!63;CL:0000040!1.84e-16!63;CL:0000559!1.84e-16!63;CL:0000766!8.92e-16!76;CL:0000839!1.32e-15!70;CL:0000738!7.41e-09!140;CL:0000763!9.51e-09!112;CL:0000049!9.51e-09!112;CL:0002031!2.20e-08!124;CL:0002087!7.73e-08!119 | |ontology_enrichment_celltype=CL:0002057!3.19e-19!42;CL:0002009!7.47e-18!65;CL:0000557!2.14e-17!71;CL:0000860!4.28e-17!45;CL:0002194!1.84e-16!63;CL:0000576!1.84e-16!63;CL:0000040!1.84e-16!63;CL:0000559!1.84e-16!63;CL:0000766!8.92e-16!76;CL:0000839!1.32e-15!70;CL:0000738!7.41e-09!140;CL:0000763!9.51e-09!112;CL:0000049!9.51e-09!112;CL:0002031!2.20e-08!124;CL:0002087!7.73e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.61e-39;33!CL:0002057;8.61e-39;33!CL:0000473;6.15e-33;39!CL:0000234;6.15e-33;39!CL:0000576;1.59e-21;48!CL:0000766;6.86e-15;69!CL:1000507;5.83e-10;10!CL:1000494;5.83e-10;10!CL:1000497;3.92e-09;17!CL:0002518;3.92e-09;17!CL:0002087;5.92e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.19e-42,48;CL:0000234,1.19e-42,48;CL:0000860,9.50e-41,42;CL:0002057,9.50e-41,42;CL:0002009,3.89e-35,61;CL:0002194,4.02e-32,59;CL:0000576,4.02e-32,59;CL:0000040,4.02e-32,59;CL:0000559,4.02e-32,59;CL:0000557,4.09e-31,67;CL:0000839,9.66e-28,66;CL:0000766,2.60e-26,72;CL:0002031,1.00e-18,120;CL:0002087,1.47e-17,115;CL:0000763,9.66e-17,108;CL:0000049,9.66e-17,108;CL:0000738,3.09e-16,136;CL:0002032,4.49e-12,161;CL:0000837,4.49e-12,161;CL:0000037,3.82e-11,168;CL:0000988,7.71e-11,177;CL:1000507,6.15e-10,10;CL:1000494,6.15e-10,10;CL:1000497,4.06e-09,17;CL:0002518,4.06e-09,17 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-29;42!UBERON:0003918;4.34e-08;10!UBERON:0007687;4.34e-08;10 | |||
|ontology_enrichment_disease=DOID:305!3.05e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.31e-17!115;UBERON:0002371!1.08e-13!80;UBERON:0002193!5.66e-13!112;UBERON:0001474!1.84e-12!86;UBERON:0002390!5.82e-12!102;UBERON:0003061!5.82e-12!102;UBERON:0004765!6.07e-11!101;UBERON:0001434!6.07e-11!101;UBERON:0005172!4.73e-09!55;UBERON:0005173!4.73e-09!55;UBERON:0000489!1.11e-08!32;UBERON:0002113!3.32e-08!27;UBERON:0003918!3.32e-08!27;UBERON:0005095!3.32e-08!27;UBERON:0007687!3.32e-08!27;UBERON:0000058!4.82e-08!26;UBERON:0005177!6.43e-08!107;UBERON:0006554!6.45e-08!44;UBERON:0001008!1.43e-07!45;UBERON:0002417!2.99e-07!61;UBERON:0000916!2.99e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;5.16e-11;24!UBERON:0011143;5.16e-11;24!UBERON:0004211;5.83e-10;10!UBERON:0009773;5.83e-10;10!UBERON:0001231;5.83e-10;10!UBERON:0004810;5.83e-10;10!UBERON:0000489;1.25e-08;29!UBERON:0006554;2.98e-08;30!UBERON:0001008;2.98e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,9.15e-28,93;UBERON:0002371,2.83e-26,76;UBERON:0001474,1.22e-23,82;UBERON:0002193,2.30e-22,108;UBERON:0002390,5.74e-21,98;UBERON:0003061,5.74e-21,98;UBERON:0004765,1.10e-20,90;UBERON:0001434,1.15e-17,100;UBERON:0002113,7.57e-12,26;UBERON:0003918,7.57e-12,26;UBERON:0011143,7.57e-12,26;UBERON:0005095,7.57e-12,26;UBERON:0007687,7.57e-12,26;UBERON:0004810,6.15e-10,10;UBERON:0000489,1.99e-09,31;UBERON:0003081,9.71e-09,203;UBERON:0005172,1.14e-08,54;UBERON:0005173,1.14e-08,54;UBERON:0002204,1.08e-07,167;UBERON:0002417,2.23e-07,60;UBERON:0000916,2.23e-07,60 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66121775062503,3.36612416744778,3.54198515911557,1.18009283054671,0.767658796194425,0.154816123316076,0,0,0,0,0,0,13.8498852132969,6.01633342410425,4.12320654360118,0,0,0,0.145398238779565,0,0,1.85943229524548,3.70051099219643,4.64559556342655,54.3738621488864,65.5771408714498,73.54597349535,24.8216890130365,26.4648720269369,17.6054432572644,0.564727018627814,1.09162460023138,1.12361742222542,29.3840536676066,32.4138317346855,33.2455305415501,3.62836430205388,5.78444607102732,1.70489900213078,27.5698776697155,16.4541715160431,16.8162007228805,23.1148772036204,34.9393555341535,49.7362454374717,37.5347691632689,33.1449872388808,37.9754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0.324547393654683,0,0.930705723632056,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,1.61131726843659,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,1.8448265781467,0,0,0,0,0,0.325808305310325,0,0,0,0,17.7570730746121,35.649884468399,9.70296176396451,0.790204397959275,0,0.738651018262192,0.234004265139238,0.148631162288728,0.93733833986777,0.671928512795438,0.850650583454319,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,17.0273292897667,2.51128545716063,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,1.00253235151642,0,0,0,0,1.35359883872224,2.69553679865452,0,5.84556898613043,3.37765212457202,0,0,0,0,0.812839312631559,5.01689773854853,2.29388645740534,6.64860807142979,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,2.46426864140871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.847294206991012,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0,0,0.398495976502139,0.276283915531148,1.51159648712566,0,15.0163462662505,0,0.539210106883961,0.537063524026827,0,0.394573622547734,0,0,0,0,0,0,0,0,0.796554137998498,0.254253650292766,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0.91153644677601,0.23056390438806,0.897576444097721,0.869178975376065,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,26.7967541950594,3.91758739581955,2.54435528581093,0.216388639742091,0,0.176915129006678,1.83309043480088,0.296521128680622,0,0,0.134802265961354,0,0,0,0.391329237864179,0.242780379534093,1.57833761139756,0,0,0,10.8232861978435,0.103688191397247,0,0.330991955875499,0,0,1.70765727617876,0,0,0,0.0870592065804026,0.34945333648406,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0,0,1.17330829640882,0.160317640503067,0,0.19980960958213,0.72045208577053,0,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,2.32991899054908,0.315132729228895,0,0.26961417541674,0.196854963029498,0.169346664131569,0,0.136203406111576,0,0,0,7.19916452964801,1.5476039091159,0,0,4.2555081941567,6.03227763552478,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0.439656701034247,3.97520666736664,0.129282956361551,0,0.342173675768659,0,2.0289608387862,0.314408610199332,0,0,0,0,1.91502377331055,0.544017803369474,0.2506898940227,1.22538230705385,0,0.157054096250234,0,0,0,0,0,0.496771223531068,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,1.92619830407303,0,0,0,0,0.244736704506468,0.358177682162975,0.617602894321944,0,0.176689145945881,0.964570191354574,0.675769762612291,1.79369063011563,0.690860683462397,0,0,0.779441235357554,0,0.163565394255844,0,1.96618327002975,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0.690359926060101,0,0,0,17.193308247128,0.523813388962845,0,2.51355346568977,0,0.781078098613847,0,0.0634158101939068,0,2.19303106742873,0,0,7.53798323073612,0,0.336283722218824,0,0,0.0887023701626388,1.38280785066935,0,0.135939465953663,0,0.118193840883968,0.222462803784138,0.863424021355654,0,2.5224494698241,0,6.0459725541214,21.9765776428043,0,0,0.116241425368125,0,0,0,0,0,8.60454717640555,0.118332000730565,0.0852134047591577,7.62096690343672,3.2074961596167,0,0,0.894843454382338,0,0.243835849964539,0,0.410651227424988,0,0,0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| |phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66121775062503,3.36612416744778,3.54198515911557,1.18009283054671,0.767658796194425,0.154816123316076,0,0,0,0,0,0,13.8498852132969,6.01633342410425,4.12320654360118,0,0,0,0.145398238779565,0,0,1.85943229524548,3.70051099219643,4.64559556342655,54.3738621488864,65.5771408714498,73.54597349535,24.8216890130365,26.4648720269369,17.6054432572644,0.564727018627814,1.09162460023138,1.12361742222542,29.3840536676066,32.4138317346855,33.2455305415501,3.62836430205388,5.78444607102732,1.70489900213078,27.5698776697155,16.4541715160431,16.8162007228805,23.1148772036204,34.9393555341535,49.7362454374717,37.5347691632689,33.1449872388808,37.9754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0.324547393654683,0,0.930705723632056,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,1.61131726843659,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,1.8448265781467,0,0,0,0,0,0.325808305310325,0,0,0,0,17.7570730746121,35.649884468399,9.70296176396451,0.790204397959275,0,0.738651018262192,0.234004265139238,0.148631162288728,0.93733833986777,0.671928512795438,0.850650583454319,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,17.0273292897667,2.51128545716063,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,1.00253235151642,0,0,0,0,1.35359883872224,2.69553679865452,0,5.84556898613043,3.37765212457202,0,0,0,0,0.812839312631559,5.01689773854853,2.29388645740534,6.64860807142979,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,2.46426864140871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.847294206991012,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0,0,0.398495976502139,0.276283915531148,1.51159648712566,0,15.0163462662505,0,0.539210106883961,0.537063524026827,0,0.394573622547734,0,0,0,0,0,0,0,0,0.796554137998498,0.254253650292766,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0.91153644677601,0.23056390438806,0.897576444097721,0.869178975376065,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,26.7967541950594,3.91758739581955,2.54435528581093,0.216388639742091,0,0.176915129006678,1.83309043480088,0.296521128680622,0,0,0.134802265961354,0,0,0,0.391329237864179,0.242780379534093,1.57833761139756,0,0,0,10.8232861978435,0.103688191397247,0,0.330991955875499,0,0,1.70765727617876,0,0,0,0.0870592065804026,0.34945333648406,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0,0,1.17330829640882,0.160317640503067,0,0.19980960958213,0.72045208577053,0,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,2.32991899054908,0.315132729228895,0,0.26961417541674,0.196854963029498,0.169346664131569,0,0.136203406111576,0,0,0,7.19916452964801,1.5476039091159,0,0,4.2555081941567,6.03227763552478,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0.439656701034247,3.97520666736664,0.129282956361551,0,0.342173675768659,0,2.0289608387862,0.314408610199332,0,0,0,0,1.91502377331055,0.544017803369474,0.2506898940227,1.22538230705385,0,0.157054096250234,0,0,0,0,0,0.496771223531068,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,1.92619830407303,0,0,0,0,0.244736704506468,0.358177682162975,0.617602894321944,0,0.176689145945881,0.964570191354574,0.675769762612291,1.79369063011563,0.690860683462397,0,0,0.779441235357554,0,0.163565394255844,0,1.96618327002975,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0.690359926060101,0,0,0,17.193308247128,0.523813388962845,0,2.51355346568977,0,0.781078098613847,0,0.0634158101939068,0,2.19303106742873,0,0,7.53798323073612,0,0.336283722218824,0,0,0.0887023701626388,1.38280785066935,0,0.135939465953663,0,0.118193840883968,0.222462803784138,0.863424021355654,0,2.5224494698241,0,6.0459725541214,21.9765776428043,0,0,0.116241425368125,0,0,0,0,0,8.60454717640555,0.118332000730565,0.0852134047591577,7.62096690343672,3.2074961596167,0,0,0.894843454382338,0,0.243835849964539,0,0.410651227424988,0,0,0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| ||
|short_description=p1@NEURL3 | |short_description=p1@NEURL3 | ||
}} | }} |
Latest revision as of 01:13, 19 September 2015
Short description: | p1@NEURL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEURL3_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_uc010fhx.2, uc010yuo.1, uc010yup.1_5end |
EntrezGene: | NEURL3 |
HGNC: | 25162 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.19e-42 | 48 |
phagocyte | 1.19e-42 | 48 |
classical monocyte | 9.50e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.50e-41 | 42 |
macrophage dendritic cell progenitor | 3.89e-35 | 61 |
monopoietic cell | 4.02e-32 | 59 |
monocyte | 4.02e-32 | 59 |
monoblast | 4.02e-32 | 59 |
promonocyte | 4.02e-32 | 59 |
granulocyte monocyte progenitor cell | 4.09e-31 | 67 |
myeloid lineage restricted progenitor cell | 9.66e-28 | 66 |
myeloid leukocyte | 2.60e-26 | 72 |
hematopoietic lineage restricted progenitor cell | 1.00e-18 | 120 |
nongranular leukocyte | 1.47e-17 | 115 |
myeloid cell | 9.66e-17 | 108 |
common myeloid progenitor | 9.66e-17 | 108 |
leukocyte | 3.09e-16 | 136 |
hematopoietic oligopotent progenitor cell | 4.49e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-12 | 161 |
hematopoietic stem cell | 3.82e-11 | 168 |
hematopoietic cell | 7.71e-11 | 177 |
kidney tubule cell | 6.15e-10 | 10 |
nephron tubule epithelial cell | 6.15e-10 | 10 |
kidney cell | 4.06e-09 | 17 |
kidney epithelial cell | 4.06e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
immune system | 9.15e-28 | 93 |
bone marrow | 2.83e-26 | 76 |
bone element | 1.22e-23 | 82 |
hemolymphoid system | 2.30e-22 | 108 |
hematopoietic system | 5.74e-21 | 98 |
blood island | 5.74e-21 | 98 |
skeletal element | 1.10e-20 | 90 |
skeletal system | 1.15e-17 | 100 |
kidney | 7.57e-12 | 26 |
kidney mesenchyme | 7.57e-12 | 26 |
upper urinary tract | 7.57e-12 | 26 |
kidney rudiment | 7.57e-12 | 26 |
kidney field | 7.57e-12 | 26 |
nephron tubule epithelium | 6.15e-10 | 10 |
cavitated compound organ | 1.99e-09 | 31 |
lateral plate mesoderm | 9.71e-09 | 203 |
abdomen element | 1.14e-08 | 54 |
abdominal segment element | 1.14e-08 | 54 |
musculoskeletal system | 1.08e-07 | 167 |
abdominal segment of trunk | 2.23e-07 | 60 |
abdomen | 2.23e-07 | 60 |