FFCP PHASE1:Hg19::chr11:63438790..63438835,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:63438790..63438835,-
|short_description=p3@ATL3
|description=CAGE_peak_3_at_ATL3_5end
|association_with_transcript=247bp_to_NM_015459,uc001nxk.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25923 | |EntrezGene=25923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24526 | |HGNC=24526 | ||
|TSSclassifier=strong | |||
|UniProt=Q6DD88 | |UniProt=Q6DD88 | ||
|association_with_transcript=247bp_to_NM_015459,uc001nxk.1_5end | |||
|cluster_id=chr11:63438790..63438835,- | |||
|description=CAGE_peak_3_at_ATL3_5end | |||
|id=chr11:63438790..63438835,- | |||
|ontology_enrichment_celltype=CL:0000055!8.33e-16!180;CL:0000057!2.25e-13!75;CL:0000548!3.55e-09!679;CL:0000004!3.55e-09!679;CL:0000255!3.55e-09!679;CL:0000012!1.57e-08!682;CL:0000136!1.79e-08!15;CL:0002620!1.61e-07!23;CL:0000499!1.91e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.20e-07;13!CL:0002620;1.43e-07;23!CL:0000499;2.07e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.25e-13,76;CL:0000136,1.69e-08,15;CL:0002620,1.53e-07,23;CL:0000499,1.90e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.38e-10!95;UBERON:0000926!5.06e-09!448;UBERON:0004120!5.06e-09!448;UBERON:0006603!5.06e-09!448;UBERON:0000468!1.49e-08!659;UBERON:0000914!6.21e-08!83;UBERON:0002329!6.21e-08!83;UBERON:0003077!6.21e-08!83;UBERON:0003059!6.21e-08!83;UBERON:0007282!6.21e-08!83;UBERON:0009618!6.21e-08!83;UBERON:0007285!6.21e-08!83;UBERON:0002199!7.33e-07!45;UBERON:0002416!7.33e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.21e-11,99;UBERON:0000926,8.48e-08,315;UBERON:0004120,8.48e-08,315;UBERON:0006603,8.48e-08,315;UBERON:0002199,2.11e-07,46;UBERON:0002416,2.11e-07,46;UBERON:0002097,9.32e-07,41 | |||
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| ||
|short_description=p3@ATL3 | |||
}} | }} |
Latest revision as of 23:52, 18 September 2015
Short description: | p3@ATL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 247bp_to_NM_015459, uc001nxk.1_5end |
EntrezGene: | ATL3 |
HGNC: | 24526 |
UniProt: | Q6DD88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.25e-13 | 76 |
fat cell | 1.69e-08 | 15 |
skin fibroblast | 1.53e-07 | 23 |
stromal cell | 1.90e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.21e-11 | 99 |
mesoderm | 8.48e-08 | 315 |
mesoderm-derived structure | 8.48e-08 | 315 |
presumptive mesoderm | 8.48e-08 | 315 |
integument | 2.11e-07 | 46 |
integumental system | 2.11e-07 | 46 |
skin of body | 9.32e-07 | 41 |