FFCP PHASE1:Hg19::chr10:70320115..70320126,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:70320115..70320126,+ to FFCP PHASE1:Hg19::chr10:70320115..70320126,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80312 | |EntrezGene=80312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29484 | |HGNC=29484 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFU7 | |UniProt=Q8NFU7 | ||
|association_with_transcript=0bp_to_NM_030625,uc001jok.3_5end | |||
|cluster_id=chr10:70320115..70320126,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_3_at_TET1_5end | |||
|id=chr10:70320115..70320126,+ | |||
|ontology_enrichment_celltype=CL:0000333!4.09e-08!41;CL:0000039!5.58e-08!7;CL:0000586!5.58e-08!7;CL:0000133!5.70e-07!59;CL:0000243!7.83e-07!15;CL:0000125!7.83e-07!15;CL:0000030!7.83e-07!15;CL:0000339!7.83e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.83e-19;7!CL:0000586;4.83e-19;7!CL:0002322;1.47e-17;5!CL:0002321;1.35e-10;15!CL:0000182;2.32e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.15e-19,7;CL:0000586,6.15e-19,7;CL:0002322,4.47e-18,5;CL:0000182,2.96e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.30e-09;10!UBERON:0005564;1.30e-09;10!UBERON:0004161;4.60e-08;11!UBERON:0003104;3.03e-07;31!UBERON:0009497;9.13e-07;13 | |||
|ontology_enrichment_disease=DOID:3095!2.14e-11!22;DOID:2994!2.14e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.05e-18;22!DOID:2994;4.05e-18;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.24e-18,22;DOID:2994,5.24e-18,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.01e-15!94;UBERON:0001016!4.01e-15!94;UBERON:0005743!1.33e-11!86;UBERON:0001017!1.35e-11!82;UBERON:0000955!7.93e-11!69;UBERON:0006238!7.93e-11!69;UBERON:0000924!3.85e-10!173;UBERON:0006601!3.85e-10!173;UBERON:0001049!4.06e-10!57;UBERON:0005068!4.06e-10!57;UBERON:0006241!4.06e-10!57;UBERON:0007135!4.06e-10!57;UBERON:0002346!4.88e-10!90;UBERON:0004121!1.88e-09!169;UBERON:0003075!2.86e-09!86;UBERON:0007284!2.86e-09!86;UBERON:0002616!3.71e-09!59;UBERON:0000153!9.97e-09!129;UBERON:0007811!9.97e-09!129;UBERON:0000033!2.71e-08!123;UBERON:0000475!2.00e-07!365;UBERON:0000481!7.66e-07!347;UBERON:0002780!8.08e-07!41;UBERON:0001890!8.08e-07!41;UBERON:0006240!8.08e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.71e-15;49!UBERON:0000473;9.49e-12;8!UBERON:0003135;1.95e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.00e-12,8;UBERON:0003135,1.73e-08,11 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0.246242116153576,0.204000691244253,0,1.14494394852423,0.958120975510189,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0.283604451492204,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0.933633106199299,0,0,0.454072282934794,0,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0.491337269247072,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0.538168907066586,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.292311015483596,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0,0,1.95157929807353,1.59035721985782,1.97529702878181,2.59152637538426,5.2987378683882,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0.763976851116555,0,3.4214489204541,0,0.300343057843917,0.571652865261156,0.224262168690721,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0.686286847621712,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0,0,0,0.131124414959424,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.460511024178389,0.275673144969061,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,1.28381696410176,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.430234056612155,0.0982490410131212,0,0.354761064070598,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6023610669121,1.92495971052672,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,1.62310970137278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.586032717087576,0.485442086998054,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0.844501632511974,0.597743964753209,0.552567831062295,0,0.102268682502155,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0.361789315876224,1.52581736317083,0.331737779793674,0.591095237907095,0,0,0,0.230850775511391,0,0.69169171316418,1.25660702173681,2.06430006651815,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0.332423363800313,1.35357396370308,0.784250137270958,1.84603745673427,0.37950746544837,0.158936578980379,0,0,0.424059214301822,0.649165919226273,1.99052386215701,0.353830258013357,2.4441205797345,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,1.20990716048664,0.30607276163049,0.252746318513952,0.150323419414493,0.311064574191741,0,0.330991955875499,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0.193978032976839,0.0882561266915003,0.90392296312213,0,0,0.0633107959558787,0.195551382734803,0,0,0.39961921916426,0,0,0.343189995723929,0,0.372757606696298,0,0.951329442515298,0.418411385249333,0.203996435272644,0.288950589901519,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.873385142327441,0,3.49487848582361,2.52106183383116,2.30764403467266,2.35912403489647,0,0,0,0.136203406111576,4.1795818600905,3.02586760513914,3.73896304226267,0,0,0.121499113316049,0,0.157611414598396,0.577000469484979,0.211200673038813,0,0,0,0,2.034148301238,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0.52893040697076,0,0,0.213574825135389,1.10043013569766,0,0,0.592834895693833,0,0,1.08803560673895,0,0,0.655745261419609,0,0,0,0.250381861413,0,0.776503360757966,0.248385611765534,0.415045904808692,0.124980407962107,0,0,0,0,0,0,1.16856654923612,0,0,0,0,0,0,0.466311601748341,0,0,0,0.310525913752519,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,1.07824811396682,0.629063767423586,2.62103131660833,0.509197589862076,0.425149840203366,0.247871528518004,0.558644917973244,0.318004350653419,0,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0.504143392443436,0.207471757392654,0.322951291263702,1.42769420259154,0,0.471878893390961,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0.676892955143315,0,0,0.261906694481422,0,0,0,0,0,0.19024743058172,2.73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| 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| ||
|short_description=p3@TET1 | |||
}} | }} |
Latest revision as of 23:18, 18 September 2015
Short description: | p3@TET1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TET1_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_NM_030625, uc001jok.3_5end |
EntrezGene: | TET1 |
HGNC: | 29484 |
UniProt: | Q8NFU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.15e-19 | 7 |
germ cell | 6.15e-19 | 7 |
embryonic stem cell | 4.47e-18 | 5 |
hepatocyte | 2.96e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
testis | 8.00e-12 | 8 |
male reproductive organ | 1.73e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.24e-18 | 22 |
germ cell cancer | 5.24e-18 | 22 |