FFCP PHASE1:Hg19::chr17:18353495..18353501,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37809 | |HGNC=37809 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENST00000453883_5end | |association_with_transcript=-56bp_to_ENST00000453883_5end | ||
|cluster_id=chr17:18353495..18353501,+ | |||
|coexpression_cluster_id=C585 | |coexpression_cluster_id=C585 | ||
|description=CAGE_peak_1_at_KRT16P4_5end | |description=CAGE_peak_1_at_KRT16P4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000453!1.62e-23!5;CL:0002166!5.63e-16!3;CL:0000990!5.70e-13!8;CL:0002159!1.01e-12!13;CL:0001014!5.95e-11!2;CL:0001016!5.95e-11!2;CL:0000451!1.45e-10!10;CL:0002077!2.62e-10!33;CL:0002274!2.37e-09!5;CL:0000457!2.37e-09!5;CL:0002191!2.37e-09!5;CL:0000097!2.37e-09!5;CL:0000831!2.37e-09!5;CL:0002028!2.37e-09!5;CL:0002541!1.15e-07!3;CL:0000240!3.21e-07!6;CL:0000311!3.21e-07!6;CL:0000079!3.21e-07!6;CL:0000237!3.21e-07!6;CL:0000036!3.21e-07!6;CL:0000357!3.21e-07!6;CL:0000114!3.21e-07!6 | |ontology_enrichment_celltype=CL:0000453!1.62e-23!5;CL:0002166!5.63e-16!3;CL:0000990!5.70e-13!8;CL:0002159!1.01e-12!13;CL:0001014!5.95e-11!2;CL:0001016!5.95e-11!2;CL:0000451!1.45e-10!10;CL:0002077!2.62e-10!33;CL:0002274!2.37e-09!5;CL:0000457!2.37e-09!5;CL:0002191!2.37e-09!5;CL:0000097!2.37e-09!5;CL:0000831!2.37e-09!5;CL:0002028!2.37e-09!5;CL:0002541!1.15e-07!3;CL:0000240!3.21e-07!6;CL:0000311!3.21e-07!6;CL:0000079!3.21e-07!6;CL:0000237!3.21e-07!6;CL:0000036!3.21e-07!6;CL:0000357!3.21e-07!6;CL:0000114!3.21e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002166;6.66e-33;3!CL:0001014;6.69e-22;2!CL:0001016;6.69e-22;2!CL:0000097;3.60e-19;5!CL:0002541;3.46e-15;3!CL:0000222;1.47e-11;1!CL:0002566;1.47e-11;1!CL:0000163;6.39e-11;9!CL:0002537;1.69e-09;5!CL:0000453;2.47e-09;5!CL:0000349;3.23e-09;19!CL:0002077;8.99e-09;34!CL:0000197;4.66e-08;6!CL:0000098;4.66e-08;6!CL:0002167;4.66e-08;6!CL:0000840;6.38e-08;5!CL:0002159;1.69e-07;14 | |ontology_enrichment_celltype_v019=CL:0002166;6.66e-33;3!CL:0001014;6.69e-22;2!CL:0001016;6.69e-22;2!CL:0000097;3.60e-19;5!CL:0002541;3.46e-15;3!CL:0000222;1.47e-11;1!CL:0002566;1.47e-11;1!CL:0000163;6.39e-11;9!CL:0002537;1.69e-09;5!CL:0000453;2.47e-09;5!CL:0000349;3.23e-09;19!CL:0002077;8.99e-09;34!CL:0000197;4.66e-08;6!CL:0000098;4.66e-08;6!CL:0002167;4.66e-08;6!CL:0000840;6.38e-08;5!CL:0002159;1.69e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,6.66e-33,3;CL:0001014,6.01e-22,2;CL:0001016,6.01e-22,2;CL:0000097,4.08e-19,5;CL:0002028,4.08e-19,5;CL:0002541,3.46e-15,3;CL:0002566,1.47e-11,1;CL:0002077,6.82e-11,34;CL:0000163,6.84e-11,9;CL:0002537,1.69e-09,5;CL:0000453,2.36e-09,5;CL:0000349,3.23e-09,19;CL:0000197,4.66e-08,6;CL:0000098,4.66e-08,6;CL:0002167,4.66e-08,6;CL:0000840,6.16e-08,5;CL:0001029,6.16e-08,5;CL:0002159,1.69e-07,14 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!4.25e-12!4;UBERON:0001704!4.25e-12!4;UBERON:0002090!3.36e-08!6;UBERON:0001737!3.50e-08!9;UBERON:0000476!1.15e-07!3;UBERON:0000920!1.15e-07!3 | |ontology_enrichment_uberon=UBERON:0001708!4.25e-12!4;UBERON:0001704!4.25e-12!4;UBERON:0002090!3.36e-08!6;UBERON:0001737!3.50e-08!9;UBERON:0000476!1.15e-07!3;UBERON:0000920!1.15e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.36e-25;4!UBERON:0008895;7.36e-25;4!UBERON:0011159;5.05e-20;5!UBERON:0005631;2.59e-17;10!UBERON:0000158;2.59e-17;10!UBERON:0003124;3.46e-15;3!UBERON:0000920;3.46e-15;3!UBERON:0011137;2.06e-09;11!UBERON:0010323;2.06e-09;11!UBERON:0000478;2.50e-07;24!UBERON:0000305;5.03e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001708;7.36e-25;4!UBERON:0008895;7.36e-25;4!UBERON:0011159;5.05e-20;5!UBERON:0005631;2.59e-17;10!UBERON:0000158;2.59e-17;10!UBERON:0003124;3.46e-15;3!UBERON:0000920;3.46e-15;3!UBERON:0011137;2.06e-09;11!UBERON:0010323;2.06e-09;11!UBERON:0000478;2.50e-07;24!UBERON:0000305;5.03e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,7.36e-25,4;UBERON:0008895,7.36e-25,4;UBERON:0011159,5.05e-20,5;UBERON:0010188,8.59e-17,6;UBERON:0002539,8.59e-17,6;UBERON:0008816,8.59e-17,6;UBERON:0000920,3.46e-15,3;UBERON:0005631,1.94e-12,14;UBERON:0000158,1.94e-12,14;UBERON:0010323,2.06e-09,11;UBERON:0011137,1.69e-07,14;UBERON:0000478,2.50e-07,24;UBERON:0000305,5.03e-07,7;UBERON:0003124,5.19e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70297735647684,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0.323292113637624,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4961201568265,660.673710206115,727.73157414517,0,0,0.383382679165211,0,0,2.28060927094849,2.88239906833923,1.2624243342638,1.33345578013555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68808170616869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,202.521374728905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,705.967441369349,5.64232893582013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,208.626758464675,7.60260025235457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,11.6070293183692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.531459361253452,0.327130788511688,0,0,0,0,0,0,0,0,93.9990291874667,127.525838306759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70297735647684,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0.323292113637624,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4961201568265,660.673710206115,727.73157414517,0,0,0.383382679165211,0,0,2.28060927094849,2.88239906833923,1.2624243342638,1.33345578013555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68808170616869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,202.521374728905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,705.967441369349,5.64232893582013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,208.626758464675,7.60260025235457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,11.6070293183692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.531459361253452,0.327130788511688,0,0,0,0,0,0,0,0,93.9990291874667,127.525838306759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@KRT16P4 | |short_description=p1@KRT16P4 | ||
}} | }} |
Latest revision as of 23:11, 18 September 2015
Short description: | p1@KRT16P4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT16P4_5end |
Coexpression cluster: | C585_Mallassezderived_amniotic_Small_chorionic_nasal_Keratinocyte_Sebocyte |
Association with transcript: | -56bp_to_ENST00000453883_5end |
EntrezGene: | NA |
HGNC: | 37809 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 6.66e-33 | 3 |
CD1a-positive Langerhans cell | 6.01e-22 | 2 |
immature CD1a-positive Langerhans cell | 6.01e-22 | 2 |
mast cell | 4.08e-19 | 5 |
basophil mast progenitor cell | 4.08e-19 | 5 |
chorionic membrane mesenchymal stem cell | 3.46e-15 | 3 |
dark melanocyte | 1.47e-11 | 1 |
ecto-epithelial cell | 6.82e-11 | 34 |
endocrine cell | 6.84e-11 | 9 |
amnion mesenchymal stem cell | 1.69e-09 | 5 |
Langerhans cell | 2.36e-09 | 5 |
extraembryonic cell | 3.23e-09 | 19 |
receptor cell | 4.66e-08 | 6 |
sensory epithelial cell | 4.66e-08 | 6 |
olfactory epithelial cell | 4.66e-08 | 6 |
immature conventional dendritic cell | 6.16e-08 | 5 |
common dendritic progenitor | 6.16e-08 | 5 |
general ecto-epithelial cell | 1.69e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 7.36e-25 | 4 |
splanchnocranium | 7.36e-25 | 4 |
primary subdivision of cranial skeletal system | 5.05e-20 | 5 |
protuberance | 8.59e-17 | 6 |
pharyngeal arch | 8.59e-17 | 6 |
embryonic head | 8.59e-17 | 6 |
egg chorion | 3.46e-15 | 3 |
extraembryonic membrane | 1.94e-12 | 14 |
membranous layer | 1.94e-12 | 14 |
cranial skeletal system | 2.06e-09 | 11 |
axial skeletal system | 1.69e-07 | 14 |
extraembryonic structure | 2.50e-07 | 24 |
amnion | 5.03e-07 | 7 |
chorion | 5.19e-07 | 7 |