FFCP PHASE1:Hg19::chr14:106938552..106938596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=20169 | |HGNC=20169 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_ENST00000334298_5end | |||
|cluster_id=chr14:106938552..106938596,+ | |||
|description=CAGE_peak_1_at_LINC00221_5end | |||
|id=chr14:106938552..106938596,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.77e-09!7;CL:0000586!1.77e-09!7;CL:0000054!2.99e-09!2;CL:0000137!2.99e-09!2;CL:0000092!2.99e-09!2;CL:0000080!2.50e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.65e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.71e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.97e-10!143;DOID:162!6.70e-10!235;DOID:14566!1.50e-09!239;DOID:200!2.99e-09!2;DOID:4305!2.99e-09!2;DOID:1036!1.66e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.65e-08;1!DOID:3165;1.65e-08;1!DOID:0060121;1.65e-08;1!DOID:2438;1.65e-08;1!DOID:4418;1.65e-08;1!DOID:1036;2.63e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.35e-10,235;DOID:14566,2.73e-10,239;DOID:0050687,9.64e-10,143;DOID:0060085,1.84e-08,1;DOID:3165,1.84e-08,1;DOID:0060121,1.84e-08,1;DOID:2438,1.84e-08,1;DOID:4418,1.84e-08,1;DOID:1036,2.56e-08,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.37e-08;1!UBERON:0001282;2.46e-08;1!UBERON:0009842;2.46e-08;1!UBERON:0003704;2.46e-08;1!UBERON:0001171;2.46e-08;1!UBERON:0001172;2.46e-08;1!UBERON:0002331;2.83e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.37e-08,1;UBERON:0001282,2.13e-08,1;UBERON:0009842,2.13e-08,1;UBERON:0003704,2.13e-08,1;UBERON:0001171,2.13e-08,1;UBERON:0001172,2.13e-08,1;UBERON:0002331,2.86e-07,10;UBERON:0000358,2.86e-07,10;UBERON:0000307,2.86e-07,10;UBERON:0000091,2.86e-07,10;UBERON:0000087,2.86e-07,10;UBERON:0007010,2.86e-07,10;UBERON:0007806,2.86e-07,10;UBERON:0008780,2.86e-07,10;UBERON:0005728,2.86e-07,10 | |||
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| ||
|short_description=p1@LINC00221 | |||
}} | }} |
Latest revision as of 22:43, 18 September 2015
Short description: | p1@LINC00221 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00221_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_ENST00000334298_5end |
EntrezGene: | NA |
HGNC: | 20169 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.37e-08 | 1 |
intralobular bile duct | 2.13e-08 | 1 |
acinus | 2.13e-08 | 1 |
intrahepatic bile duct | 2.13e-08 | 1 |
portal lobule | 2.13e-08 | 1 |
hepatic acinus | 2.13e-08 | 1 |
umbilical cord | 2.86e-07 | 10 |
blastocyst | 2.86e-07 | 10 |
blastula | 2.86e-07 | 10 |
bilaminar disc | 2.86e-07 | 10 |
inner cell mass | 2.86e-07 | 10 |
cleaving embryo | 2.86e-07 | 10 |
connecting stalk | 2.86e-07 | 10 |
inner cell mass derived epiblast | 2.86e-07 | 10 |
extraembryonic mesoderm | 2.86e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.35e-10 | 235 |
disease of cellular proliferation | 2.73e-10 | 239 |
cell type cancer | 9.64e-10 | 143 |
organ system benign neoplasm | 1.84e-08 | 1 |
skin benign neoplasm | 1.84e-08 | 1 |
integumentary system benign neoplasm | 1.84e-08 | 1 |
dermis tumor | 1.84e-08 | 1 |
cutaneous fibrous histiocytoma | 1.84e-08 | 1 |
chronic leukemia | 2.56e-08 | 8 |