FFCP PHASE1:Hg19::chr5:83016667..83016681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1404 | |EntrezGene=1404 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2380 | |HGNC=2380 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC59 | |UniProt=D6RC59 | ||
|association_with_transcript=-35bp_to_ENST00000515590_5end | |association_with_transcript=-35bp_to_ENST00000515590_5end | ||
|cluster_id=chr5:83016667..83016681,- | |||
|description=CAGE_peak_1_at_HAPLN1_5end | |description=CAGE_peak_1_at_HAPLN1_5end | ||
|id=chr5:83016667..83016681,- | |id=chr5:83016667..83016681,- | ||
|ontology_enrichment_celltype=CL:0000055!1.64e-39!180;CL:0000359!4.34e-17!32;CL:0000192!1.34e-14!42;CL:0000514!1.34e-14!42;CL:0000057!2.08e-14!75;CL:0000187!1.43e-12!54;CL:0000680!1.48e-12!57;CL:0000056!1.48e-12!57;CL:0000355!1.48e-12!57;CL:0000393!3.97e-12!60;CL:0000211!3.97e-12!60;CL:0000183!5.80e-11!59;CL:0002620!8.03e-08!23;CL:0002494!4.16e-07!16;CL:0000062!9.81e-07!11;CL:0000375!9.81e-07!11;CL:0000335!9.81e-07!11 | |ontology_enrichment_celltype=CL:0000055!1.64e-39!180;CL:0000359!4.34e-17!32;CL:0000192!1.34e-14!42;CL:0000514!1.34e-14!42;CL:0000057!2.08e-14!75;CL:0000187!1.43e-12!54;CL:0000680!1.48e-12!57;CL:0000056!1.48e-12!57;CL:0000355!1.48e-12!57;CL:0000393!3.97e-12!60;CL:0000211!3.97e-12!60;CL:0000183!5.80e-11!59;CL:0002620!8.03e-08!23;CL:0002494!4.16e-07!16;CL:0000062!9.81e-07!11;CL:0000375!9.81e-07!11;CL:0000335!9.81e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.88e-14;32!CL:0002620;3.89e-09;23!CL:0000062;7.38e-09;9!CL:0000192;2.27e-08;43!CL:0002548;7.95e-07;6!CL:0000057;9.00e-07;73 | |ontology_enrichment_celltype_v019=CL:0000359;1.88e-14;32!CL:0002620;3.89e-09;23!CL:0000062;7.38e-09;9!CL:0000192;2.27e-08;43!CL:0002548;7.95e-07;6!CL:0000057;9.00e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.26e-17,76;CL:0000359,2.22e-15,32;CL:0000192,2.86e-11,43;CL:0000514,2.86e-11,43;CL:0000187,1.30e-09,55;CL:0000393,3.70e-09,61;CL:0000211,3.70e-09,61;CL:0002620,4.14e-09,23;CL:0000034,4.76e-09,441;CL:0000062,7.36e-09,11;CL:0000375,7.36e-09,11;CL:0000335,7.36e-09,11;CL:0000680,1.10e-08,58;CL:0000056,1.10e-08,58;CL:0000355,1.10e-08,58;CL:0000048,2.73e-08,427;CL:0000723,8.80e-08,433;CL:0002548,7.83e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000335;7.32e-09;11!CL:0000514;2.27e-08;43 | |ontology_enrichment_development_v019=CL:0000335;7.32e-09;11!CL:0000514;2.27e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.41e-07;5!DOID:450;2.41e-07;5!DOID:66;2.41e-07;5!DOID:423;2.41e-07;5!DOID:0080000;2.41e-07;5!DOID:11722;2.41e-07;5 | |ontology_enrichment_disease_v019=DOID:17;2.41e-07;5!DOID:450;2.41e-07;5!DOID:66;2.41e-07;5!DOID:423;2.41e-07;5!DOID:0080000;2.41e-07;5!DOID:11722;2.41e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.41e-07,5;DOID:450,2.41e-07,5;DOID:66,2.41e-07,5;DOID:423,2.41e-07,5;DOID:0080000,2.41e-07,5;DOID:11722,2.41e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.18e-14!84;UBERON:0000914!2.05e-12!83;UBERON:0002329!2.05e-12!83;UBERON:0003077!2.05e-12!83;UBERON:0003059!2.05e-12!83;UBERON:0007282!2.05e-12!83;UBERON:0009618!2.05e-12!83;UBERON:0007285!2.05e-12!83;UBERON:0002049!2.90e-12!79;UBERON:0007798!2.90e-12!79;UBERON:0001637!3.30e-12!42;UBERON:0003509!3.30e-12!42;UBERON:0004572!3.30e-12!42;UBERON:0001009!8.91e-12!113;UBERON:0001981!1.23e-11!60;UBERON:0007500!1.23e-11!60;UBERON:0004537!1.23e-11!60;UBERON:0006965!1.23e-11!60;UBERON:0004290!3.98e-11!70;UBERON:0004535!4.50e-11!110;UBERON:0001134!7.72e-11!61;UBERON:0002036!7.72e-11!61;UBERON:0003082!7.72e-11!61;UBERON:0002385!8.53e-11!63;UBERON:0001015!8.53e-11!63;UBERON:0000383!8.53e-11!63;UBERON:0004573!7.05e-10!33;UBERON:0004571!7.05e-10!33;UBERON:0007100!2.99e-09!27;UBERON:0000486!1.68e-08!82;UBERON:0000948!1.76e-08!24;UBERON:0005498!1.76e-08!24;UBERON:0004140!1.76e-08!24;UBERON:0009881!1.76e-08!24;UBERON:0004141!1.76e-08!24;UBERON:0003084!1.76e-08!24;UBERON:0007005!1.76e-08!24;UBERON:0004139!1.76e-08!24;UBERON:0004291!1.76e-08!24;UBERON:0000055!2.02e-08!69;UBERON:0003914!1.74e-07!118 | |ontology_enrichment_uberon=UBERON:0004872!1.18e-14!84;UBERON:0000914!2.05e-12!83;UBERON:0002329!2.05e-12!83;UBERON:0003077!2.05e-12!83;UBERON:0003059!2.05e-12!83;UBERON:0007282!2.05e-12!83;UBERON:0009618!2.05e-12!83;UBERON:0007285!2.05e-12!83;UBERON:0002049!2.90e-12!79;UBERON:0007798!2.90e-12!79;UBERON:0001637!3.30e-12!42;UBERON:0003509!3.30e-12!42;UBERON:0004572!3.30e-12!42;UBERON:0001009!8.91e-12!113;UBERON:0001981!1.23e-11!60;UBERON:0007500!1.23e-11!60;UBERON:0004537!1.23e-11!60;UBERON:0006965!1.23e-11!60;UBERON:0004290!3.98e-11!70;UBERON:0004535!4.50e-11!110;UBERON:0001134!7.72e-11!61;UBERON:0002036!7.72e-11!61;UBERON:0003082!7.72e-11!61;UBERON:0002385!8.53e-11!63;UBERON:0001015!8.53e-11!63;UBERON:0000383!8.53e-11!63;UBERON:0004573!7.05e-10!33;UBERON:0004571!7.05e-10!33;UBERON:0007100!2.99e-09!27;UBERON:0000486!1.68e-08!82;UBERON:0000948!1.76e-08!24;UBERON:0005498!1.76e-08!24;UBERON:0004140!1.76e-08!24;UBERON:0009881!1.76e-08!24;UBERON:0004141!1.76e-08!24;UBERON:0003084!1.76e-08!24;UBERON:0007005!1.76e-08!24;UBERON:0004139!1.76e-08!24;UBERON:0004291!1.76e-08!24;UBERON:0000055!2.02e-08!69;UBERON:0003914!1.74e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.61e-09;33!UBERON:0004571;9.61e-09;33!UBERON:0001637;1.73e-08;42!UBERON:0003509;1.73e-08;42!UBERON:0004572;1.73e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;9.61e-09;33!UBERON:0004571;9.61e-09;33!UBERON:0001637;1.73e-08;42!UBERON:0003509;1.73e-08;42!UBERON:0004572;1.73e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.58e-12,83;UBERON:0001637,7.46e-12,42;UBERON:0003509,7.46e-12,42;UBERON:0004572,7.46e-12,42;UBERON:0002049,4.79e-11,78;UBERON:0007798,4.79e-11,78;UBERON:0007500,3.17e-10,59;UBERON:0001981,3.17e-10,59;UBERON:0004537,3.17e-10,59;UBERON:0006965,3.17e-10,59;UBERON:0004535,3.32e-10,109;UBERON:0001009,1.39e-09,112;UBERON:0004573,2.31e-09,33;UBERON:0004571,2.31e-09,33;UBERON:0007524,6.63e-08,73;UBERON:0002097,6.85e-08,41;UBERON:0002385,9.91e-08,64;UBERON:0001015,9.91e-08,64;UBERON:0000383,9.91e-08,64;UBERON:0000055,1.02e-07,68;UBERON:0002329,1.20e-07,71;UBERON:0003059,1.20e-07,71;UBERON:0007282,1.20e-07,71;UBERON:0004290,1.20e-07,71;UBERON:0009618,1.20e-07,71;UBERON:0001134,1.30e-07,62;UBERON:0002036,1.30e-07,62;UBERON:0003082,1.30e-07,62;UBERON:0003077,2.01e-07,72;UBERON:0007285,2.01e-07,72;UBERON:0000948,6.40e-07,24;UBERON:0005498,6.40e-07,24;UBERON:0004140,6.40e-07,24;UBERON:0009881,6.40e-07,24;UBERON:0004141,6.40e-07,24;UBERON:0003084,6.40e-07,24;UBERON:0007005,6.40e-07,24;UBERON:0004139,6.40e-07,24;UBERON:0004291,6.40e-07,24 | |||
|phase1_expression=3.45188920614058,11.5614282901131,0.140954404095971,30.0219895059391,1.34088328328186,11.3404008133048,0,0,0.261185628199839,0.245733936501509,0,0,0,5.5694858832021,1.65698687863958,1.34465029290355,3.01347264011988,1.46062018077475,2.43966399395253,24.9935747895879,20.4000691244253,25.076377718247,1.43117993565528,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,1.66198622559563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.71911117614727,30.1755645950732,57.468825229146,25.0668955317945,36.2116297402059,194.845057027519,976.67618469739,9.26441208207865,7.09534071880205,5.27008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.549605231791222,0,0,0,43.733531749188,73.4456967654563,3.44263870114369,24.667949384398,3.90135220418193,86.9050280220576,188.945722441578,249.627558998166,2.17847724779836,2.96363478553314,3.26923806226917,11.3518070733699,8.06646294271999,0.234321431833797,0,0,0.298897361103602,0,0.161872944368132,0,0,0.491337269247072,0,20.1960485737949,1.97813543422845,0,0,0.505008341862199,0.250237039743928,0,11.4134181429018,80.9127780909412,3.15499923703853,22.7998688151642,323.977682054085,93.324578913714,37.723878406402,133.240446661475,54.7208930256111,52.816310709354,31.4537487200387,27.8480948198089,35.8568178993211,71.9436256595726,77.3219148595314,2.10139873864455,52.1864100999423,19.5459070561622,9.49539316938731,0,0,0,2.5614478287215,3.04818467139416,68.0896505215378,9.95146128147556,29.7738604033242,0,42.2413737290503,30.2323240950656,2.76269842704961,89.623010110172,75.7973455753065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,30.367502422839,0,0,0,0,0,0,0,0.34779121492523,90.0524684788752,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0,0,0,0,8.55362230113526,0,0,0,0.560655421726804,0,1.39342743059805,18.0980402060889,0,0,0,0,0.771622122786426,9.92943924162948,0.532844358032199,0,26.5884586641807,68.3289479528038,0,0,53.8527273594732,0,2.61460037580088,0,0,0,0,0.479249710983165,1.14861935834114,4.27910715122155,0.579125226670317,0.205476322550383,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,6.99341502799097,1.00034104211935,2.71265023699736,0,0,0.315404830067869,0,61.6939504441824,111.429676987433,24.8335371102012,298.901519340946,98.0843976641861,0.173767228936166,0.195801157462741,0,0,0,0,0,0,6.04780586659361,20.8410558567773,196.738249755296,52.4834376589848,0.512556597022804,141.742907991477,28.1494362001313,2.96836132889982,0,0,0,1.03850885836724,0,1.57117284469109,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,53.0187201298208,63.7798434386145,0,0,234.598537572473,0,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0.2023155617111,0.464845549297286,32.1108593767253,4.1822236209636,3.69640296211307,0.532306030317022,4.34966496037536,53.0027266637211,64.1199492604121,3.72158369359667,4.42931194606216,0.953150969619124,0.255897791311334,0.42793898803392,0,7.06453776179307,0,0,0.235624804691373,0.202182481573316,242.520791394703,0.421258456238981,0,15.8413768260335,11.6215161432431,0,0,2.26016233240486,0.551365343546124,175.811328438923,163.1037293144,1.73632660280006,2.62357900818653,9.53678771724709,64.7531111028478,7.88747687090276,60.6630019823138,188.53990970418,9.98678944147501,0.354761064070598,5.06658324714394,0,0,0.349934720244983,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,1.05836791361941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0.422250816255987,4.38345574152353,0.276283915531148,0,0,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,174.901055725147,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0,0,0,0,0,0,0,0,0,0.728341138602278,0,3.62972148145992,1.83643656978294,2.90658266291045,0.150323419414493,0,0,0,0,0,0,18.7210808567737,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0,0,0.0801588202515337,0,0,0,0.80175617316141,0.171594997861965,0,0,0,23.9191402689561,32.636088049448,0.509991088181609,0,0,0,0,0,0,11.1712960508902,2.52076466412852,2.15361907373044,0.798716001995964,0.858452096273142,0.223171457441873,0.940568614814168,7.20599767084807,0,0,0,0,0,0,0,0,1.76828463311521,1.2378549293751,0.415440338029185,0,0,0,0,0.0788057072991982,0.419636705079985,0,0,0,0,0,0,0,0.864221491201268,0,0,0,33.9072163352989,0,0,0,0,0,0,0,0.427149650270779,1.72924735609633,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9853743059552,8.30174075783498,0,0.686520205190771,0,0.466311601748341,3.84423389973048,0,0.449803112163605,0.155262956876259,5.80588690977198,1.06336685823198,4.17396049449387,0,27.7987804883221,2.0343536660233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| ||
|short_description=p1@HAPLN1 | |short_description=p1@HAPLN1 | ||
}} | }} |
Latest revision as of 01:09, 19 September 2015
Short description: | p1@HAPLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HAPLN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000515590_5end |
EntrezGene: | HAPLN1 |
HGNC: | 2380 |
UniProt: | D6RC59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.26e-17 | 76 |
vascular associated smooth muscle cell | 2.22e-15 | 32 |
smooth muscle cell | 2.86e-11 | 43 |
smooth muscle myoblast | 2.86e-11 | 43 |
muscle cell | 1.30e-09 | 55 |
electrically responsive cell | 3.70e-09 | 61 |
electrically active cell | 3.70e-09 | 61 |
skin fibroblast | 4.14e-09 | 23 |
stem cell | 4.76e-09 | 441 |
osteoblast | 7.36e-09 | 11 |
osteoprogenitor cell | 7.36e-09 | 11 |
mesenchyme condensation cell | 7.36e-09 | 11 |
muscle precursor cell | 1.10e-08 | 58 |
myoblast | 1.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-08 | 58 |
multi fate stem cell | 2.73e-08 | 427 |
somatic stem cell | 8.80e-08 | 433 |
cardiac fibroblast | 7.83e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.41e-07 | 5 |
myotonic disease | 2.41e-07 | 5 |
muscle tissue disease | 2.41e-07 | 5 |
myopathy | 2.41e-07 | 5 |
muscular disease | 2.41e-07 | 5 |
myotonic dystrophy | 2.41e-07 | 5 |