FFCP PHASE1:Hg19::chr4:82393009..82393037,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153020 | |EntrezGene=153020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24881 | |HGNC=24881 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N437 | |UniProt=Q8N437 | ||
|association_with_transcript=6bp_to_ENST00000395570,ENST00000436139_5end | |association_with_transcript=6bp_to_ENST00000395570,ENST00000436139_5end | ||
|cluster_id=chr4:82393009..82393037,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_2_at_RASGEF1B_5end | |description=CAGE_peak_2_at_RASGEF1B_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.36e-44!140;CL:0002031!4.43e-38!124;CL:0002087!2.54e-36!119;CL:0000037!3.96e-32!172;CL:0000566!3.96e-32!172;CL:0000766!6.94e-32!76;CL:0000557!1.41e-31!71;CL:0002057!3.51e-30!42;CL:0000839!1.45e-29!70;CL:0000988!7.49e-29!182;CL:0002009!7.83e-29!65;CL:0002032!1.25e-28!165;CL:0000837!1.25e-28!165;CL:0002194!1.89e-27!63;CL:0000576!1.89e-27!63;CL:0000040!1.89e-27!63;CL:0000559!1.89e-27!63;CL:0000860!2.78e-26!45;CL:0000763!2.41e-19!112;CL:0000049!2.41e-19!112;CL:0000542!9.38e-09!53;CL:0000051!9.38e-09!53;CL:0000838!1.31e-08!52;CL:0002393!3.08e-07!9;CL:0002397!3.08e-07!9;CL:0000236!8.89e-07!14 | |ontology_enrichment_celltype=CL:0000738!1.36e-44!140;CL:0002031!4.43e-38!124;CL:0002087!2.54e-36!119;CL:0000037!3.96e-32!172;CL:0000566!3.96e-32!172;CL:0000766!6.94e-32!76;CL:0000557!1.41e-31!71;CL:0002057!3.51e-30!42;CL:0000839!1.45e-29!70;CL:0000988!7.49e-29!182;CL:0002009!7.83e-29!65;CL:0002032!1.25e-28!165;CL:0000837!1.25e-28!165;CL:0002194!1.89e-27!63;CL:0000576!1.89e-27!63;CL:0000040!1.89e-27!63;CL:0000559!1.89e-27!63;CL:0000860!2.78e-26!45;CL:0000763!2.41e-19!112;CL:0000049!2.41e-19!112;CL:0000542!9.38e-09!53;CL:0000051!9.38e-09!53;CL:0000838!1.31e-08!52;CL:0002393!3.08e-07!9;CL:0002397!3.08e-07!9;CL:0000236!8.89e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-26;33!CL:0002057;1.44e-26;33!CL:0000473;5.80e-26;39!CL:0000234;5.80e-26;39!CL:0000576;2.89e-22;48!CL:0000766;1.26e-18;69!CL:0002087;8.24e-12;104!CL:0000738;1.50e-11;136!CL:0000763;1.37e-07;100!CL:0000236;3.54e-07;13 | |ontology_enrichment_celltype_v019=CL:0000860;1.44e-26;33!CL:0002057;1.44e-26;33!CL:0000473;5.80e-26;39!CL:0000234;5.80e-26;39!CL:0000576;2.89e-22;48!CL:0000766;1.26e-18;69!CL:0002087;8.24e-12;104!CL:0000738;1.50e-11;136!CL:0000763;1.37e-07;100!CL:0000236;3.54e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.63e-52,136;CL:0002031,1.05e-45,120;CL:0002087,2.43e-44,115;CL:0000557,2.04e-42,67;CL:0000766,5.63e-42,72;CL:0000473,8.88e-41,48;CL:0000234,8.88e-41,48;CL:0002009,4.79e-40,61;CL:0000839,8.28e-40,66;CL:0000037,7.76e-39,168;CL:0002194,2.64e-38,59;CL:0000576,2.64e-38,59;CL:0000040,2.64e-38,59;CL:0000559,2.64e-38,59;CL:0000860,3.27e-36,42;CL:0002057,3.27e-36,42;CL:0000988,8.95e-36,177;CL:0002032,1.44e-34,161;CL:0000837,1.44e-34,161;CL:0000763,5.89e-26,108;CL:0000049,5.89e-26,108;CL:0002393,1.97e-08,9;CL:0002397,1.97e-08,9;CL:0000542,3.40e-08,53;CL:0000051,3.40e-08,53;CL:0000838,5.02e-08,52;CL:0000236,3.55e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;3.87e-26;42!CL:0000049;1.42e-07;108 | |ontology_enrichment_development_v019=CL:0002057;3.87e-26;42!CL:0000049;1.42e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.94e-07;41!UBERON:0001890;1.94e-07;41!UBERON:0003528;2.40e-07;34!UBERON:0002020;2.40e-07;34!UBERON:0002791;4.23e-07;32!UBERON:0001893;6.62e-07;34!UBERON:0001869;8.82e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.94e-07;41!UBERON:0001890;1.94e-07;41!UBERON:0003528;2.40e-07;34!UBERON:0002020;2.40e-07;34!UBERON:0002791;4.23e-07;32!UBERON:0001893;6.62e-07;34!UBERON:0001869;8.82e-07;32 | ||
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| ||
|short_description=p2@RASGEF1B | |short_description=p2@RASGEF1B | ||
}} | }} |
Latest revision as of 23:25, 18 September 2015
Short description: | p2@RASGEF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASGEF1B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 6bp_to_ENST00000395570, ENST00000436139_5end |
EntrezGene: | RASGEF1B |
HGNC: | 24881 |
UniProt: | Q8N437 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.63e-52 | 136 |
hematopoietic lineage restricted progenitor cell | 1.05e-45 | 120 |
nongranular leukocyte | 2.43e-44 | 115 |
granulocyte monocyte progenitor cell | 2.04e-42 | 67 |
myeloid leukocyte | 5.63e-42 | 72 |
defensive cell | 8.88e-41 | 48 |
phagocyte | 8.88e-41 | 48 |
macrophage dendritic cell progenitor | 4.79e-40 | 61 |
myeloid lineage restricted progenitor cell | 8.28e-40 | 66 |
hematopoietic stem cell | 7.76e-39 | 168 |
monopoietic cell | 2.64e-38 | 59 |
monocyte | 2.64e-38 | 59 |
monoblast | 2.64e-38 | 59 |
promonocyte | 2.64e-38 | 59 |
classical monocyte | 3.27e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.27e-36 | 42 |
hematopoietic cell | 8.95e-36 | 177 |
hematopoietic oligopotent progenitor cell | 1.44e-34 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-34 | 161 |
myeloid cell | 5.89e-26 | 108 |
common myeloid progenitor | 5.89e-26 | 108 |
intermediate monocyte | 1.97e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.97e-08 | 9 |
lymphocyte | 3.40e-08 | 53 |
common lymphoid progenitor | 3.40e-08 | 53 |
lymphoid lineage restricted progenitor cell | 5.02e-08 | 52 |
B cell | 3.55e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-36 | 76 |
hematopoietic system | 1.23e-35 | 98 |
blood island | 1.23e-35 | 98 |
immune system | 3.98e-32 | 93 |
bone element | 1.06e-31 | 82 |
hemolymphoid system | 2.77e-31 | 108 |
skeletal element | 2.72e-26 | 90 |
skeletal system | 2.62e-22 | 100 |
adult organism | 5.32e-21 | 114 |
neural tube | 4.05e-11 | 56 |
neural rod | 4.05e-11 | 56 |
future spinal cord | 4.05e-11 | 56 |
neural keel | 4.05e-11 | 56 |
regional part of forebrain | 3.69e-10 | 41 |
forebrain | 3.69e-10 | 41 |
anterior neural tube | 3.69e-10 | 41 |
future forebrain | 3.69e-10 | 41 |
regional part of nervous system | 6.10e-10 | 53 |
regional part of brain | 6.10e-10 | 53 |
central nervous system | 2.70e-09 | 81 |
lateral plate mesoderm | 3.84e-09 | 203 |
brain grey matter | 6.35e-09 | 34 |
gray matter | 6.35e-09 | 34 |
telencephalon | 1.08e-08 | 34 |
regional part of telencephalon | 3.72e-08 | 32 |
nervous system | 3.93e-08 | 89 |
cerebral hemisphere | 6.90e-08 | 32 |
brain | 8.56e-08 | 68 |
future brain | 8.56e-08 | 68 |
musculoskeletal system | 9.16e-07 | 167 |