FFCP PHASE1:Hg19::chr12:52911718..52911760,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:52911718..52911760,-
|short_description=p3@KRT5
|description=CAGE_peak_3_at_KRT5_5end
|association_with_transcript=0bp_to_ENST00000547890,ENST00000548409_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3852 | |EntrezGene=3852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6442 | |HGNC=6442 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000547890,ENST00000548409_5end | |||
|cluster_id=chr12:52911718..52911760,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_3_at_KRT5_5end | |||
|id=chr12:52911718..52911760,- | |||
|ontology_enrichment_celltype=CL:0002076!9.11e-27!43;CL:0000223!1.45e-18!59;CL:0002159!2.07e-17!13;CL:0002251!4.25e-17!21;CL:0002368!8.78e-15!13;CL:0000066!1.02e-12!254;CL:0000622!1.30e-10!5;CL:0000362!7.76e-09!8;CL:0000154!9.71e-09!6;CL:0000244!1.56e-08!4;CL:0000731!1.56e-08!4;CL:0000240!1.61e-08!6;CL:0000311!1.61e-08!6;CL:0000079!1.61e-08!6;CL:0000237!1.61e-08!6;CL:0000036!1.61e-08!6;CL:0000357!1.61e-08!6;CL:0000114!1.61e-08!6;CL:0002202!1.79e-08!9;CL:0002632!1.79e-08!9;CL:0000076!4.32e-08!62;CL:0002328!1.35e-07!3;CL:0002077!2.09e-07!33;CL:0000068!2.45e-07!3;CL:0000069!2.45e-07!3;CL:0000307!2.45e-07!3;CL:0000377!2.45e-07!3;CL:0002623!5.54e-07!3;CL:0002621!6.74e-07!3;CL:0002166!8.18e-07!3;CL:0000312!9.22e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.39e-25;42!CL:0002368;4.83e-24;13!CL:0002159;3.44e-22;14!CL:0000622;1.97e-16;5!CL:0002251;2.80e-14;20!CL:0000154;1.24e-13;6!CL:0002202;1.38e-13;9!CL:0002632;1.38e-13;9!CL:0000244;5.41e-13;4!CL:0000731;5.41e-13;4!CL:0002328;1.83e-11;3!CL:0000307;4.67e-11;3!CL:0002623;1.98e-10;3!CL:0002621;2.40e-10;3!CL:0002166;3.63e-10;3!CL:0002077;7.09e-10;34!CL:0000240;1.93e-09;6!CL:0000311;1.93e-09;6!CL:0000079;1.93e-09;6!CL:0000237;1.93e-09;6!CL:0000362;2.42e-09;9!CL:0000150;5.81e-09;9!CL:0000575;4.30e-08;2!CL:0002327;7.36e-08;4!CL:0000317;1.06e-07;2!CL:1000448;1.06e-07;2!CL:0002308;1.06e-07;2!CL:0002140;1.06e-07;2!CL:0000312;8.07e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.62e-32,42;CL:0002368,4.78e-24,13;CL:0000066,3.02e-22,253;CL:0002159,3.60e-22,14;CL:0000223,9.82e-22,58;CL:0000622,2.04e-16,5;CL:0002251,2.82e-14,20;CL:0000154,1.27e-13,6;CL:0002202,1.38e-13,9;CL:0002632,1.38e-13,9;CL:0000244,5.24e-13,4;CL:0000731,5.24e-13,4;CL:0002328,1.80e-11,3;CL:0002077,2.86e-11,34;CL:0000068,4.75e-11,3;CL:0000069,4.75e-11,3;CL:0000307,4.75e-11,3;CL:0000377,4.75e-11,3;CL:0002623,1.80e-10,3;CL:0002621,2.48e-10,3;CL:0002166,3.41e-10,3;CL:0000240,1.93e-09,6;CL:0000311,1.93e-09,6;CL:0000079,1.93e-09,6;CL:0000237,1.93e-09,6;CL:0000036,1.93e-09,6;CL:0000357,1.93e-09,6;CL:0000114,1.93e-09,6;CL:0000362,2.59e-09,9;CL:0000076,4.91e-09,63;CL:0000150,5.91e-09,9;CL:0000575,4.30e-08,2;CL:0002327,7.28e-08,4;CL:0000317,1.20e-07,2;CL:1000448,1.20e-07,2;CL:0002308,1.20e-07,2;CL:0002140,1.20e-07,2;CL:0002321,3.82e-07,250;CL:0000312,8.07e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;5.32e-12;58!CL:0000377;4.67e-11;3!CL:0000357;1.93e-09;6!CL:0000114;1.93e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!1.85e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.11e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.48e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.45e-15!72;UBERON:0000166!6.31e-15!21;UBERON:0000161!5.22e-13!35;UBERON:0004119!2.90e-12!169;UBERON:0000925!2.90e-12!169;UBERON:0006595!2.90e-12!169;UBERON:0000165!4.77e-12!28;UBERON:0000930!4.77e-12!28;UBERON:0004121!8.46e-11!169;UBERON:0000924!2.77e-10!173;UBERON:0006601!2.77e-10!173;UBERON:0000153!4.46e-10!129;UBERON:0007811!4.46e-10!129;UBERON:0000974!5.08e-10!10;UBERON:0000365!1.28e-09!5;UBERON:0003729!1.72e-09!5;UBERON:0003102!3.09e-09!95;UBERON:0000065!4.38e-09!53;UBERON:0007196!2.71e-08!14;UBERON:0001558!2.71e-08!14;UBERON:0000033!3.51e-08!123;UBERON:0005910!6.29e-08!6;UBERON:0003343!1.18e-07!4;UBERON:0004785!1.18e-07!4;UBERON:0007023!1.32e-07!115;UBERON:0004815!1.35e-07!3;UBERON:0002031!1.35e-07!3;UBERON:0001444!1.55e-07!48;UBERON:0000064!2.18e-07!219;UBERON:0005631!2.74e-07!14;UBERON:0000158!2.74e-07!14;UBERON:0006562!4.58e-07!11;UBERON:0003126!5.79e-07!7;UBERON:0001005!5.79e-07!7;UBERON:0001949!6.74e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.65e-12;12!UBERON:0000165;1.44e-11;28!UBERON:0004815;1.83e-11;3!UBERON:0002031;1.83e-11;3!UBERON:0000365;2.11e-10;5!UBERON:0001949;2.40e-10;3!UBERON:0000161;1.65e-09;19!UBERON:0000166;1.65e-09;19!UBERON:0005910;1.14e-08;6!UBERON:0003729;2.56e-08;13!UBERON:0001911;7.36e-08;4!UBERON:0007196;8.03e-08;15!UBERON:0001558;8.03e-08;15!UBERON:0001708;1.01e-07;4!UBERON:0008895;1.01e-07;4!UBERON:0002419;1.06e-07;2!UBERON:0007771;1.06e-07;2!UBERON:0003297;1.06e-07;2!UBERON:0001821;1.06e-07;2!UBERON:0003487;1.06e-07;2!UBERON:0001820;1.06e-07;2!UBERON:0001003;1.82e-07;15!UBERON:0007376;1.82e-07;15!UBERON:0005631;4.29e-07;10!UBERON:0000158;4.29e-07;10!UBERON:0002185;5.31e-07;5!UBERON:0010371;5.81e-07;31!UBERON:0000305;6.95e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.03e-14,99;UBERON:0000166,1.47e-12,22;UBERON:0001004,1.65e-12,74;UBERON:0004815,1.80e-11,3;UBERON:0002031,1.80e-11,3;UBERON:0004119,2.35e-11,160;UBERON:0000925,2.35e-11,160;UBERON:0006595,2.35e-11,160;UBERON:0000165,4.49e-11,29;UBERON:0000930,4.49e-11,29;UBERON:0000033,7.43e-11,56;UBERON:0000153,9.34e-11,62;UBERON:0007811,9.34e-11,62;UBERON:0000365,2.06e-10,5;UBERON:0001949,2.48e-10,3;UBERON:0000161,3.54e-10,36;UBERON:0005631,1.93e-09,14;UBERON:0000158,1.93e-09,14;UBERON:0005910,1.11e-08,6;UBERON:0003729,2.68e-08,13;UBERON:0001444,3.03e-08,49;UBERON:0001911,7.28e-08,4;UBERON:0005333,7.28e-08,4;UBERON:0008425,7.28e-08,4;UBERON:0005311,7.28e-08,4;UBERON:0007196,8.03e-08,15;UBERON:0001558,8.03e-08,15;UBERON:0001708,9.64e-08,4;UBERON:0008895,9.64e-08,4;UBERON:0002419,1.20e-07,2;UBERON:0007771,1.20e-07,2;UBERON:0003297,1.20e-07,2;UBERON:0001821,1.20e-07,2;UBERON:0003487,1.20e-07,2;UBERON:0001820,1.20e-07,2;UBERON:0005089,1.20e-07,2;UBERON:0005088,1.20e-07,2;UBERON:0001003,1.88e-07,15;UBERON:0007376,1.88e-07,15;UBERON:0007383,1.88e-07,15;UBERON:0002185,5.26e-07,5;UBERON:0000305,6.73e-07,7 | |||
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| ||
|short_description=p3@KRT5 | |||
}} | }} |
Latest revision as of 23:31, 18 September 2015
Short description: | p3@KRT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KRT5_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | 0bp_to_ENST00000547890, ENST00000548409_5end |
EntrezGene: | KRT5 |
HGNC: | 6442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.48e-09 | 14 |