FFCP PHASE1:Hg19::chr7:50861133..50861160,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2887 | |EntrezGene=2887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4564 | |HGNC=4564 | ||
|TSSclassifier=strong | |||
|UniProt=Q13322 | |UniProt=Q13322 | ||
|association_with_transcript=0bp_to_ENST00000335866,ENST00000402497,NM_001001555,uc003tpm.2,uc003tpn.2_5end | |association_with_transcript=0bp_to_ENST00000335866,ENST00000402497,NM_001001555,uc003tpm.2,uc003tpn.2_5end | ||
|cluster_id=chr7:50861133..50861160,- | |||
|description=CAGE_peak_1_at_GRB10_5end | |description=CAGE_peak_1_at_GRB10_5end | ||
|id=chr7:50861133..50861160,- | |id=chr7:50861133..50861160,- | ||
|ontology_enrichment_celltype=CL:0000115!2.23e-13!35;CL:0002078!7.50e-13!44;CL:0002139!1.12e-12!24;CL:0000222!1.20e-12!119;CL:0002321!1.08e-11!248;CL:0000220!1.75e-11!246;CL:0000071!1.99e-10!18;CL:0002546!1.99e-10!18;CL:0000213!5.79e-07!57;CL:0000215!5.79e-07!57 | |ontology_enrichment_celltype=CL:0000115!2.23e-13!35;CL:0002078!7.50e-13!44;CL:0002139!1.12e-12!24;CL:0000222!1.20e-12!119;CL:0002321!1.08e-11!248;CL:0000220!1.75e-11!246;CL:0000071!1.99e-10!18;CL:0002546!1.99e-10!18;CL:0000213!5.79e-07!57;CL:0000215!5.79e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.10e-12;24!CL:0000115;8.34e-12;36!CL:0000071;2.03e-10;18!CL:0002078;6.08e-09;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.83e-14,36;CL:0002078,2.10e-13,45;CL:0000222,2.80e-13,121;CL:0002139,1.05e-12,24;CL:0002321,3.52e-12,250;CL:0000071,1.89e-10,18;CL:0002546,1.89e-10,18;CL:0000213,2.57e-07,58;CL:0000215,2.57e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;2.03e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.03e-10;18!UBERON:0001986;2.03e-10;18!UBERON:0004852;2.03e-10;18!UBERON:0002049;1.63e-09;75!UBERON:0007798;1.63e-09;75!UBERON:0001637;2.04e-09;42!UBERON:0003509;2.04e-09;42!UBERON:0004572;2.04e-09;42!UBERON:0000055;2.10e-09;65!UBERON:0007500;2.45e-09;56!UBERON:0001981;2.45e-09;56!UBERON:0004537;2.45e-09;56!UBERON:0003914;7.46e-09;74!UBERON:0000487;1.21e-08;22!UBERON:0007100;2.86e-08;25!UBERON:0004573;5.97e-08;33!UBERON:0004571;5.97e-08;33!UBERON:0006914;7.01e-08;25!UBERON:0000490;1.27e-07;33!UBERON:0000948;3.26e-07;22!UBERON:0000025;7.41e-07;93 | |||
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| ||
|short_description=p1@GRB10 | |short_description=p1@GRB10 | ||
}} | }} |
Latest revision as of 23:14, 18 September 2015
Short description: | p1@GRB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRB10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000335866, ENST00000402497, NM_001001555, uc003tpm.2, uc003tpn.2_5end |
EntrezGene: | GRB10 |
HGNC: | 4564 |
UniProt: | Q13322 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.83e-14 | 36 |
meso-epithelial cell | 2.10e-13 | 45 |
mesodermal cell | 2.80e-13 | 121 |
endothelial cell of vascular tree | 1.05e-12 | 24 |
embryonic cell | 3.52e-12 | 250 |
blood vessel endothelial cell | 1.89e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.89e-10 | 18 |
lining cell | 2.57e-07 | 58 |
barrier cell | 2.57e-07 | 58 |