FFCP PHASE1:Hg19::chr17:19651598..19651620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=218 | |EntrezGene=218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=405 | |HGNC=405 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479677,ENST00000485231_5end | |association_with_transcript=0bp_to_ENST00000479677,ENST00000485231_5end | ||
|cluster_id=chr17:19651598..19651620,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_1_at_ALDH3A1_5end | |description=CAGE_peak_1_at_ALDH3A1_5end | ||
|id=chr17:19651598..19651620,- | |id=chr17:19651598..19651620,- | ||
|ontology_enrichment_celltype=CL:0000223!1.58e-16!59;CL:0000066!2.21e-16!254;CL:0002076!1.48e-15!43;CL:0002368!4.95e-10!13;CL:0002251!2.13e-08!21 | |ontology_enrichment_celltype=CL:0000223!1.58e-16!59;CL:0000066!2.21e-16!254;CL:0002076!1.48e-15!43;CL:0002368!4.95e-10!13;CL:0002251!2.13e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.50e-16;42!CL:0002368;3.09e-15;13!CL:0002251;6.53e-10;20!CL:0002202;1.27e-09;9!CL:0002632;1.27e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.34e-21,42;CL:0000223,4.51e-17,58;CL:0002368,3.01e-15,13;CL:0000066,6.40e-14,253;CL:0002251,6.22e-10,20;CL:0002202,1.27e-09,9;CL:0002632,1.27e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.04e-16;29!CL:0000223;8.70e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.14e-11!106 | |ontology_enrichment_disease=DOID:305!1.14e-11!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.79e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.02e-30!169;UBERON:0000925!3.02e-30!169;UBERON:0006595!3.02e-30!169;UBERON:0001007!1.77e-26!155;UBERON:0001555!1.77e-26!155;UBERON:0007026!1.77e-26!155;UBERON:0000077!1.09e-23!130;UBERON:0001004!1.41e-22!72;UBERON:0004921!3.53e-20!129;UBERON:0004185!3.53e-20!129;UBERON:0001041!1.42e-18!98;UBERON:0000065!1.00e-16!53;UBERON:0008947!9.37e-15!38;UBERON:0003258!9.37e-15!38;UBERON:0000072!1.08e-12!46;UBERON:0003104!6.94e-12!238;UBERON:0009142!6.94e-12!238;UBERON:0000481!7.27e-12!347;UBERON:0000165!5.93e-10!28;UBERON:0000930!5.93e-10!28;UBERON:0003102!8.39e-10!95;UBERON:0000161!3.02e-09!35;UBERON:0001444!3.90e-09!48;UBERON:0005178!7.40e-09!34;UBERON:0002224!7.40e-09!34;UBERON:0005911!8.02e-09!82;UBERON:0000166!1.40e-08!21;UBERON:0001737!1.80e-08!9;UBERON:0005181!2.04e-08!35;UBERON:0005157!5.97e-08!51;UBERON:0005153!1.16e-07!37;UBERON:0000475!1.34e-07!365;UBERON:0001048!2.39e-07!168;UBERON:0001557!7.53e-07!19 | |ontology_enrichment_uberon=UBERON:0004119!3.02e-30!169;UBERON:0000925!3.02e-30!169;UBERON:0006595!3.02e-30!169;UBERON:0001007!1.77e-26!155;UBERON:0001555!1.77e-26!155;UBERON:0007026!1.77e-26!155;UBERON:0000077!1.09e-23!130;UBERON:0001004!1.41e-22!72;UBERON:0004921!3.53e-20!129;UBERON:0004185!3.53e-20!129;UBERON:0001041!1.42e-18!98;UBERON:0000065!1.00e-16!53;UBERON:0008947!9.37e-15!38;UBERON:0003258!9.37e-15!38;UBERON:0000072!1.08e-12!46;UBERON:0003104!6.94e-12!238;UBERON:0009142!6.94e-12!238;UBERON:0000481!7.27e-12!347;UBERON:0000165!5.93e-10!28;UBERON:0000930!5.93e-10!28;UBERON:0003102!8.39e-10!95;UBERON:0000161!3.02e-09!35;UBERON:0001444!3.90e-09!48;UBERON:0005178!7.40e-09!34;UBERON:0002224!7.40e-09!34;UBERON:0005911!8.02e-09!82;UBERON:0000166!1.40e-08!21;UBERON:0001737!1.80e-08!9;UBERON:0005181!2.04e-08!35;UBERON:0005157!5.97e-08!51;UBERON:0005153!1.16e-07!37;UBERON:0000475!1.34e-07!365;UBERON:0001048!2.39e-07!168;UBERON:0001557!7.53e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;8.48e-19;44!UBERON:0000072;2.88e-15;37!UBERON:0001004;5.50e-14;65!UBERON:0001737;2.66e-12;9!UBERON:0001557;2.66e-12;9!UBERON:0005178;1.10e-11;34!UBERON:0002224;1.10e-11;34!UBERON:0005181;7.75e-11;35!UBERON:0000161;8.29e-10;19!UBERON:0000166;8.29e-10;19!UBERON:0000165;9.09e-10;28!UBERON:0004807;2.72e-09;22!UBERON:0007196;2.30e-08;15!UBERON:0001558;2.30e-08;15!UBERON:0001041;2.69e-08;14!UBERON:0002048;3.95e-08;22!UBERON:0000117;3.95e-08;22!UBERON:0000171;3.95e-08;22!UBERON:0000170;3.95e-08;22!UBERON:0000153;6.80e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.86e-34,74;UBERON:0000065,4.16e-24,54;UBERON:0004119,8.27e-23,160;UBERON:0000925,8.27e-23,160;UBERON:0006595,8.27e-23,160;UBERON:0008947,1.22e-21,38;UBERON:0003258,1.22e-21,38;UBERON:0001041,3.20e-20,87;UBERON:0001007,1.80e-19,145;UBERON:0001555,1.80e-19,145;UBERON:0007026,1.80e-19,145;UBERON:0000072,8.66e-18,47;UBERON:0004921,3.27e-15,118;UBERON:0000166,1.70e-13,22;UBERON:0005178,4.38e-13,34;UBERON:0002224,4.38e-13,34;UBERON:0005181,1.48e-12,35;UBERON:0001737,2.98e-12,9;UBERON:0000165,8.45e-11,29;UBERON:0000930,8.45e-11,29;UBERON:0000161,4.53e-10,36;UBERON:0001557,1.35e-09,19;UBERON:0000153,3.87e-09,62;UBERON:0007811,3.87e-09,62;UBERON:0000033,1.05e-08,56;UBERON:0001444,1.88e-08,49;UBERON:0007196,2.35e-08,15;UBERON:0001558,2.35e-08,15;UBERON:0002048,4.09e-08,22;UBERON:0000117,4.09e-08,22;UBERON:0000171,4.09e-08,22;UBERON:0000170,4.09e-08,22;UBERON:0005597,4.09e-08,22;UBERON:0000118,4.09e-08,22;UBERON:0005157,9.63e-08,47;UBERON:0003102,2.38e-07,99;UBERON:0000915,8.25e-07,52;UBERON:0003729,9.96e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,21.4115790620881,115.326286753315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,173.770611426517,65.060478456102,113.514481121204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,9.08099253950053,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,27.1079364288425,23.5628817998868,53.1586724586223,0,4.86634870302636,0,0,0.087834785693126,19.1884345604149,61.9301990097322,34.8537376217364,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,3.39184765154406,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,0,0,80.6773996463689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,4.89970011011744,1.71968044236475,6.09622108937016,0,0,0,0,0.168336113954066,0.375355559615893,0.831192346452549,0,0.30648779579902,0,0,0,0.640672166455702,0,0,0.309157587715317,0.515281080091258,2.41951913231067,0,0,0,0.0920498986422993,2.42469085228218,0,0.10075209822764,0,6.95739071387869,1.36373060295417,6.88331028933609,0,0,0,0,0.252320850875628,0,1.56449532329816,23.7999147131368,2.76269842704961,0,0,3.54920400119532,3.37169380156203,4.33819853790268,4.52205288202815,5.66486554640256,3.32178866755535,4.85392709376592,3.13954344200554,5.00171304030308,0,0,0,0,0,0,0,0,0.245976877086227,0,4.60951198716227,6.74410519545717,0.502644862058154,24.6285264121689,0,94.6340654604416,0,0,0,0,0,0,0,0,0,0,0,16.8720901176199,0,0.567100388969546,0,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,16.0806710167759,4.27910715122155,0.144781306667579,2.87666851570537,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04881922673162,1.50051156317903,0.542530047399471,0,0,0.473107245101804,0.35142424497814,0,0,0,0,0.368738337083406,0,0.783204629850962,0.343143423810856,0,0,0,0,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,3.60911646545913,3.40699659062816,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,16.8590613668198,20.1799570733361,22.715062824036,25.9975496798763,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0.6196469961995,0,0,0,0,0,2.32218398827431,0,0.379473173765715,2.0996083214699,25.3064156468097,171.597382537162,15.2447378805852,0,2.58303223602738,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,41.9018769327564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,8.567663494796,0.276283915531148,0,0.20453736500431,0,0,0,109.202916552122,0,0.887790650732402,0,0,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,328.863065545094,27.7136478819115,4.25497827182285,0,0,0,0.885741385813839,0.723578631752448,0,0,0,0.438770794307945,0.10893846351899,18.5433579890542,1.30815439456455,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0.442287822516696,0,0,0,0,1.14581926067151,0,0.234264445725339,0,16.6314926092276,0.242780379534093,0,0,0,0.252746318513952,0,0,37.2206168716024,10.2607506321405,36.7301514536454,23.8944859545918,0,0,0,103.675956464412,0,0,0,0.774050650312681,0.877071805034227,0.903270027585302,111.246401912217,0,24.179939263517,0,0,0,6.2576442475137,0.561111741760736,5.54977786322317,0,16.4263075555681,0,0,0.864328787928898,0,33.2328588809682,0,0,96.7963085368694,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.329663433524666,0.13480708770837,0.885847333632739,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,72.1184578338422,0,0.104909176269996,0,72.0735104118036,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,211.463331625031,1125.58959063972,7.47511887973863,0,82.4335720140919,0,0,0,0,0,0,0,0,77.2706153551153,0,0,0,1.14681839138014,0,0,0,0.124980407962107,0,0,0.941063278792687,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,4.83539870920016,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,5.16123108382811,4.86017883724842,0,0,0,0,0,1.53867458491389,29.2376312215497,0,0,0,0,0,0,0,0,0,0,0,15.1650655786994,0,0.0642292250964595,0,0,0,0,0,0,0,0,143.097274420809,0.183428598521679,0,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,1.98484471355718,0,451.640181705969,0,0,0,0.227662191351298,0,0,53.1612829255997,0,0,0,4.3380246737907,0.078493092850514,0,0.280272163313789,0,0,0,0.357382720883282,0,0,0,0,31.2896407886186,9.73095319435515,9.67763526539729,2.15113679410139,0,0,0,2.52017555398455,0,0,0,6.67421588583652,83.8795323878014,0,0.718639647993729,0,0.485710993059139,0,0,0,1717.57106956646,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,185.338988272673,0,0.0802413666891683,3.65168194123259,0,0,0,0,0,0.5290268405154,1.48798007266701,17.5626738879939,1.73050624849516,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,2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| ||
|short_description=p1@ALDH3A1 | |short_description=p1@ALDH3A1 | ||
}} | }} |
Latest revision as of 00:40, 19 September 2015
Short description: | p1@ALDH3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDH3A1_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 0bp_to_ENST00000479677, ENST00000485231_5end |
EntrezGene: | ALDH3A1 |
HGNC: | 405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.34e-21 | 42 |
endodermal cell | 4.51e-17 | 58 |
respiratory epithelial cell | 3.01e-15 | 13 |
epithelial cell | 6.40e-14 | 253 |
epithelial cell of alimentary canal | 6.22e-10 | 20 |
epithelial cell of tracheobronchial tree | 1.27e-09 | 9 |
epithelial cell of lower respiratory tract | 1.27e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.79e-10 | 106 |