FFCP PHASE1:Hg19::chr18:21166865..21166956,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:21166865..21166956,-
|short_description=p2@NPC1
|description=CAGE_peak_2_at_NPC1_5end
|association_with_transcript=-284bp_to_NM_000271,uc002kum.3,uc010xba...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4864 | |EntrezGene=4864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7897 | |HGNC=7897 | ||
|TSSclassifier=strong | |||
|UniProt=O15118 | |UniProt=O15118 | ||
|association_with_transcript=-284bp_to_NM_000271,uc002kum.3,uc010xba.1_5end | |||
|cluster_id=chr18:21166865..21166956,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_NPC1_5end | |||
|id=chr18:21166865..21166956,- | |||
|ontology_enrichment_celltype=CL:0002057!1.82e-23!42;CL:0000766!3.70e-23!76;CL:0000738!9.55e-23!140;CL:0002009!5.68e-22!65;CL:0002194!6.51e-22!63;CL:0000576!6.51e-22!63;CL:0000040!6.51e-22!63;CL:0000559!6.51e-22!63;CL:0002087!8.84e-21!119;CL:0000860!2.14e-20!45;CL:0000557!2.41e-19!71;CL:0000839!4.83e-19!70;CL:0002031!6.64e-19!124;CL:0000037!8.85e-19!172;CL:0000566!8.85e-19!172;CL:0000988!7.21e-18!182;CL:0002032!5.86e-17!165;CL:0000837!5.86e-17!165;CL:0000763!1.42e-15!112;CL:0000049!1.42e-15!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-19;33!CL:0002057;1.04e-19;33!CL:0000473;9.04e-19;39!CL:0000234;9.04e-19;39!CL:0000576;1.06e-15;48!CL:0000766;1.37e-11;69!CL:0002087;5.69e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.68e-26,48;CL:0000234,1.68e-26,48;CL:0000766,1.60e-25,72;CL:0002194,6.31e-25,59;CL:0000576,6.31e-25,59;CL:0000040,6.31e-25,59;CL:0000559,6.31e-25,59;CL:0002009,6.33e-25,61;CL:0000860,8.44e-24,42;CL:0002057,8.44e-24,42;CL:0000738,9.52e-24,136;CL:0002087,3.13e-22,115;CL:0000557,1.79e-21,67;CL:0000839,3.64e-21,66;CL:0002031,6.26e-20,120;CL:0000037,1.95e-19,168;CL:0000988,3.57e-18,177;CL:0002032,1.44e-17,161;CL:0000837,1.44e-17,161;CL:0000763,1.07e-16,108;CL:0000049,1.07e-16,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.81e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.32e-21!115;UBERON:0001049!2.19e-19!57;UBERON:0005068!2.19e-19!57;UBERON:0006241!2.19e-19!57;UBERON:0007135!2.19e-19!57;UBERON:0002193!5.65e-17!112;UBERON:0002390!6.59e-17!102;UBERON:0003061!6.59e-17!102;UBERON:0002616!3.39e-16!59;UBERON:0002371!5.35e-16!80;UBERON:0001017!5.66e-16!82;UBERON:0005743!7.33e-16!86;UBERON:0001474!1.75e-15!86;UBERON:0002405!2.69e-15!115;UBERON:0003080!2.29e-14!42;UBERON:0002780!7.74e-14!41;UBERON:0001890!7.74e-14!41;UBERON:0006240!7.74e-14!41;UBERON:0000073!1.16e-13!94;UBERON:0001016!1.16e-13!94;UBERON:0000955!1.90e-13!69;UBERON:0006238!1.90e-13!69;UBERON:0003075!2.97e-12!86;UBERON:0007284!2.97e-12!86;UBERON:0002346!5.06e-12!90;UBERON:0002020!8.77e-12!34;UBERON:0003528!8.77e-12!34;UBERON:0001893!1.11e-11!34;UBERON:0002791!2.45e-11!33;UBERON:0001869!1.27e-10!32;UBERON:0004765!2.87e-10!101;UBERON:0001434!2.87e-10!101;UBERON:0003056!6.00e-09!61;UBERON:0002619!1.34e-08!22;UBERON:0000956!5.37e-08!25;UBERON:0000203!5.37e-08!25;UBERON:0001950!8.89e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.31e-11;53!UBERON:0002616;9.31e-11;53!UBERON:0002780;3.37e-10;41!UBERON:0001890;3.37e-10;41!UBERON:0001893;4.86e-10;34!UBERON:0003528;6.37e-10;34!UBERON:0002020;6.37e-10;34!UBERON:0002791;1.32e-09;32!UBERON:0001869;1.87e-09;32!UBERON:0002619;8.94e-09;22!UBERON:0001950;5.74e-08;20!UBERON:0000956;6.99e-08;25!UBERON:0000203;6.99e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.43e-21,114;UBERON:0001049,2.72e-19,56;UBERON:0005068,2.72e-19,56;UBERON:0006241,2.72e-19,56;UBERON:0007135,2.72e-19,56;UBERON:0002390,1.23e-18,98;UBERON:0003061,1.23e-18,98;UBERON:0002193,1.27e-18,108;UBERON:0002405,1.38e-18,93;UBERON:0002371,5.70e-18,76;UBERON:0000073,1.05e-17,53;UBERON:0002616,1.05e-17,53;UBERON:0001474,2.57e-17,82;UBERON:0001017,1.47e-15,81;UBERON:0002780,3.31e-14,41;UBERON:0001890,3.31e-14,41;UBERON:0003080,3.31e-14,41;UBERON:0006240,3.31e-14,41;UBERON:0004765,1.10e-13,90;UBERON:0001016,3.21e-13,89;UBERON:0000955,5.23e-13,68;UBERON:0006238,5.23e-13,68;UBERON:0003075,5.72e-13,82;UBERON:0007284,5.72e-13,82;UBERON:0002346,1.07e-12,86;UBERON:0003528,4.04e-12,34;UBERON:0002020,4.04e-12,34;UBERON:0001893,5.16e-12,34;UBERON:0002791,3.91e-11,32;UBERON:0001434,4.35e-11,100;UBERON:0001869,6.17e-11,32;UBERON:0003056,1.83e-09,61;UBERON:0002619,6.83e-09,22;UBERON:0000956,2.91e-08,25;UBERON:0000203,2.91e-08,25;UBERON:0001950,4.68e-08,20;UBERON:0010371,1.27e-07,104;UBERON:0003081,3.09e-07,203 | |||
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| ||
|short_description=p2@NPC1 | |||
}} | }} |
Latest revision as of 23:49, 18 September 2015
Short description: | p2@NPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NPC1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -284bp_to_NM_000271, uc002kum.3, uc010xba.1_5end |
EntrezGene: | NPC1 |
HGNC: | 7897 |
UniProt: | O15118 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.68e-26 | 48 |
phagocyte | 1.68e-26 | 48 |
myeloid leukocyte | 1.60e-25 | 72 |
monopoietic cell | 6.31e-25 | 59 |
monocyte | 6.31e-25 | 59 |
monoblast | 6.31e-25 | 59 |
promonocyte | 6.31e-25 | 59 |
macrophage dendritic cell progenitor | 6.33e-25 | 61 |
classical monocyte | 8.44e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.44e-24 | 42 |
leukocyte | 9.52e-24 | 136 |
nongranular leukocyte | 3.13e-22 | 115 |
granulocyte monocyte progenitor cell | 1.79e-21 | 67 |
myeloid lineage restricted progenitor cell | 3.64e-21 | 66 |
hematopoietic lineage restricted progenitor cell | 6.26e-20 | 120 |
hematopoietic stem cell | 1.95e-19 | 168 |
hematopoietic cell | 3.57e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.44e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-17 | 161 |
myeloid cell | 1.07e-16 | 108 |
common myeloid progenitor | 1.07e-16 | 108 |