FFCP PHASE1:Hg19::chr1:179112109..179112125,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:179112109..179112125,-
|short_description=p3@ABL2
|description=CAGE_peak_3_at_ABL2_5end
|association_with_transcript=78bp_to_ENST00000509520_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27 | |EntrezGene=27 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=77 | |HGNC=77 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_ENST00000509520_5end | |||
|cluster_id=chr1:179112109..179112125,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_ABL2_5end | |||
|id=chr1:179112109..179112125,- | |||
|ontology_enrichment_celltype=CL:0000548!3.15e-16!679;CL:0000004!3.15e-16!679;CL:0000255!3.15e-16!679;CL:0000012!9.05e-16!682;CL:0000063!3.33e-13!578;CL:0000144!7.28e-12!625;CL:0002057!3.15e-11!42;CL:0002371!8.65e-11!591;CL:0000003!1.74e-10!722;CL:0000860!2.76e-10!45;CL:0002009!9.08e-09!65;CL:0000557!1.09e-08!71;CL:0002194!1.01e-07!63;CL:0000576!1.01e-07!63;CL:0000040!1.01e-07!63;CL:0000559!1.01e-07!63;CL:0000839!2.13e-07!70;CL:0000055!2.71e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-29;33!CL:0002057;1.30e-29;33!CL:0000473;1.13e-21;39!CL:0000234;1.13e-21;39!CL:0000147;4.10e-16;14!CL:0000576;6.74e-12;48!CL:0000148;1.94e-11;10!CL:0000149;8.36e-11;4!CL:0000766;5.88e-09;69!CL:0002586;2.45e-08;3!CL:0002567;3.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.03e-23,42;CL:0002057,1.03e-23,42;CL:0000473,6.03e-22,48;CL:0000234,6.03e-22,48;CL:0002009,1.32e-20,61;CL:0000557,6.44e-20,67;CL:0002194,9.34e-18,59;CL:0000576,9.34e-18,59;CL:0000040,9.34e-18,59;CL:0000559,9.34e-18,59;CL:0000839,7.77e-17,66;CL:0000147,3.24e-16,14;CL:0000766,7.13e-15,72;CL:0000148,1.59e-11,10;CL:0000541,1.59e-11,10;CL:0000149,8.00e-11,4;CL:0000763,1.22e-09,108;CL:0000049,1.22e-09,108;CL:0000219,1.22e-08,386;CL:0002586,2.34e-08,3;CL:0002567,3.07e-08,3;CL:0002031,5.19e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.18e-09!80;UBERON:0001474!5.85e-08!86;UBERON:0004765!2.54e-07!101;UBERON:0001434!2.54e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.45e-08;3!UBERON:0001782;2.45e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.32e-21,76;UBERON:0001474,4.77e-19,82;UBERON:0004765,5.41e-18,90;UBERON:0001434,1.60e-16,100;UBERON:0002405,7.93e-16,93;UBERON:0002390,1.31e-14,98;UBERON:0003061,1.31e-14,98;UBERON:0002193,1.61e-12,108;UBERON:0002204,7.48e-11,167;UBERON:0001782,2.34e-08,3;UBERON:0005424,2.34e-08,3;UBERON:0003081,5.88e-08,203 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0,0,0,0,2.53299878168311,0,0,0.491467873003018,0,0.436882744260345,0,0,0,0,0,2.19093027116212,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0,0,0.142169232487422,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0.755751887377619,0,1.16214518452842,1.6446715520873,10.5300166104335,2.8769239232215,2.0492856522328,13.0065226438722,17.2372840368309,14.846147722428,37.9194162464157,1.12945403725563,0.818718450173537,3.59557575112135,6.12167784741805,17.3301674621091,40.9175760511386,0.329851300186716,0.199463657621632,0,5.22376629531451,11.3477044938228,28.6498234537965,4.01997864410789,0.521482918420201,9.1219314776149,6.05399502633369,22.0966581592539,32.2791635189702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,1.15877215168659,3.9764297352555,3.40644409211845,0.189069634328136,0,0.087834785693126,0,0,0,0.97364218096405,1.21890816109487,0.930705723632056,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0,0,0.71153252537342,0,0.805658634218294,0,0,0.735326160691737,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,15.756692516773,2.0078563452417,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0.704606991862589,0.161872944368132,0.421352420106746,0.204154171254893,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0.340296549480063,1.4351170855109,0,0,5.40163972951924,0.206105058476878,2.83404594050192,0.37223371266318,6.24472429292685,0.292311015483596,1.00973509697646,0,0,8.87523981291536,0.403008392910561,0.339121184620975,1.73934767846967,0.545492241181669,1.72082757233402,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.591534000199219,0.337169380156203,0.482022059766964,0.330881918197182,0.217879444092406,0.71181185733329,0.404493924480493,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,4.39001141634502,1.1240175325762,0.100528972411631,0,0.325808305310325,0,1.44331342025273,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0.93733833986777,2.35174979478403,0.850650583454319,0.358234090811393,0.290633938513962,1.15014803749563,29.5597942737566,0,0.207328115540772,0.144119953416961,0,1.58744735730423,4.96584953225761,2.34434894420094,6.84289784090821,3.29047976650635,23.1264154539816,7.14566081576446,0.112131084345361,0,0.1466765716419,0.775630294546667,0,0,1.06375246633948,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0,2.10833939483032,0.479249710983165,0,0,2.31650090668127,0.410952645100767,1.43248770591916,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0,0.921845842708516,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.739144404124282,0.519254429183621,0.348631135379878,0,1.20303882181971,0.184161977871793,0.229628896329213,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,4.87255237721139,4.92021968549559,6.50756789328606,0,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,0,0.308097234229289,0.15350367472613,0.551346289938122,0,0,0.340906509664404,0.445160178233687,0.330569830721956,0,1.65896526242959,0,0.464845549297286,6.61105928344344,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.719489830333259,0.54907405947211,0.353437207037059,1.2130948894399,0,0,0,0,0,0.136499911407986,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0.35667105148125,0.709522128141196,1.26664581178598,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,1.70481688083848,1.43246690842614,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0.933118762985422,0.808815160325942,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0,0,0,0,4.02156551738102,0.173559738335131,0.195984794828755,0.261177619741208,0,0.51595809741485,0,0,0.0821154570532092,0,0,0,0.822251547880505,0,0,0,0.240476460754601,0,0,0,0.114536596165916,0,0.432164393964449,0.372757606696298,0,0.407712618220842,0.941425616810999,0.509991088181609,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,14.6233029508475,12.3808312729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| ||
|short_description=p3@ABL2 | |||
}} | }} |
Latest revision as of 22:09, 18 September 2015
Short description: | p3@ABL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABL2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 78bp_to_ENST00000509520_5end |
EntrezGene: | ABL2 |
HGNC: | 77 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.03e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-23 | 42 |
defensive cell | 6.03e-22 | 48 |
phagocyte | 6.03e-22 | 48 |
macrophage dendritic cell progenitor | 1.32e-20 | 61 |
granulocyte monocyte progenitor cell | 6.44e-20 | 67 |
monopoietic cell | 9.34e-18 | 59 |
monocyte | 9.34e-18 | 59 |
monoblast | 9.34e-18 | 59 |
promonocyte | 9.34e-18 | 59 |
myeloid lineage restricted progenitor cell | 7.77e-17 | 66 |
pigment cell | 3.24e-16 | 14 |
myeloid leukocyte | 7.13e-15 | 72 |
melanocyte | 1.59e-11 | 10 |
melanoblast | 1.59e-11 | 10 |
visual pigment cell | 8.00e-11 | 4 |
myeloid cell | 1.22e-09 | 108 |
common myeloid progenitor | 1.22e-09 | 108 |
motile cell | 1.22e-08 | 386 |
retinal pigment epithelial cell | 2.34e-08 | 3 |
light melanocyte | 3.07e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 5.19e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.32e-21 | 76 |
bone element | 4.77e-19 | 82 |
skeletal element | 5.41e-18 | 90 |
skeletal system | 1.60e-16 | 100 |
immune system | 7.93e-16 | 93 |
hematopoietic system | 1.31e-14 | 98 |
blood island | 1.31e-14 | 98 |
hemolymphoid system | 1.61e-12 | 108 |
musculoskeletal system | 7.48e-11 | 167 |
pigmented layer of retina | 2.34e-08 | 3 |
presumptive retinal pigmented epithelium | 2.34e-08 | 3 |
lateral plate mesoderm | 5.88e-08 | 203 |