FFCP PHASE1:Hg19::chr1:179112145..179112151,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:179112145..179112151,- to FFCP PHASE1:Hg19::chr1:179112145..179112151,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27 | |EntrezGene=27 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=77 | |HGNC=77 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000509520_5end | |||
|cluster_id=chr1:179112145..179112151,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_ABL2_5end | |||
|id=chr1:179112145..179112151,- | |||
|ontology_enrichment_celltype=CL:0000548!2.44e-16!679;CL:0000004!2.44e-16!679;CL:0000255!2.44e-16!679;CL:0000012!7.72e-16!682;CL:0000063!1.46e-15!578;CL:0002057!1.23e-12!42;CL:0000144!1.38e-11!625;CL:0000860!1.48e-11!45;CL:0000557!2.45e-11!71;CL:0002009!2.94e-11!65;CL:0002194!4.14e-10!63;CL:0000576!4.14e-10!63;CL:0000040!4.14e-10!63;CL:0000559!4.14e-10!63;CL:0000003!4.74e-10!722;CL:0002371!7.34e-10!591;CL:0000839!7.51e-10!70;CL:0000766!1.88e-09!76;CL:0000055!2.01e-07!180;CL:0000057!7.64e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-34;33!CL:0002057;1.02e-34;33!CL:0000473;2.42e-25;39!CL:0000234;2.42e-25;39!CL:0000576;1.64e-15;48!CL:0000147;2.31e-11;14!CL:0000149;3.85e-11;4!CL:0000766;1.34e-10;69!CL:0002586;1.46e-08;3!CL:0002573;3.45e-08;2!CL:0001014;6.63e-07;2!CL:0001016;6.63e-07;2!CL:0000148;7.17e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.34e-28,42;CL:0002057,2.34e-28,42;CL:0000473,3.54e-26,48;CL:0000234,3.54e-26,48;CL:0002009,1.07e-22,61;CL:0000557,5.29e-22,67;CL:0002194,1.45e-19,59;CL:0000576,1.45e-19,59;CL:0000040,1.45e-19,59;CL:0000559,1.45e-19,59;CL:0000839,1.27e-18,66;CL:0000766,1.61e-16,72;CL:0000147,1.53e-11,14;CL:0000149,2.18e-11,4;CL:0000763,5.97e-11,108;CL:0000049,5.97e-11,108;CL:0002031,3.48e-09,120;CL:0002586,8.18e-09,3;CL:0002573,3.22e-08,2;CL:0000738,2.40e-07,136;CL:0002087,4.05e-07,115;CL:0000148,6.60e-07,10;CL:0000541,6.60e-07,10;CL:0001014,7.05e-07,2;CL:0001016,7.05e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;9.44e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-09!80;UBERON:0004765!5.35e-09!101;UBERON:0001434!5.35e-09!101;UBERON:0001474!4.00e-08!86;UBERON:0002204!4.34e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.46e-08;3!UBERON:0001782;1.46e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.56e-18,76;UBERON:0004765,2.94e-17,90;UBERON:0001474,1.19e-16,82;UBERON:0002405,3.13e-16,93;UBERON:0001434,9.21e-15,100;UBERON:0002193,6.33e-13,108;UBERON:0002390,9.00e-13,98;UBERON:0003061,9.00e-13,98;UBERON:0001782,8.18e-09,3;UBERON:0005424,8.18e-09,3;UBERON:0002204,2.78e-07,167 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0,0.251085279189606,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0.671746422719773,0,0.257575567634187,0.290796477559129,0.755751887377619,0.242584061187816,0.929716147622738,4.11167888021826,4.95530193432166,3.45230870786581,1.0246428261164,3.07426898855161,6.55016793399575,9.68227025375739,4.06279459783025,1.50593871634084,1.36453075028923,3.59557575112135,2.44867113896722,8.66508373105453,5.11469700639233,0.329851300186716,0.598390972864896,0,1.16083695451434,4.53908179752912,9.34233373493363,4.01997864410789,3.65038042894141,3.9093992046921,1.21079900526674,9.57521853567668,13.9243450473989,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.724232594804119,1.5905718941022,3.40644409211845,0.661743720148475,0,0.175669571386252,0,0,0,0.324547393654683,0.696518949197069,0.930705723632056,0,0,0,0.596287222100115,0,0.347140501607594,0,0,1.10047216776027,0.626984899610432,0.258416759169329,0.71153252537342,1.00416183829401,0,0,0.732186172644509,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.633152558322899,3.97227542439656,1.72101972449288,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.352303495931295,0.485618833104395,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.673344455816265,0.375355559615893,0.554128230968366,0,0.612975591598039,0.300476117813194,0.226864366320042,2.15267562826634,0.213557388818567,0.211931901159562,1.80054657650641,0.309157587715317,0.257640540045629,0.18611685633159,1.68776332241266,0.68205903612839,1.26216887122057,0.276149695926898,0,1.42003837006646,0.403008392910561,1.3564847384839,1.35282597214308,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0.721879481669586,1.0647612003586,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,1.07865046528132,0.392442930250692,1.92373578473195,0.738155454624648,0,0,0,0,0,0,0,0,0,3.18275827685014,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0,0.352226082707465,1.15493158208859,0,0,0,0,0,0.702012795417713,0.297262324577456,1.87467667973554,2.18376766658517,0.283550194484773,0.895585227028483,0,0.383382679165211,15.7652236126702,0,0.207328115540772,0.144119953416961,0.12624243342638,0.888970520090367,3.81988425558278,0,3.4214489204541,4.93571964975953,5.1058319833466,6.5740079505033,0.448524337381443,0,0.2933531432838,1.03417372606222,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,1.30294473717494,0.355391948742546,0,0.602878754119172,1.74306691720059,0.799783929456456,1.2162378064119,0,0,0.479249710983165,0,0,0.723906533337896,0.61642896765115,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0.781952530212746,0,0,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0.496215615637554,0.306923946576125,0,0.256278298511402,0.511707249066704,0.64341568457443,0,0.308419387605311,0.355123450626254,0.492762936082855,0.519254429183621,0,0,1.40354529212299,0.0920809889358963,0.229628896329213,0.364182336013434,0.131124414959424,0,0.462092022626489,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,2.56450125116389,1.96808787419823,4.88067591996455,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.964856007391714,0.214840489736547,0.435050081742686,0.255679882248303,0.356128142586949,0.330569830721956,0.384380134730212,1.78657797492418,0,0,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.571890581771475,0,0.42793898803392,0,0,0.719489830333259,0.54907405947211,0.117812402345686,0,0,0,0,0,3.16950440270266,0,0.424216295861138,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,1.70481688083848,3.10367830158997,0,0.614321404198464,0,0,0,0,0,0,0,0,0.818149460017238,0,0.622079175323615,1.43789361835723,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0,0.341826167541004,0,0,0,0.957003479195758,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.416024019039416,0,0.195984794828755,0.69647365264322,0,1.0319161948297,0.19351266257817,0,0,0,0,0,0.822251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| 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| ||
|short_description=p5@ABL2 | |||
}} | }} |
Latest revision as of 22:10, 18 September 2015
Short description: | p5@ABL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABL2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 52bp_to_ENST00000509520_5end |
EntrezGene: | ABL2 |
HGNC: | 77 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.34e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-28 | 42 |
defensive cell | 3.54e-26 | 48 |
phagocyte | 3.54e-26 | 48 |
macrophage dendritic cell progenitor | 1.07e-22 | 61 |
granulocyte monocyte progenitor cell | 5.29e-22 | 67 |
monopoietic cell | 1.45e-19 | 59 |
monocyte | 1.45e-19 | 59 |
monoblast | 1.45e-19 | 59 |
promonocyte | 1.45e-19 | 59 |
myeloid lineage restricted progenitor cell | 1.27e-18 | 66 |
myeloid leukocyte | 1.61e-16 | 72 |
pigment cell | 1.53e-11 | 14 |
visual pigment cell | 2.18e-11 | 4 |
myeloid cell | 5.97e-11 | 108 |
common myeloid progenitor | 5.97e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 3.48e-09 | 120 |
retinal pigment epithelial cell | 8.18e-09 | 3 |
Schwann cell | 3.22e-08 | 2 |
leukocyte | 2.40e-07 | 136 |
nongranular leukocyte | 4.05e-07 | 115 |
melanocyte | 6.60e-07 | 10 |
melanoblast | 6.60e-07 | 10 |
CD1a-positive Langerhans cell | 7.05e-07 | 2 |
immature CD1a-positive Langerhans cell | 7.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.56e-18 | 76 |
skeletal element | 2.94e-17 | 90 |
bone element | 1.19e-16 | 82 |
immune system | 3.13e-16 | 93 |
skeletal system | 9.21e-15 | 100 |
hemolymphoid system | 6.33e-13 | 108 |
hematopoietic system | 9.00e-13 | 98 |
blood island | 9.00e-13 | 98 |
pigmented layer of retina | 8.18e-09 | 3 |
presumptive retinal pigmented epithelium | 8.18e-09 | 3 |
musculoskeletal system | 2.78e-07 | 167 |