FFCP PHASE1:Hg19::chr8:70983443..70983460,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63978 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14001 | |||
|TSSclassifier=strong | |||
|UniProt=Q9GZV8 | |||
|association_with_transcript=101bp_to_ENST00000276594,NM_024504,uc003xym.2_5end | |||
|cluster_id=chr8:70983443..70983460,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_PRDM14_5end | |||
|id=chr8:70983443..70983460,- | |||
|ontology_enrichment_celltype=CL:0002322!1.89e-58!5;CL:0000039!1.47e-27!7;CL:0000586!1.47e-27!7;CL:0000540!7.52e-18!6;CL:0000031!7.52e-18!6;CL:0000404!7.52e-18!6;CL:0000047!1.51e-13!8;CL:0000148!4.16e-11!10;CL:0000541!4.16e-11!10;CL:0000147!4.37e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.15e-66;5!CL:0000039;5.07e-31;7!CL:0000586;5.07e-31;7!CL:0002321;4.63e-22;15!CL:0000540;5.01e-20;6!CL:0000404;5.01e-20;6!CL:0000148;1.85e-12;10!CL:0000147;4.61e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.15e-66,5;CL:0000039,5.27e-31,7;CL:0000586,5.27e-31,7;CL:0000540,5.01e-20,6;CL:0000031,5.01e-20,6;CL:0000404,5.01e-20,6;CL:0000047,3.43e-15,8;CL:0000148,1.89e-12,10;CL:0000541,1.89e-12,10;CL:0000147,4.68e-09,14;CL:0000133,2.09e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.36e-33;10!UBERON:0005564;1.36e-33;10!CL:0000031;5.01e-20;6 | |||
|ontology_enrichment_disease=DOID:3095!3.81e-19!22;DOID:2994!3.81e-19!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.16e-21;22!DOID:2994;1.16e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.18e-21,22;DOID:2994,1.18e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.92e-37!8;UBERON:0003135!8.17e-27!11;UBERON:0000991!5.53e-20!21;UBERON:0009196!5.53e-20!21;UBERON:0009117!5.53e-20!21;UBERON:0005564!5.53e-20!21;UBERON:0004176!4.61e-19!22;UBERON:0003101!2.07e-13!22;UBERON:0000079!2.07e-13!22;UBERON:0002323!6.14e-09!46;UBERON:0003133!1.50e-08!48;UBERON:0004458!2.29e-08!49;UBERON:0005156!7.03e-07!59;UBERON:0000990!7.03e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.37e-27;8!UBERON:0003135;6.89e-20;11!UBERON:0000991;4.86e-16;21!UBERON:0000922;2.61e-13;49!UBERON:0003101;4.35e-10;22!UBERON:0000079;4.35e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.48e-27,8;UBERON:0003135,7.06e-20,11;UBERON:0000991,4.94e-16,21;UBERON:0009196,4.94e-16,21;UBERON:0009117,4.94e-16,21;UBERON:0005564,4.94e-16,21;UBERON:0004176,2.64e-15,22;UBERON:0003101,4.40e-10,22;UBERON:0000079,4.40e-10,22;UBERON:0002323,2.74e-07,46;UBERON:0003133,5.57e-07,48;UBERON:0004458,7.78e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4422399765321,34.4577397635862,19.4043884592096,9.53681706141408,14.1299676490352,19.7087773900948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.5553979778559,11.9659309839593,6.64704540846696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5042806140472,16.6083669384817,0,23.1514643514299,35.272697495054,29.6820525497549,17.2988202111739,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PRDM14 | |||
}} |
Latest revision as of 23:50, 18 September 2015
Short description: | p2@PRDM14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRDM14_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 101bp_to_ENST00000276594, NM_024504, uc003xym.2_5end |
EntrezGene: | PRDM14 |
HGNC: | 14001 |
UniProt: | Q9GZV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.15e-66 | 5 |
germ line cell | 5.27e-31 | 7 |
germ cell | 5.27e-31 | 7 |
neuron | 5.01e-20 | 6 |
neuroblast | 5.01e-20 | 6 |
electrically signaling cell | 5.01e-20 | 6 |
neuronal stem cell | 3.43e-15 | 8 |
melanocyte | 1.89e-12 | 10 |
melanoblast | 1.89e-12 | 10 |
pigment cell | 4.68e-09 | 14 |
neurectodermal cell | 2.09e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 3.48e-27 | 8 |
male reproductive organ | 7.06e-20 | 11 |
gonad | 4.94e-16 | 21 |
indifferent external genitalia | 4.94e-16 | 21 |
indifferent gonad | 4.94e-16 | 21 |
gonad primordium | 4.94e-16 | 21 |
external genitalia | 2.64e-15 | 22 |
male organism | 4.40e-10 | 22 |
male reproductive system | 4.40e-10 | 22 |
body cavity | 2.74e-07 | 46 |
reproductive organ | 5.57e-07 | 48 |
body cavity or lining | 7.78e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.18e-21 | 22 |
germ cell cancer | 1.18e-21 | 22 |