FFCP PHASE1:Hg19::chr21:47545703..47545747,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-149bp_to_AL360197_5end | |association_with_transcript=-149bp_to_AL360197_5end | ||
|cluster_id=chr21:47545703..47545747,+ | |||
|coexpression_cluster_id=C198 | |coexpression_cluster_id=C198 | ||
|description=CAGE_peak_15_at_COL6A2_5end | |description=CAGE_peak_15_at_COL6A2_5end | ||
|id=chr21:47545703..47545747,+ | |id=chr21:47545703..47545747,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.82e-42!180;CL:0000057!2.24e-23!75;CL:0000680!5.40e-21!57;CL:0000056!5.40e-21!57;CL:0000355!5.40e-21!57;CL:0000187!3.87e-20!54;CL:0000183!1.61e-19!59;CL:0000393!2.13e-18!60;CL:0000211!2.13e-18!60;CL:0000192!7.02e-17!42;CL:0000514!7.02e-17!42;CL:0000048!9.44e-14!430;CL:0000359!3.97e-13!32;CL:0000723!1.13e-12!436;CL:0000034!4.52e-12!444;CL:0002620!5.37e-10!23;CL:0000222!3.17e-08!119;CL:0000499!4.02e-07!27;CL:0002570!6.03e-07!8 | |ontology_enrichment_celltype=CL:0000055!4.82e-42!180;CL:0000057!2.24e-23!75;CL:0000680!5.40e-21!57;CL:0000056!5.40e-21!57;CL:0000355!5.40e-21!57;CL:0000187!3.87e-20!54;CL:0000183!1.61e-19!59;CL:0000393!2.13e-18!60;CL:0000211!2.13e-18!60;CL:0000192!7.02e-17!42;CL:0000514!7.02e-17!42;CL:0000048!9.44e-14!430;CL:0000359!3.97e-13!32;CL:0000723!1.13e-12!436;CL:0000034!4.52e-12!444;CL:0002620!5.37e-10!23;CL:0000222!3.17e-08!119;CL:0000499!4.02e-07!27;CL:0002570!6.03e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000134;5.68e-12;55!CL:0002620;7.11e-12;23!CL:0000723;3.88e-11;61!CL:0000359;1.09e-10;32!CL:0000192;1.36e-10;43!CL:0000187;1.57e-10;55!CL:0000048;3.56e-10;58!CL:0000057;7.21e-10;73!CL:0000393;9.96e-10;61!CL:0000211;9.96e-10;61!CL:0002570;8.02e-09;8!CL:0002320;2.16e-08;188!CL:0000034;1.16e-07;69!CL:0000499;6.89e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.77e-25,76;CL:0000048,2.77e-20,427;CL:0000723,2.58e-19,433;CL:0000680,7.07e-19,58;CL:0000056,7.07e-19,58;CL:0000355,7.07e-19,58;CL:0000187,1.57e-18,55;CL:0000034,4.48e-18,441;CL:0000393,3.97e-16,61;CL:0000211,3.97e-16,61;CL:0000192,1.46e-14,43;CL:0000514,1.46e-14,43;CL:0002620,2.78e-12,23;CL:0000359,5.31e-11,32;CL:0002320,1.92e-10,361;CL:0002570,8.50e-09,8;CL:0000134,3.43e-08,354;CL:0000499,6.40e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;1.36e-10;43!CL:0000355;3.79e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.26e-28!83;UBERON:0002329!9.26e-28!83;UBERON:0003077!9.26e-28!83;UBERON:0003059!9.26e-28!83;UBERON:0007282!9.26e-28!83;UBERON:0009618!9.26e-28!83;UBERON:0007285!9.26e-28!83;UBERON:0004290!6.17e-26!70;UBERON:0002385!9.36e-22!63;UBERON:0001015!9.36e-22!63;UBERON:0000383!9.36e-22!63;UBERON:0000486!1.39e-21!82;UBERON:0001134!2.34e-21!61;UBERON:0002036!2.34e-21!61;UBERON:0003082!2.34e-21!61;UBERON:0005256!6.42e-19!143;UBERON:0002100!1.33e-12!216;UBERON:0003104!1.64e-10!238;UBERON:0009142!1.64e-10!238;UBERON:0004573!1.97e-10!33;UBERON:0004571!1.97e-10!33;UBERON:0003102!2.82e-10!95;UBERON:0001637!5.92e-10!42;UBERON:0003509!5.92e-10!42;UBERON:0004572!5.92e-10!42;UBERON:0002199!1.06e-09!45;UBERON:0002416!1.06e-09!45;UBERON:0004872!4.10e-09!84;UBERON:0000475!6.71e-09!365;UBERON:0000481!2.26e-08!347;UBERON:0001013!5.59e-08!14;UBERON:0001135!1.40e-07!15;UBERON:0000490!1.63e-07!138;UBERON:0002049!2.03e-07!79;UBERON:0007798!2.03e-07!79;UBERON:0001981!2.68e-07!60;UBERON:0007500!2.68e-07!60;UBERON:0004537!2.68e-07!60;UBERON:0006965!2.68e-07!60;UBERON:0002097!2.90e-07!40;UBERON:0000926!7.73e-07!448;UBERON:0004120!7.73e-07!448;UBERON:0006603!7.73e-07!448 | |ontology_enrichment_uberon=UBERON:0000914!9.26e-28!83;UBERON:0002329!9.26e-28!83;UBERON:0003077!9.26e-28!83;UBERON:0003059!9.26e-28!83;UBERON:0007282!9.26e-28!83;UBERON:0009618!9.26e-28!83;UBERON:0007285!9.26e-28!83;UBERON:0004290!6.17e-26!70;UBERON:0002385!9.36e-22!63;UBERON:0001015!9.36e-22!63;UBERON:0000383!9.36e-22!63;UBERON:0000486!1.39e-21!82;UBERON:0001134!2.34e-21!61;UBERON:0002036!2.34e-21!61;UBERON:0003082!2.34e-21!61;UBERON:0005256!6.42e-19!143;UBERON:0002100!1.33e-12!216;UBERON:0003104!1.64e-10!238;UBERON:0009142!1.64e-10!238;UBERON:0004573!1.97e-10!33;UBERON:0004571!1.97e-10!33;UBERON:0003102!2.82e-10!95;UBERON:0001637!5.92e-10!42;UBERON:0003509!5.92e-10!42;UBERON:0004572!5.92e-10!42;UBERON:0002199!1.06e-09!45;UBERON:0002416!1.06e-09!45;UBERON:0004872!4.10e-09!84;UBERON:0000475!6.71e-09!365;UBERON:0000481!2.26e-08!347;UBERON:0001013!5.59e-08!14;UBERON:0001135!1.40e-07!15;UBERON:0000490!1.63e-07!138;UBERON:0002049!2.03e-07!79;UBERON:0007798!2.03e-07!79;UBERON:0001981!2.68e-07!60;UBERON:0007500!2.68e-07!60;UBERON:0004537!2.68e-07!60;UBERON:0006965!2.68e-07!60;UBERON:0002097!2.90e-07!40;UBERON:0000926!7.73e-07!448;UBERON:0004120!7.73e-07!448;UBERON:0006603!7.73e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.83e-11;31!UBERON:0001015;1.83e-11;31!UBERON:0000383;1.83e-11;31!UBERON:0004573;9.45e-10;33!UBERON:0004571;9.45e-10;33!UBERON:0002204;1.49e-09;70!UBERON:0001013;1.92e-09;14!UBERON:0002199;3.12e-09;46!UBERON:0002416;3.12e-09;46!UBERON:0002384;7.25e-09;198!UBERON:0002097;7.88e-08;41!UBERON:0003102;8.34e-08;50!UBERON:0001637;1.70e-07;42!UBERON:0003509;1.70e-07;42!UBERON:0004572;1.70e-07;42!UBERON:0002067;2.69e-07;9!UBERON:0001135;2.80e-07;15!UBERON:0004905;9.16e-07;8!UBERON:0000982;9.16e-07;8!UBERON:0004770;9.16e-07;8 | |||
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| ||
|short_description=p15@COL6A2 | |short_description=p15@COL6A2 | ||
}} | }} |
Latest revision as of 23:03, 18 September 2015
Short description: | p15@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -149bp_to_AL360197_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.77e-25 | 76 |
multi fate stem cell | 2.77e-20 | 427 |
somatic stem cell | 2.58e-19 | 433 |
muscle precursor cell | 7.07e-19 | 58 |
myoblast | 7.07e-19 | 58 |
multi-potent skeletal muscle stem cell | 7.07e-19 | 58 |
muscle cell | 1.57e-18 | 55 |
stem cell | 4.48e-18 | 441 |
electrically responsive cell | 3.97e-16 | 61 |
electrically active cell | 3.97e-16 | 61 |
smooth muscle cell | 1.46e-14 | 43 |
smooth muscle myoblast | 1.46e-14 | 43 |
skin fibroblast | 2.78e-12 | 23 |
vascular associated smooth muscle cell | 5.31e-11 | 32 |
connective tissue cell | 1.92e-10 | 361 |
mesenchymal stem cell of adipose | 8.50e-09 | 8 |
mesenchymal cell | 3.43e-08 | 354 |
stromal cell | 6.40e-07 | 28 |