FFCP PHASE1:Hg19::chr17:20059358..20059401,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92521 | |EntrezGene=92521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30615 | |HGNC=30615 | ||
|TSSclassifier=strong | |||
|UniProt=Q5M775,F5H2Z1 | |UniProt=Q5M775,F5H2Z1 | ||
|association_with_transcript=0bp_to_ENST00000395522,ENST00000395525,ENST00000395527,ENST00000536879,uc002gwt.2,uc002gwu.2,uc002gwv.2,uc010vzf.1_5end | |association_with_transcript=0bp_to_ENST00000395522,ENST00000395525,ENST00000395527,ENST00000536879,uc002gwt.2,uc002gwu.2,uc002gwv.2,uc010vzf.1_5end | ||
|cluster_id=chr17:20059358..20059401,+ | |||
|coexpression_cluster_id=C3613 | |coexpression_cluster_id=C3613 | ||
|description=CAGE_peak_1_at_SPECC1_5end | |description=CAGE_peak_1_at_SPECC1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!2.03e-22!254;CL:0002076!1.61e-07!43 | |ontology_enrichment_celltype=CL:0000066!2.03e-22!254;CL:0002076!1.61e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.36e-07;42 | |ontology_enrichment_celltype_v019=CL:0002076;9.36e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.44e-22,253;CL:0002076,2.90e-08,42 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.16e-16!106;DOID:0050687!6.79e-13!143;DOID:162!6.91e-09!235;DOID:14566!1.12e-08!239;DOID:193!2.18e-07!29 | |ontology_enrichment_disease=DOID:305!1.16e-16!106;DOID:0050687!6.79e-13!143;DOID:162!6.91e-09!235;DOID:14566!1.12e-08!239;DOID:193!2.18e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:193;1.92e-07;29 | |ontology_enrichment_disease_v019=DOID:193;1.92e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:305,8.16e-17,106;DOID:0050687,3.21e-13,143;DOID:162,2.16e-09,235;DOID:14566,3.59e-09,239;DOID:193,1.72e-07,29 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;1.55e-11;34!UBERON:0002020;1.55e-11;34!UBERON:0001893;1.67e-11;34!UBERON:0002791;3.24e-11;32!UBERON:0001869;4.62e-11;32!UBERON:0002780;7.16e-10;41!UBERON:0001890;7.16e-10;41!UBERON:0000073;1.29e-09;53!UBERON:0002616;1.29e-09;53!UBERON:0000956;1.76e-09;25!UBERON:0000203;1.76e-09;25!UBERON:0001017;9.66e-09;75!UBERON:0002619;1.11e-08;22!UBERON:0000955;3.49e-08;68!UBERON:0001950;9.27e-08;20!UBERON:0001737;1.39e-07;9!UBERON:0001557;1.39e-07;9!UBERON:0001016;2.69e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0003528;1.55e-11;34!UBERON:0002020;1.55e-11;34!UBERON:0001893;1.67e-11;34!UBERON:0002791;3.24e-11;32!UBERON:0001869;4.62e-11;32!UBERON:0002780;7.16e-10;41!UBERON:0001890;7.16e-10;41!UBERON:0000073;1.29e-09;53!UBERON:0002616;1.29e-09;53!UBERON:0000956;1.76e-09;25!UBERON:0000203;1.76e-09;25!UBERON:0001017;9.66e-09;75!UBERON:0002619;1.11e-08;22!UBERON:0000955;3.49e-08;68!UBERON:0001950;9.27e-08;20!UBERON:0001737;1.39e-07;9!UBERON:0001557;1.39e-07;9!UBERON:0001016;2.69e-07;83 | ||
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| ||
|short_description=p1@SPECC1 | |short_description=p1@SPECC1 | ||
}} | }} |
Latest revision as of 01:07, 19 September 2015
Short description: | p1@SPECC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPECC1_5end |
Coexpression cluster: | C3613_optic_Hep2_corpus_lens_Mesenchymal_globus_Chondrocyte |
Association with transcript: | 0bp_to_ENST00000395522, ENST00000395525, ENST00000395527, ENST00000536879, uc002gwt.2, uc002gwu.2, uc002gwv.2, uc010vzf.1_5end |
EntrezGene: | SPECC1 |
HGNC: | 30615 |
UniProt: | Q5M775F5H2Z1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.44e-22 | 253 |
endo-epithelial cell | 2.90e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.16e-17 | 106 |
cell type cancer | 3.21e-13 | 143 |
cancer | 2.16e-09 | 235 |
disease of cellular proliferation | 3.59e-09 | 239 |
reproductive organ cancer | 1.72e-07 | 29 |